Petromyzon marinus (sea lamprey): 116943229
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Entry
116943229 CDS
T09614
Symbol
DTL
Name
(RefSeq) denticleless protein homolog
KO
K11790
denticleless
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmrn04121
]
116943229 (DTL)
Ubiquitin system [BR:
pmrn04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
116943229 (DTL)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WDR55
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
WD40_RFWD3
Beta-prop_WDR75_1st
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF12
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
WD_LRWD1
Beta-prop_SCAP
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
116943229
NCBI-ProteinID:
XP_032811805
UniProt:
A0AAJ7WVS7
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Position
17:5512830..5528914
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AA seq
781 aa
AA seq
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MARRSLFESVYNRHILKRNKVGPSSRCPLDSLLLGFECRAPDEHKVFGTAGDPVPAFACP
FSREAGSHHLLAVPSEDGVVQIYDTEKPHKGSRVLKAWLAHSNAVFDCAWMPGESKLVTA
SGDQMAKLWDVCAGEALGSFKGHQCSLKSVAFSQSEKAVFCTGGRDGNIMVWDIRCSKRD
GFYSAVKRIGSAHNAPAKISVTPKRRNTPRGMAPSVDSQQSVTAVIFQDEKTLVSSGAVD
GVIKVWDMRKNYTSYRMGPVPAQSFPYPGSSSRKRGFSSLVLNASSSLLFANCTDDSVYM
FDVAGARTSPVATFRGHLNSSFYVKSSLSPDGEFLLSGSSDDVAYIWKVADPLAEPVLLR
WHSQEVTSVAWCPTDFTKIVTCSDDNKLLIWRLSRGTDQAEDSTGKSDLLARASKSNDHK
RGAHGQAMATPAKPSHGGHAPAHTSPRPAACVLGSSASLPSPSSSESSLQSAATPKDAPL
TPSPAGAPSRLDSASPLGAFSPLSSSGMPSGPSGPSGPSGPSGPSGSRAALATPTSRTPL
SHVQSSATPGGSALLSPGSRTLSITRWLQVAGGASSERKRTGSRRDAAAGPTSGRAKRRL
ETGGGGGGGVDADSSCLSGARCSELCSELCSQVCKRLRPERDEGPTGGDADFARTEDAVV
PGVENFTSSPQSAGVAAVLPPTSDLVTDETGSGRPSPQADSSRRPPESESVNKENQGADR
TPARGAGQGKSKGRAAARSGSLRGKAKGSAEMAQSPDKPSSPTIMMKKISSYFQKSPGVK
P
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtaggtcgctgtttgagagcgtttacaaccgacacatcctgaagcggaacaaa
gtcgggccctcctcgcgctgtcccctcgactccctgctgctgggattcgagtgccgcgca
ccggacgagcacaaggtgttcggcacggcgggcgacccggtgcctgccttcgcatgcccc
ttctcgcgagaggccggtagccatcacctgctggccgtgcccagcgaggacggcgtggtg
cagatctacgacacggagaaaccccacaagggcagcagagtgctcaaagcttggctggct
cattcaaatgccgtcttcgattgcgcctggatgcccggagaatctaagctcgtgacggcc
tcgggggaccagatggccaagctttgggacgtgtgcgctggggaggccctgggttccttc
aaaggtcaccagtgcagcctcaagtcggtggcgttcagccagagcgagaaagcggtcttt
tgcacgggaggaagagatggaaacatcatggtctgggacatcagatgcagcaaaagggac
gggttctacagcgcggtgaagaggatcggcagtgctcacaacgcgcccgccaagatcagc
gtgactccgaagcgccgcaacaccccgcggggcatggctccctccgtggactcccagcag
agcgtcacggccgtgattttccaggacgaaaaaactctcgtctcctctggggccgtagac
ggggtaataaaggtttgggacatgcgcaaaaactacaccagctaccggatgggacccgtg
cctgcgcagtcattcccctatcccggcagcagctcccggaagagagggttctcgagcctc
gtactcaacgcctcgtcctcgcttctcttcgccaactgcacggacgactctgtgtacatg
ttcgacgtggcaggagctaggacgtcgccggtggcgacgtttcggggtcaccttaactcg
tcgttctacgtgaagagcagcctgagccccgacggggagttcctcctcagtggctccagt
gacgacgttgcctacatctggaaggtggcggatccgctggccgagcccgtgctcctgcga
tggcactcgcaggaggtcacctccgtcgcctggtgccccaccgacttcaccaagatcgtg
acttgttcggacgacaacaagctgctgatctggcgactgagtcgtgggactgaccaagct
gaggactccacagggaaatcggacctactggcccgggcgtccaagagcaatgaccataaa
cgcggcgcgcacggccaggccatggccactcctgcaaagccgtcccacggtggccacgcg
ccggcgcacacgtccccacgccccgccgcctgcgtgctgggctcctccgcctcgctgccg
tcccccagctcctccgagtcgtcgctgcagtcggccgccactccgaaggacgctccgctg
accccgagcccggccggcgcgccctccaggctcgattctgcgtctccgctcggcgccttt
tcccccctttcctcctccggcatgccgtccgggccctccggaccgtccgggccctctgga
ccgtccgggccgtcggggtcgcgcgccgccctggccacgccgacgtcgaggacgccgctg
tcccacgtgcagtcttccgcgacgccgggcggttccgcgttgctctcgcccggctctcga
accctctccatcacgcggtggctgcaggtggcgggcggcgcgtcgtcggagaggaagagg
acggggtcgcgccgtgacgccgccgctggaccgacctccgggcgggccaagcgccgcctg
gagacgggcggcggcggcggcggcggcgtggacgcagactcgagctgcttgagcggcgcg
aggtgcagcgagctgtgcagcgagctgtgcagccaagtgtgcaagaggttgaggcccgag
cgtgacgaaggcccgacgggcggcgacgcggatttcgcgcggacggaggacgcggtcgtc
ccgggggtcgagaacttcacgagcagcccgcagtccgccggcgtggcggccgtgctgccg
ccgacctccgacctcgtcacggacgagacggggagcggccgcccctctccccaggccgac
tcgtcacgccgtcccccggagtcggagagcgtgaacaaagagaaccagggcgccgatcgg
acgccggctcggggagcggggcaagggaagagcaagggaagggcggcggcacgctccggg
agcctccgtggcaaagccaagggcagtgctgagatggcgcaatcgccagacaagccttca
agccccaccatcatgatgaagaaaatctccagctacttccagaaatcacctggggtcaag
ccctga
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