Petromyzon marinus (sea lamprey): 116943211
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Entry
116943211 CDS
T09614
Name
(RefSeq) syntaxin-5-like
KO
K08490
syntaxin 5
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
116943211
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmrn04131
]
116943211
Membrane trafficking [BR:
pmrn04131
]
SNARE
Syntaxin (Qa)
Stx-cisGolgi
116943211
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNARE
Syntaxin-5_N
PP2C
FlaX
Cep3
YwqH-like
DUF2207_C
DUF5063
DUF6746
FliD_N
SF-assemblin
FlxA
End3
MCPsignal
KASH_CCD
Motif
Other DBs
NCBI-GeneID:
116943211
NCBI-ProteinID:
XP_032811774
UniProt:
A0AAJ7WVR6
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Position
17:complement(4467081..4486051)
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AA seq
365 aa
AA seq
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MNARRRHGPSSTDQGIYLGPKQMFSHSVPAASVPGTFDPARSSLESVPPQAVPTSQSQLG
PPAMGASLGQDRTSEFLAACKSMQGRHNGAYVDGQNNRTLRQMSEFSLMAKRIGRDLSNT
FAKLEKLTFLTKNMSLQDDKSGEIGELTYIIKQDINSLNKQIAQLQAFVRSRGAQNGRHA
HSHASTVVVALQSRLAGMSNEFKSVLEVRTESLRQMQRRKEQFAQSSSMGVPFTQVTGHG
LAATQDDGSLGGQVSIDMDTQRSPQAQLLAKQESYLQERTDAMSAIQSTIVELGSIFQQL
AHMVTEQEETIQRIDSSIEDTQLNVEGAHTEILKYFRSVSSNRWLMIKLFAVLILIFIIV
AMFLG
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgaatgccagacggagacatgggcccagcagtaccgatcagggcatctacttggggccc
aagcagatgttctcgcactccgtcccagcggcctccgtcccaggcacctttgacccggcc
agatcatcgctggaatcggtgcccccgcaggctgtacccacgtcgcagagccagcttggc
ccgccggccatgggcgcgtcgttgggccaggaccggacgtcggaattcttggcagcctgc
aagtccatgcagggcagacataacggagcttatgttgacggccagaacaacagaacgtta
agacagatgagtgaattcagcttaatggccaagcgaattggaagggacttgagcaacaca
tttgccaagctggaaaaactgacgtttttgacgaaaaatatgtcacttcaagatgacaaa
tctggagagattggggaactaacctacatcatcaaacaggacataaacagcctgaacaag
cagatagcacaactgcaggcattcgtgaggagccgcggtgctcaaaatggacggcatgcc
cactctcacgcgagcacggtggtcgtggcactgcagtctcgacttgctggcatgtcaaat
gaattcaaatcggttctggaagttaggacggagagcttgaggcagatgcagaggaggaag
gagcagtttgcccagagttcctcaatgggcgttccattcacgcaggtgacaggacatggc
ctggctgcgacgcaggacgacggctcgctcggggggcaagtctctatcgacatggacacg
cagaggtccccacaggcacaactcttggcaaagcaggagtcgtacttacaggagcgaaca
gatgctatgagtgccattcagtcgaccattgtggagctgggatccattttccagcagctc
gcccacatggtcactgaacaggaggagacgatacaacgaattgactcgagcatagaggac
acacaactcaacgtggaaggcgcccacaccgagattctcaagtattttcgctccgtttcc
tccaaccgatggctcatgattaagctcttcgccgtcctcatcctaattttcatcatcgtc
gcgatgttcttgggctag
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