Petromyzon marinus (sea lamprey): 116943158
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Entry
116943158 CDS
T09614
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein L-like isoform X1
KO
K13159
heterogeneous nuclear ribonucleoprotein L
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmrn03041
]
116943158
Spliceosome [BR:
pmrn03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
hnRNP proteins
116943158
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GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_10
RRM_3
DUF4523
Motif
Other DBs
NCBI-GeneID:
116943158
NCBI-ProteinID:
XP_032811642
UniProt:
A0AAJ7WVS5
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Position
17:complement(1556605..1568703)
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AA seq
526 aa
AA seq
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MDDVEHNVSDNYRTAASNNVEDPKKPAPSPVVHIRGLASSADESQVMEALQEFGTVRHVV
MMPHRRQALVEFERLEDARACVAGTAGDPVYVGGQPAYCNFSTSQRISRKGGTPADDVAR
TNHILLLTVNNALYPITTEVIHTICSPYGVVQRIVIFKKNGVQALVEFDSIPSAQQAKSS
LNGADIYSGCCTLKIEYAKPARLNVYRNDSETWDYTLEGPCVPNGQQKKQPALLGDHPST
MRGYGNQQGTYCPQNYSFNNYTSGSPGSPYNHTAEARLGFGNARPTTPMSGPGTCAPHNN
PCPMGGSAANRVMMVYNMNPSVMNCSRLFNLVCLYGNVEKIKFLKSKPGVGMIQMADAAS
VDRAVANLNTAQLFGQKLSLSVSKQQEIVAGQAFELEDGSDSFRDFVGSRHNRFSTHEQA
SKNRILPPSAILHFYSAPPEFSEQAFIQICEETGVKKPNAFKLFSSKNLANTLLTGERTS
SGLAEWDNKNDATEVVAVVNHHQLKNPNGFFAYTLKLCFSSAQQVA
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgtggagcataacgtgagcgacaattatcgcactgcggcgagcaataatgtt
gaggacccaaagaaaccggctccatccccggttgttcacatccggggactggctagctct
gccgatgaatcgcaggtcatggaagccctgcaggaatttggaacggtcagacacgtggtg
atgatgccacaccggcggcaggcgctggtggagtttgagcggcttgaggatgctcgtgcc
tgcgtggcggggacggctggtgaccccgtgtatgtgggtgggcagcccgcctactgcaac
ttctccaccagccagcgcatctcgcgcaagggtggcaccccggccgacgatgtggccagg
accaaccacatcctgctgctcacagtcaacaatgctctgtaccccatcaccaccgaggtg
attcacacgatttgcagcccatatggtgtggtgcagaggattgttatcttcaagaagaat
ggagtgcaggctttagtggagtttgattccatcccaagtgctcagcaagccaagagctcg
ctcaacggagctgatatttactctggatgctgcacattgaagatagaatatgccaagcct
gcacgtctaaatgtgtacaggaatgatagcgagacctgggactacactttggaaggtcct
tgtgtgccgaatggacagcagaagaagcagccagcactgctcggtgaccacccgtccact
atgcgaggatatggaaaccagcaaggaacttactgcccccagaactactcgttcaataac
tacacttctggctctcctggaagcccttacaaccacactgcggaggcacgtttggggttt
ggcaatgcgcgtcccaccacaccgatgagtggaccgggcacctgtgccccccacaacaac
ccatgccccatggggggctcagctgccaaccgcgtgatgatggtgtacaacatgaacccc
agcgtgatgaactgcagccgcctcttcaacctcgtctgtctgtatggcaatgttgagaag
atcaagtttctgaagagcaagcctggcgtcgggatgattcaaatggccgatgcagcttca
gtggatcgtgccgttgcaaacctcaacacggcacagctgtttggccaaaagctcagcctc
tcggtgtcgaagcagcaggagatcgtggcaggccaggcctttgagctggaggatggctcg
gacagtttccgtgactttgtgggctcacgccacaaccgtttctccactcacgagcaggct
tccaagaaccgcattctgccgccgtcggccatcctgcacttctacagcgccccgcctgag
ttttccgagcaggctttcatccagatttgtgaagaaactggcgtgaagaagccaaacgcc
ttcaagctgttttcatccaagaatcttgcgaatacattattgacaggtgaaaggacatcc
tctggtctggcggaatgggacaataaaaacgatgctacagaggtcgtggcggtggtgaac
caccatcagcttaagaatcccaatgggttcttcgcttacacgctgaagctctgcttctcg
tcagcccagcaggtggcatga
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