KEGG   Petromyzon marinus (sea lamprey): 116943229
Entry
116943229         CDS       T09614                                 
Symbol
DTL
Name
(RefSeq) denticleless protein homolog
  KO
K11790  denticleless
Organism
pmrn  Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:pmrn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pmrn04121]
    116943229 (DTL)
Ubiquitin system [BR:pmrn04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     116943229 (DTL)
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_Prp19 Beta-prop_TEP1_2nd Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 WDR55 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_EIPR1 Beta-prop_RIG_2nd Beta-prop_IFT140_1st WD40_RFWD3 Beta-prop_WDR75_1st Beta-prop_SPT8 Beta-prop_DCAF4 Beta-prop_WDR90_POC16_2nd Beta-prop_DCAF12 Beta-prop_TEP1_C WD40_MABP1-WDR62_1st WD_LRWD1 Beta-prop_SCAP NBCH_WD40
Other DBs
NCBI-GeneID: 116943229
NCBI-ProteinID: XP_032811805
UniProt: A0AAJ7WVS7
LinkDB
Position
17:5512830..5528914
AA seq 781 aa
MARRSLFESVYNRHILKRNKVGPSSRCPLDSLLLGFECRAPDEHKVFGTAGDPVPAFACP
FSREAGSHHLLAVPSEDGVVQIYDTEKPHKGSRVLKAWLAHSNAVFDCAWMPGESKLVTA
SGDQMAKLWDVCAGEALGSFKGHQCSLKSVAFSQSEKAVFCTGGRDGNIMVWDIRCSKRD
GFYSAVKRIGSAHNAPAKISVTPKRRNTPRGMAPSVDSQQSVTAVIFQDEKTLVSSGAVD
GVIKVWDMRKNYTSYRMGPVPAQSFPYPGSSSRKRGFSSLVLNASSSLLFANCTDDSVYM
FDVAGARTSPVATFRGHLNSSFYVKSSLSPDGEFLLSGSSDDVAYIWKVADPLAEPVLLR
WHSQEVTSVAWCPTDFTKIVTCSDDNKLLIWRLSRGTDQAEDSTGKSDLLARASKSNDHK
RGAHGQAMATPAKPSHGGHAPAHTSPRPAACVLGSSASLPSPSSSESSLQSAATPKDAPL
TPSPAGAPSRLDSASPLGAFSPLSSSGMPSGPSGPSGPSGPSGPSGSRAALATPTSRTPL
SHVQSSATPGGSALLSPGSRTLSITRWLQVAGGASSERKRTGSRRDAAAGPTSGRAKRRL
ETGGGGGGGVDADSSCLSGARCSELCSELCSQVCKRLRPERDEGPTGGDADFARTEDAVV
PGVENFTSSPQSAGVAAVLPPTSDLVTDETGSGRPSPQADSSRRPPESESVNKENQGADR
TPARGAGQGKSKGRAAARSGSLRGKAKGSAEMAQSPDKPSSPTIMMKKISSYFQKSPGVK
P
NT seq 2346 nt   +upstreamnt  +downstreamnt
atggctcgtaggtcgctgtttgagagcgtttacaaccgacacatcctgaagcggaacaaa
gtcgggccctcctcgcgctgtcccctcgactccctgctgctgggattcgagtgccgcgca
ccggacgagcacaaggtgttcggcacggcgggcgacccggtgcctgccttcgcatgcccc
ttctcgcgagaggccggtagccatcacctgctggccgtgcccagcgaggacggcgtggtg
cagatctacgacacggagaaaccccacaagggcagcagagtgctcaaagcttggctggct
cattcaaatgccgtcttcgattgcgcctggatgcccggagaatctaagctcgtgacggcc
tcgggggaccagatggccaagctttgggacgtgtgcgctggggaggccctgggttccttc
aaaggtcaccagtgcagcctcaagtcggtggcgttcagccagagcgagaaagcggtcttt
tgcacgggaggaagagatggaaacatcatggtctgggacatcagatgcagcaaaagggac
gggttctacagcgcggtgaagaggatcggcagtgctcacaacgcgcccgccaagatcagc
gtgactccgaagcgccgcaacaccccgcggggcatggctccctccgtggactcccagcag
agcgtcacggccgtgattttccaggacgaaaaaactctcgtctcctctggggccgtagac
ggggtaataaaggtttgggacatgcgcaaaaactacaccagctaccggatgggacccgtg
cctgcgcagtcattcccctatcccggcagcagctcccggaagagagggttctcgagcctc
gtactcaacgcctcgtcctcgcttctcttcgccaactgcacggacgactctgtgtacatg
ttcgacgtggcaggagctaggacgtcgccggtggcgacgtttcggggtcaccttaactcg
tcgttctacgtgaagagcagcctgagccccgacggggagttcctcctcagtggctccagt
gacgacgttgcctacatctggaaggtggcggatccgctggccgagcccgtgctcctgcga
tggcactcgcaggaggtcacctccgtcgcctggtgccccaccgacttcaccaagatcgtg
acttgttcggacgacaacaagctgctgatctggcgactgagtcgtgggactgaccaagct
gaggactccacagggaaatcggacctactggcccgggcgtccaagagcaatgaccataaa
cgcggcgcgcacggccaggccatggccactcctgcaaagccgtcccacggtggccacgcg
ccggcgcacacgtccccacgccccgccgcctgcgtgctgggctcctccgcctcgctgccg
tcccccagctcctccgagtcgtcgctgcagtcggccgccactccgaaggacgctccgctg
accccgagcccggccggcgcgccctccaggctcgattctgcgtctccgctcggcgccttt
tcccccctttcctcctccggcatgccgtccgggccctccggaccgtccgggccctctgga
ccgtccgggccgtcggggtcgcgcgccgccctggccacgccgacgtcgaggacgccgctg
tcccacgtgcagtcttccgcgacgccgggcggttccgcgttgctctcgcccggctctcga
accctctccatcacgcggtggctgcaggtggcgggcggcgcgtcgtcggagaggaagagg
acggggtcgcgccgtgacgccgccgctggaccgacctccgggcgggccaagcgccgcctg
gagacgggcggcggcggcggcggcggcgtggacgcagactcgagctgcttgagcggcgcg
aggtgcagcgagctgtgcagcgagctgtgcagccaagtgtgcaagaggttgaggcccgag
cgtgacgaaggcccgacgggcggcgacgcggatttcgcgcggacggaggacgcggtcgtc
ccgggggtcgagaacttcacgagcagcccgcagtccgccggcgtggcggccgtgctgccg
ccgacctccgacctcgtcacggacgagacggggagcggccgcccctctccccaggccgac
tcgtcacgccgtcccccggagtcggagagcgtgaacaaagagaaccagggcgccgatcgg
acgccggctcggggagcggggcaagggaagagcaagggaagggcggcggcacgctccggg
agcctccgtggcaaagccaagggcagtgctgagatggcgcaatcgccagacaagccttca
agccccaccatcatgatgaagaaaatctccagctacttccagaaatcacctggggtcaag
ccctga

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