Petromyzon marinus (sea lamprey): 116943170
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Entry
116943170 CDS
T09614
Name
(RefSeq) calpain-3-like isoform X1
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
116943170
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pmrn01002
]
116943170
Enzymes [BR:
pmrn01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
116943170
Peptidases and inhibitors [BR:
pmrn01002
]
Cysteine peptidases
Family C2: calpain family
116943170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_7
EF-hand_1
EF-hand_8
CAPN13-like_C_EFh
EF-hand_5
GET2
Motif
Other DBs
NCBI-GeneID:
116943170
NCBI-ProteinID:
XP_032811667
EnsemblRapid:
ENSPMAG00000007435
LinkDB
All DBs
Position
17:1895513..1963121
Genome browser
AA seq
895 aa
AA seq
DB search
MPYIFNTRVLPQPRPAPSPTPGHPFMHGSSGNYRNTAISNRNAYLIDTQGKSFEELRTLC
LSHDVLFEDPDFPAHNNSIYFSQNAPMQFQWMRPKDICENPQFIINGATRTDIRQGDLGD
CWVLAAIACMTMNEELLARVIPAGQSFEENYAGIFHFQFWRFGEWVDVVVDDRLPTFNNQ
LVFVQSAERNEFWSALLEKAYAKVHGSYEALKGGNTTEAMEDFTGGVTEYFEMKNPPKDL
YKIMVKATSRRSLMGCSIDDGMCWRCGVPAPDSIGLVRSKCDSCCDEEDHEHEGEHEGEH
EGEHEGEHEGEQDHSHLHPPTQASGGSPLARGFPRTPFSALPDPFSPGPGASSAQGGDIK
FDFPDGGGGGRNLTRDSSVSGPITPKIAMLTHAESRTPMGLVRNHAYSITGLDEVKHRSK
IVQLVRLRNPWGHVEWIGPWSDASKEWNEITPSEKQRLQLISAEDGEFWISFQDFCRNFT
KLEICNLSPDALADDRTNKWTVSVSEGRWVRGCSAGGCRNYPDTFWTNPQYRLQLYDEDD
DPDDNELLCSFIVALMQKNRRKERRQGSTMLTIGFAIYEVTEELRGSREHLPKDFFLYNA
SRARCNSYINLREVTERFRLPPGEYVIVPSTFEAHQEGEFLLRVFAEKHNVSEEMDDIIG
VVGGKKKKKSKKKKNKPIVFISDRTKKGQQQPESPDESEPEDGNEESNKLAEPENPKEPD
LTPEDKQFKTIFKQLAGDDMEVGAADLHNILNKVITKHKDLKTSGFSLESCRTMVALMDT
DLSGKLGYNDFKYLWDKLKFWQQIFRKYDSDKSGSMTSYEMRLAINEAGYQLNNQLYQII
TLRHADENLNIGFDNFIACLIRLEAMFRAFKAFDKDGDGIIRLNVLEWLQLTMYA
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atgccgtacattttcaacacgcgggtgctgcctcagccgaggcccgctccgagcccgacg
cccggccacccgttcatgcacggctcctcggggaactaccgcaacaccgccatcagcaac
cgcaacgcgtacctcatcgacacacagggcaagagcttcgaggagctgcgcaccttgtgc
ctcagccacgacgtgctcttcgaggacccagacttccccgcccacaacaactccatctac
ttcagccagaacgcaccgatgcagttccagtggatgcgtcccaaggacatttgtgaaaac
ccgcagttcatcattaatggggcgacgcgcacagacatacggcagggagacctcggtgac
tgctgggtcctggccgccatcgcttgcatgaccatgaacgaggagctgctggctcgcgtc
atcccggcaggacagagcttcgaggagaactacgccggcatcttccacttccagttctgg
cgttttggcgagtgggtggatgtggtggtggacgatcgactgcccactttcaacaaccaa
ctggtgtttgtgcagtcggccgagcggaatgagttctggagcgccctgctcgagaaggcc
tatgccaaggtccatggctcttacgaggctctgaaaggagggaacacgaccgaggccatg
gaggacttcacgggcggtgtgacggagtactttgagatgaaaaatcctccgaaggatctc
tataagatcatggtgaaggcaacgtcccgccgctcactcatgggctgctccatcgatgat
gggatgtgctggcgctgcggggtcccagctcccgacagcatcggcctcgtccgctccaag
tgcgacagctgctgcgacgaagaggaccacgagcacgagggcgagcacgagggcgagcac
gagggcgagcacgagggcgagcacgagggcgagcaggaccactcgcacctgcaccccccg
acgcaggcgagcggcggctccccgctggcgcgcggcttcccacgcaccccgttctcggcg
ctgccggaccccttctcgccggggcctggagcgtcgtcggcacagggaggcgacatcaag
tttgacttccccgatggaggtggaggaggacgcaacctgaccagggacagcagcgttagc
ggccccatcacgcccaagatcgccatgttgacgcacgcagagtcgcggacgcccatgggg
ctcgtgcgaaaccacgcctactccatcacgggcttggacgaggtgaagcatcgcagcaag
atcgtgcagctggtccgactgcgaaacccatggggtcacgtggagtggatcgggccgtgg
agcgacgcctccaaggagtggaatgaaatcacgccatcggagaagcagcgccttcaactc
atcagcgctgaggacggggagttctggatatccttccaggacttctgccgcaacttcacc
aagctggagatctgcaatctgtcgccggacgcgctcgccgacgaccgcaccaacaagtgg
acggtgtcggtcagcgagggccgctgggtgcgtggctgctcggcgggcggctgccggaac
tacccggataccttctggacgaacccccagtatcgactgcagctctacgacgaagacgat
gaccccgacgacaacgagctgctgtgctccttcatcgtcgcgctcatgcagaagaaccga
cgcaaggagcgcaggcagggcagcaccatgctcaccatcggattcgccatttacgaggtg
accgaggagctgcgtggcagccgggagcacctgcccaaggacttcttcctgtacaacgcg
tcgcgcgcgcgttgcaactcctacatcaacctgcgcgaggtgacggagcggttccgtctg
ccgcccggcgagtacgtcatcgtgccgtccaccttcgaggcgcaccaggagggagagttc
ctgctgcgcgtcttcgccgagaagcacaacgtgtcggaggaaatggacgacatcattggc
gtggttggtggcaagaagaagaagaagagcaagaagaagaaaaataagccaatcgtcttt
atctcggacagaactaagaaagggcagcaacagccggaatctcctgacgagagcgagcca
gaagatggaaacgaggagtcaaataagttggctgaacctgaaaatccaaaggaaccagac
ctgaccccagaggataagcagttcaagacaatcttcaagcagctggccggagacgacatg
gaggtcggtgctgccgacttacataacattctcaacaaagtcataaccaaacacaaagac
ctgaagacgagcggctttagcctggagagctgcaggacaatggtggcactcatggatacg
gacctttcaggaaaactgggctacaatgactttaaatatctctgggataagctcaagttc
tggcagcaaatatttcgcaagtacgattcggacaaatctggttccatgacttcctacgag
atgcgcttggccatcaatgaggccggctaccagctgaacaaccagctctaccaaataatc
acgctgcgtcacgccgacgagaacttgaacattggcttcgacaacttcatcgcctgtctc
ataaggctcgaggcgatgttccgagcattcaaggcctttgataaggatggggatggcatt
atacgtctcaatgttttggagtggctccagctgacaatgtacgcgtaa
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