Petromyzon marinus (sea lamprey): 116943326
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Entry
116943326 CDS
T09614
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1-like isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04517
IgSF CAM signaling
pmrn04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
116943326
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
116943326
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pmrn04812
]
116943326
Cytoskeleton proteins [BR:
pmrn04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
116943326
Intermediate filaments
Intermediate filament-binding proteins
116943326
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
COG3_N
Sec3_CC
DYH2-5-8_CC
Y4lK
Motif
Other DBs
NCBI-GeneID:
116943326
NCBI-ProteinID:
XP_032812008
UniProt:
A0AAJ7T715
LinkDB
All DBs
Position
17:complement(11116467..11269668)
Genome browser
AA seq
2374 aa
AA seq
DB search
MMSATAEPQYDNVESSQQHQQHQQQQFVEANNRWDLMEEDWDNENSSARLFERSRIKALA
DEREVVQKKTFTKWVNSHLARVSCRISDLYLDLRDGRMLIKLLEVLSGERLPKPTKGKMR
IHCLENVDKSLQFLKEQKVHLENMGSHDIVDGNHRLILGLIWTIILRFQIQDIHVETEDN
RETKSAKDALLLWCQMKTAGYPNVNIHNFSTSWRDGLAFNALIHKHRPDLIDYERLKKSN
AHHNLQNAFNLAEQKLGLTKLLDPEDINVDQPDEKSIITYVVTFYHYFSKMKALAVEGKR
IGKVLDNAIETDKMITKYESLASELLQWIEQTIMVLNNRKFVNSLTGVQQQLQAFNTYRT
VEKPPKFMEKGNLEVQLFTIQSKMRANNQIVYTPRDGKLISDINKAWERLEKAEHERELA
LRDELIRQEKLEQLARRFDRKAAMREAWLSENQRLVAQDNFGFDLPAVEAATKKHEAIET
DIAAYEERVLTVVDVARELEAEDYHDVRRITARRDNVLRLWDYLLELLRARRRRLEVNLA
LQRVFQEMLHIMDWMDEMKVRLLSQDYGKHLLGVEDLLQKHALVESDIGVQAERVRSVNA
TAYKFADNDEAYKPCDPQIILERVGHLEYCYRELAALAAERRARLEDSRRLWQHLWELEE
DEAWMREQEPALASAELGRDLTSTLRLAAAQRALEDEMGGRRARLSLTVAGGEELARQGH
PGADRIRARSAEVQEQWARLEDLARLRRERLQEALALYQFQADADDMEAWIAEVFRLVSS
DEVGTDEYSTQALVKKHRDVTEEIAQHRSALDGLYEMTQSLPAEAANSPEIRDRLETIEG
EYRDLVELVLVRKQRLQDALALYTMYSEADACELWIDEKEKWLDAIVIPERLEDLEVVQH
RFDSLEPEMNGQASRVATVNDIAQQLANTGHPSEGDVRQRQDNLNKRWALFRELVERKKG
GLYSVLSVQNYFFEVTETMAWIREKTKVIELTAEPGSDLAAVMALQRKLTGMERDLTAIQ
AKMGDLQTESERLIVEHPEQADAIRQRLNDNLEVWDELQRTLRSREASLGETSKLQQFLQ
ALDDFQAWLSRTQMAIASDELPSSLPEAETQLAQLEGLRNEIDNNQEEFQRVRDMGALLT
QDPSDPQHGQLQEQLQSLDAGWDDVQALWESRHRQLTQAHGFQTFLRDAKQTEVFLTNQE
YALSHAEMPRTLEGAEAAIKKHDNFMNSMDANDERIHGVTELGARLVGDGNVNADKVSDK
VDTIQEWARRNREVAGDVLLRLRDNRDLQKFLQECRELTFWVNEKMLTAQDTSYDEARNL
HSKWLKHQAFMAELASNKEWLEKIKKDGEALMTEKPETEPVVRRELAELQRLWRELESTT
QAKAQRLFDANKAELFTQSCADLDKWIGELESHTQSDEYGKDLTGVNILLKKHQMIENQM
EVRKREVEELQTQASALRQEGQSPDEADGLERVVVVRLHQVMQPLQQRKGKLLASKEVHQ
FNRDLEDEILWIDDHMPLASSTDHGHNLQTVQLLMKKNQTLQKEMQGHEPWVHDVCERGE
RLAADGGPDAAEVRARIGTLRDLWARLATEAERRQGRLQEALQAQQYYFDAAEAEAWMSE
QELYMMGDEKAKDEQSAVAMIKKHQNLEQAVENYAENVHQLSEISRRLISDGHPESERIG
LRQSQVDRLYAGLKDLAEERRGRLEEWQKLFVLNREVDDLEQWIAEREVVAGSHELGQDY
DHVTMLQDRFRVFARDTVLIGQERVQAANEMVDEMIDSGHPDAASIADWKDGLNEAWADL
LELIDTRTQVLAASFELHRFLQQAREVLGRVTEKHQQLSDDLGRDQHLVESLQRMHAAFE
HDIQTLGSQVKQIEEDAARLQTAYAGEKAEDIARREREVAEAWRALLDACGERRVRLVDT
SDKLRFFRMVRDLLLWMEGVRRQIDAQESPRDVSSVELLMNSHQGIKAEIDTRNDSFAAC
VELGQALLQRQHFASAEINEKLIELTEKRKEMIDKWEERWEWLKLILEVHQFARDASVAE
AWLLSQEPYLSSREIGLSVDDVEKLIKRHEAFDKSALTWDERFGALQKLTTLELLELRRR
QEEEDDLERKRLSPPQPSEEFQTREAGDAHAVQNGVAAAEVESAAKAAAEGADGLANGSE
GRARRARESPPPSPEGERRGLASPPLAPHTSASLPAKPSEVLMLPTEGFLHRKHEWEASN
KKANSRSWNNVYCVLSTGHMAFYKDPKSASTGVTFHSEIPLPLSGSSCEVASDYKKRKHV
FKLRLEDGNEFLFQAKDDDEMNGWINSVSSAIVGVRAEASGGPGGGAGGGAGGAGDVARA
QTLPATAVSGAGDASPGKREKDKEKRFSLFGKKK
NT seq
7125 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcggccacagcggaaccgcagtacgacaatgtggagagcagccagcagcaccag
cagcaccagcagcagcagtttgtcgaggcgaacaaccgctgggacctcatggaggaggac
tgggacaacgagaacagctcggcgaggctgttcgagcgctcgcgcatcaaggccctcgca
gacgagcgcgaggtcgtgcagaagaagaccttcaccaagtgggtgaactcgcacctggcc
cgcgtctcgtgccgcatcagcgacctgtacctggacctgcgcgatggacgcatgctcatc
aagctcctcgaagttctgtccggggagaggctgccgaagccgaccaagggcaagatgcgg
atccactgcctggagaacgtggacaagtccctgcagttcctcaaggagcagaaggtccac
ctggagaacatgggctcacacgacatcgtggacggcaatcaccgcctcatcctgggcctc
atctggaccatcatcctccgcttccagatccaggatattcacgttgagaccgaggacaac
agagagaccaagtcagccaaggacgctctgctgctgtggtgtcagatgaaaacggccggg
taccccaacgtgaacatccacaacttcagcacgagctggagggacggcctggccttcaac
gcgctcatccacaagcaccggcccgacctgattgactacgagcggctcaagaagtccaac
gctcaccacaacctgcagaatgccttcaacctcgccgagcagaagctggggctcacgaag
ctgctcgatcccgaagatatcaacgtggaccaaccggacgagaagtccatcatcacctat
gtcgtcaccttctaccactacttctccaagatgaaggccctggccgtcgagggcaaacgc
atcggcaaggttttggacaacgctatcgagacggacaagatgatcaccaagtacgagtcg
ctggcctccgagctgctgcagtggatcgagcagaccatcatggtgctcaacaatcgcaag
ttcgtcaactccctgacgggagtgcagcagcagctacaggccttcaacacctaccgcacg
gtggagaagccgcccaagttcatggagaagggcaacctggaggtgcagctgttcacgatc
cagagcaagatgagggccaacaaccagatcgtgtacacgccgcgcgacggcaagctcatc
tccgacatcaacaaggcgtgggagcggctggagaaggcggagcacgagcgggagctggcg
ctgcgcgacgagctcatccgccaggagaagctcgagcagctggcgcggcgcttcgaccgc
aaggcggcgatgcgcgaggcctggctcagcgagaaccagcggctcgtcgcgcaggacaac
ttcggcttcgacctgccggcggtggaggcggccacgaagaagcacgaggcgatcgagacg
gacatcgcggcctacgaggagcgcgtgctcaccgtggtggacgtggcacgcgagctggag
gcggaggactaccatgacgtgcggcgcatcacggcccgccgggacaacgtcctccgcctc
tgggactacttgctggagctgctgcgtgcccggcgccgccggctcgaagtcaacttggcg
ctacagcgagtcttccaggagatgctgcacatcatggactggatggacgagatgaaggtg
cggctgctgtcccaggactacggcaagcacctgctgggcgtggaggacctcctgcagaag
cacgctcttgtcgagtcggacatcggcgtgcaggcggagcgcgtgcgctccgtcaacgcc
accgcgtacaagttcgccgacaacgacgaggcgtacaagccgtgcgacccgcagatcatc
ctggagcgcgtgggccacctcgagtactgctaccgggagctggcggcgctggcggcggag
cggcgcgcccgcctcgaggactcccgccgcctctggcagcacctgtgggagctggaggag
gacgaggcgtggatgcgcgagcaggagccggcgctcgcctccgccgagctggggcgcgac
ctcacgtccacgctgcggctggcggcggcgcagcgcgccctcgaggacgagatgggcggg
cggcgcgcccggctgtcgctcaccgtggccggcggggaggagctggcgcgccagggccac
ccgggcgccgaccgcatccgggcgcgctccgccgaggtgcaggagcagtgggcgcgcctc
gaggacctcgccaggctgcggcgcgagcggcttcaggaggcgctagcgctctaccagttc
caggcggacgccgacgacatggaggcgtggatcgccgaggtgttccgcctcgtgtcgagc
gacgaggtgggcacggacgagtactcgacgcaggcgctcgtcaagaagcaccgtgacgtc
accgaggagatcgcgcagcaccggtcggcgctggacggcctctacgagatgacgcaatcg
ctgccggccgaggcggccaactcccccgagatccgcgaccgcctggagacgatcgagggc
gagtaccgcgacctcgtggagttggtgctcgtgcgcaagcagcggctgcaggacgcgctg
gcgctctacaccatgtacagcgaggcggacgcctgcgagctgtggatcgacgagaaggag
aagtggctcgacgccatagtcatccccgagcgcctggaggacctggaggtggtgcagcac
aggttcgatagcttggagccggagatgaacgggcaagcgtcgcgcgtcgccacggtaaac
gacatcgctcagcagctcgccaacacgggtcacccgagcgagggcgacgtccgccaacgc
caggacaacctcaacaagcggtgggcgctcttccgcgagctggtggagaggaagaagggc
ggtctctactcggtgctgagcgtccagaattacttcttcgaagtgaccgagaccatggcc
tggatccgtgagaagaccaaggtgatcgagctgaccgccgagccggggagcgacctcgcg
gcggtcatggccctgcagcgcaagctcacggggatggagcgtgacctcactgccatccag
gcgaagatgggcgacctgcagacggagtcggagcgcctcattgtggagcacccggagcag
gcggacgccatccgccagcgcctcaacgacaacctggaggtgtgggacgagctgcagcgc
acgctgcgctcgcgcgaggcttcgctgggcgagacgagcaagctgcagcagttcctgcag
gcgctcgacgacttccaggcgtggctgtcgcgcacgcagatggccatcgccagcgacgag
ctgccctccagcctgcccgaggccgagacgcagctggcgcagctcgagggcctgcgcaac
gagatcgacaacaaccaggaggagttccagcgggtgagggacatgggcgcgctgctcacg
caagacccgagcgacccgcagcacgggcagctgcaggagcagctgcagtcgctcgacgcc
ggctgggacgacgtccaggcgctgtgggagagccgccaccggcagctcacgcaggcgcac
ggcttccagacgttcctgcgcgatgccaagcagaccgaggtgttcctcaccaaccaggag
tacgcgctgagccacgcggagatgccgcggacgctggagggcgccgaggcggccatcaag
aagcacgacaacttcatgaacagcatggacgccaacgacgagcgcatccacggcgtcacc
gagctgggcgctcgcctcgtcggtgacggcaacgtcaacgcggacaaggtctccgacaag
gtggacaccatccaggaatgggcgaggaggaaccgtgaggtggctggggacgtcctgttg
aggctcagggacaacagggacctccagaagttccttcaggagtgccgcgagctgacgttc
tgggtgaacgagaagatgctgacggcgcaggacacgtcgtacgacgaggccaggaacctc
cactccaagtggctcaagcaccaggccttcatggctgagctggcctccaacaaggagtgg
ctggagaagatcaagaaggacggcgaagcgctgatgacggagaagcccgagacggagccc
gtcgtgcggcgggagctcgcagagctgcagcggctgtggcgagagctcgagtccaccacg
caggccaaggcgcagcgcctcttcgacgccaacaaggcggagctgttcacgcagagctgc
gccgacctcgacaagtggatcggggagctcgagtcgcacacgcagtcggacgagtacggg
aaggacctcaccggcgtcaacatcctgctcaagaagcaccagatgatcgagaaccagatg
gaggtgcgcaagcgcgaggtggaggagctgcagacgcaggcgtcggcgctgcgccaggag
ggccagagccccgacgaagcggacggcctggagcgcgtggtggtggtgcggctccaccag
gtcatgcagcccctgcagcagaggaagggcaagctgctcgcatcgaaggaggtccaccag
ttcaaccgcgacctggaggacgagattctctggatagatgatcacatgcccctggcgtcg
tcgaccgaccacgggcacaacctccagaccgtgcagctgctcatgaagaaaaaccagacc
ctgcagaaggagatgcagggccacgagccgtgggtgcacgacgtgtgcgagcgcggggag
cggctggccgcggacggcgggcctgacgcggccgaggtgcgcgcgcgcatcggcacgctg
cgcgacctctgggccaggctggcgacggaggccgagcggcggcagggccgcctgcaggag
gccctgcaggcgcagcagtactacttcgacgcggccgaggcggaggcgtggatgagcgag
caggagctgtacatgatgggcgacgagaaggccaaggacgagcagagcgccgtggccatg
atcaagaagcaccagaacctggagcaggccgtggagaactacgcagagaacgtgcaccag
ctgtcggagatctcgcggagactcatctccgacgggcaccccgagagtgaacggatcggc
cttcgacagtcgcaagtggaccggctgtacgcgggcctcaaggacctggcggaggagcgg
cgcggccgcctggaggagtggcagaagctgttcgtgctcaaccgcgaggtggacgacctg
gagcagtggatcgccgagcgcgaggtggtggccggctcgcacgagctcggccaggactac
gaccacgtgacgatgctgcaggaccgcttccgcgtgttcgcgcgcgacacggtgctcatc
ggccaggagcgcgtgcaggccgccaacgagatggtggacgagatgatcgacagcggccac
cccgacgccgcctccatcgccgattggaaggacggcctcaacgaggcgtgggccgacctc
ctggagctcatcgacactcgcacgcaggtgctggcggcgtcgttcgagctgcaccggttc
ctgcagcaggcgcgcgaggtgctcggtcgcgtcaccgagaagcaccagcagctgtcggac
gacctgggccgcgaccagcacttggtggagagcctccaacgcatgcacgccgccttcgag
cacgacatacagacgctcggctcgcaggtgaagcagatcgaggaggacgcggcgcggctg
cagacggcgtacgcgggcgagaaggcggaggacatcgcgcggcgcgagcgcgaggtggcg
gaggcgtggcgggcgctgctggacgcgtgcggcgagcggcgcgtgcgcctcgtggacacg
tcggacaagctgcgcttcttccgcatggtgcgcgacctcctgctctggatggagggcgtg
cggcgacagatcgacgcgcaggagagcccccgggatgtgtcgtccgtggagctgctcatg
aacagccaccagggcatcaaggccgagatcgacactcgcaacgacagcttcgccgcctgc
gtcgagctgggccaggcgctgctgcagcgccagcacttcgcttccgcagagatcaatgag
aaactgatcgagctgacggagaagaggaaggagatgattgacaagtgggaggagcgatgg
gagtggctgaagctcatcctggaggtgcaccagtttgcccgcgacgcgtctgtggctgag
gcgtggctgctgagccaggagccgtacctgtcgagccgcgagattggcctcagcgtggac
gacgtggagaagctcatcaagcggcacgaggccttcgacaagtcggcgctcacttgggac
gagcgcttcggggcgctgcagaagctcacgacgctggagctgctggagttgcgtcgtcgg
caggaggaggaggatgacctggagaggaagagactctcacctcctcaacccagcgaggaa
ttccagaccagagaagctggagatgcgcatgccgtgcaaaacggagtcgcggcggccgaa
gtcgagtcggcggcaaaggcggccgcggagggtgcggacgggctggccaacggctccgaa
ggccgggcgcggcgggcgagggagagccccccgccatcgcccgagggggagaggaggggc
ctcgcgtcgccgccgctggcgccgcacacctcggcgagcctcccggccaagcccagcgag
gtgctcatgctgcccacggagggcttcctgcaccgtaagcacgagtgggaggcgagcaac
aagaaggccaacagcaggtcatggaacaacgtgtactgcgtgctgagcaccggtcacatg
gctttttacaaggaccccaagagcgccagcacgggggtcacgttccacagcgagatcccc
ctgcctctgtcgggctcctcgtgcgaggtggcgtccgactacaagaagcgcaagcatgtc
ttcaagctgcggctcgaggatggaaatgaattcctgttccaagccaaggatgatgacgag
atgaacggctggatcaacagtgtgagcagcgccatcgtcggggtgcgggcggaggcgagc
ggcggccctggcggcggcgctggcggcggcgctggcggtgcaggcgacgtggctcgggcg
cagacgctgcctgcgacggccgtgagcggcgccggcgacgccagccccggcaagcgcgag
aaggacaaggagaagcgcttcagcctgttcggcaagaagaaatga
DBGET
integrated database retrieval system
