Petromyzon marinus (sea lamprey): 116943240
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Entry
116943240 CDS
T09614
Name
(RefSeq) thyroid transcription factor 1-like isoform X1
KO
K09342
homeobox protein Nkx-2.1
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmrn03000
]
116943240
Transcription factors [BR:
pmrn03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
116943240
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GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Prp31_C
TFIIA
Neuro_bHLH
Motif
Other DBs
NCBI-GeneID:
116943240
NCBI-ProteinID:
XP_032811827
UniProt:
A0AAJ7T5W6
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Position
17:6555316..6558796
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AA seq
420 aa
AA seq
DB search
MSMSPKHSTPFSVTDILSPMEESYRKVAMEVPLHSGMHGAGGVGGAGYRAASTGPVIGNI
SGGGGVLVGQSMHVGHAQAQQQQQQQGAPTSAAAAAAAAAAAYHMPQLPHHHHHHHHAAH
AAHVNSAAYCNGALGGVHAAMGELPPYQDGMRGAGAGGGWYGANADPRYSTSEYEFSRFM
STSSGMNMGGMNAYGGMGGDAGKVLAPLVSTPRRKRRVLFSQAQVYELERRFKQQKYLSA
PEREHLASMIHLTPTQVKIWFQNHRYKMKRQAKDKVSQQLQQDGAGGGGQQQQSPRRVAV
PVLVKDGKPCPGGTGVSAQGTSNHHHQQQQQQQGHHHNHSNHHQQHQQQQGAGGVISGGG
TASSLIQQTEQGVELVQVEAPLSPSDLHTAVASMASMTSPVAEYNMVMSAGSTLLYGRTW
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgagcccgaagcattctactcccttctcggtgacagacatcctcagcccgatg
gaggagagctacaggaaggtggccatggaggtgccgctccactcgggcatgcacggggcg
ggcggcgtcggcggcgcgggctaccgcgcggcgtcgacggggccggtgatcggcaacatc
agcggcggcggcggcgtgctggtgggccagtcgatgcacgtgggacacgcgcaggcccag
cagcagcagcagcagcagggcgctccgacgtccgcggcggcggcggcggcggcggcggcg
gcggcctaccacatgccgcagctgccgcaccaccaccaccaccaccaccacgcggcccac
gcggcccacgtgaacagcgccgcgtactgcaacggcgcgctgggcggagtgcacgccgcc
atgggggaactgccaccgtaccaggatggcatgcgaggcgccggcgccggaggaggctgg
tacggcgccaacgccgatcccagatattccaccagtgagtacgagttctcgcgtttcatg
agcacgtcgtccggcatgaacatgggagggatgaacgcgtacggaggcatgggcggcgac
gccggcaaggtcctggccccgctcgtctcgacgccgcggcgcaagcggcgggtgctcttc
tcgcaggcgcaggtctacgagctggagcgccgcttcaagcagcagaagtacctctcggcg
cccgagcgcgagcacctcgccagcatgatccacctcaccccgacgcaggtcaagatctgg
ttccagaaccaccgctacaagatgaagcgccaggccaaggacaaggtgtcgcagcagctg
cagcaggacggcgccggcggcggcgggcagcagcagcagtcgcctcgccgcgtcgccgtg
ccggtgctcgtcaaggacggcaagccgtgccccggcggaaccggcgtctccgcgcagggc
acgtccaaccaccaccaccagcagcagcagcagcagcagggccatcaccacaaccacagc
aaccaccaccagcagcaccagcagcagcaaggggcgggaggcgtcatatcgggcggcggc
accgcctcgtcgctcatccagcagacggagcagggcgtggagctggtgcaggtggaggcg
ccgctcagcccctccgacctccacacggccgtggcctcgatggcgtccatgacgtcgccg
gtggccgagtacaacatggtgatgtcggcgggctccactctcctatatggcaggacgtgg
tga
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