Petromyzon marinus (sea lamprey): 116943481
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Entry
116943481 CDS
T09614
Symbol
PCDH9
Name
(RefSeq) protocadherin-9 isoform X1
KO
K16498
protocadherin delta 1
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
116943481 (PCDH9)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pmrn01009
]
116943481 (PCDH9)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pmrn04515
]
116943481 (PCDH9)
Protein phosphatases and associated proteins [BR:
pmrn01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
116943481 (PCDH9)
Cell adhesion molecules [BR:
pmrn04515
]
Cadherins
Protocadherins
116943481 (PCDH9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
HTH_19
Ctr
MAP17
RCR
DUF6479
Motif
Other DBs
NCBI-GeneID:
116943481
NCBI-ProteinID:
XP_032812185
UniProt:
A0AAJ7T6K7
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All DBs
Position
18:complement(8302539..8434395)
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AA seq
1355 aa
AA seq
DB search
MREPTGERLRPPPPPLLMLLLLLSLVPGRADEVNYRVFEELPANKLIGNLARDLNLRALG
PGLTYKIVSKYEGSPLVRVRNDTGELFTTATRIDREQLCPDVADEEAGCYHEVQVVVLPN
QYFRLIKVKILVEDINDNVPSFPSPVINLTIAENMPVGTRFSLQAAGDPDAGLNGIQRYA
LTDTGNAFTLEVIEGADGEKSPQLLIRGSLDRERKEVYEMKLKAEDGGDPPRSSTAILRV
TVTDVNDNHPVFEQSQIEVKIPENTPIGTPVIQLRATDADLGSNAEVTYSYSGRVSAPAR
RLFQLDNLTGVITVRGPLDREDTALYRLVVLATDRGPNPVPATATVTVSVADVNDNAPSV
AVHDIISPVDGVIHLTEAAPPNTPIALIEVSDPDLEQNGRVTCRIEGDVPFQLKPAYQNH
ENQFLLETSALLDFETKNEYSVRLVATDLGSPRMSSTATVVVRLRDENDNPPVFSPGVVE
ATAYENNAPGAQIVTLAAGDRDSGKNAQMHYYLGPDAPPAFRLNPTTGVLSVAEPLDREE
RNLYRFSVIARDNGAPSMHGNATVVIRVLDQNDNPPKFNNKEFNFFLSENLPRFGTVGVI
SVTDADEGKNALVTFSLVGNSDIFTINPVTGMIQSNISFDREQKPSYTFQVQAVDAGEPP
KTSLAKVTIHIMDINDNAPTVLLPPSNASYRLVTPSTSPGTSVAEVMATDIDSGENAELS
YSVVGGNPFNLFAIDQATGNITLTQKLLPAHQGLHRLVVRVNDAGFPESLYSIVLVNLFV
NETVGNASYVQELITKSLKLPLDVDVIGDGLTQSDINRYTTIIAMVAGAMIVIILVIVVV
LFLRCRGNRMKSGVCRSKENENWLSPSQQDKQSKNRKKKRKKKQQQQQSQVKTAPYSIVT
IEEPKSDDPTYQTINETLEELEVDCRTIPRHNTFRPDRTSDSPDLAKHYRSTSPQMAVSP
HAHTPPLSKNQNVIQELPADNTFVGLGGESTSKRSSTSSDHFSVSESSSQSGFRANVQKL
TKQQQQQQQQQQQQQASRRVKFMLEDGGTRQECCDSSLQSVADSGLGDPEATTTTATTAA
ASSGSSASTASMASTSAGATGAGILGVAGTAVGPAGPGGVLAGGLSAAGAAKLPGSQLMA
PLLADSHYERTTPDGCTGETDHHPENGPAVVPARAALQTPIVVAKDLPDVALPSMCSTCT
PECQMYGHSDNCWMPAGGVGGEGTAKSGSQLSPLSSYPGPLHRPEWDRRDLVPNGSALFH
HGGPSGGVVGVGAGGGSGNGGGGGGGDAVGGVGKPSSTSNRQANSYYNAFYSNNYRRHND
FLNEAEEIPLARPQAYRPATISTMSSPDFNKELYL
NT seq
4068 nt
NT seq
+upstream
nt +downstream
nt
atgagggaacccacgggcgagcggctgcggccgccgccgccgccgctgctgatgctgctt
ttgctgctgtccctggtgcccggacgcgccgatgaagtaaattaccgcgtgttcgaggag
cttcccgcgaacaagctgatcgggaacctggcacgggatctgaacctgcgagccctgggg
cccggcctcacctacaagatagtttccaagtacgagggctcgccgctcgtgcgcgtgcgc
aacgacaccggggagctgttcacgacggcgacgcgcatcgaccgtgagcagctgtgcccc
gacgtggcggacgaggaggccggctgctaccacgaggtgcaggtggtcgtgctgccgaac
cagtacttcaggctcatcaaggtgaagatcctcgtggaggacatcaacgacaacgtgccc
agcttcccgtcgcccgtcatcaacctcaccatcgccgagaacatgcccgtgggcacgcgg
ttctcgctgcaggccgccggcgacccggacgccggactcaacggcatccagcggtacgcg
ctcaccgacacgggcaacgccttcacgctcgaggtgatagagggtgccgacggggagaaa
tcgccgcagctgctcatccgcggcagcctggaccgcgagcgcaaggaggtgtacgagatg
aagctgaaggcggaggacgggggagacccgccgcgctccagcactgccatcctgcgcgtg
accgtcacggacgtgaacgacaaccaccccgtgttcgagcagtcgcagatcgaggtgaaa
atcccggagaacacccccatcggcaccccggtcatccaactgcgcgccaccgacgcggac
ctgggctcgaacgccgaggtgacgtactcgtacagcggccgcgtgtcggcgccggcgcgt
cgcctcttccagctggacaacctgacgggcgtgatcacggtgcgcgggcccctcgaccga
gaagacacggcgctctaccgtctcgtcgtgctggccacggaccgaggccccaaccccgtg
ccggccaccgccacggtcaccgtgtccgtggccgacgtgaacgacaacgcgccctccgtg
gcggtgcacgacatcatctcgcccgtggacggcgtcatccacctgacggaggcggctcct
cccaacacgcccatcgccctcatcgaggtgagcgaccccgacctggagcagaacggccgc
gtcacgtgccgcatcgagggcgacgttcccttccagctgaagcccgcctaccagaaccac
gagaaccagttcctgctcgagacctcggccctgctcgacttcgagacgaagaacgagtac
agcgtgcgtctcgtcgccaccgacttgggctcgccgcgcatgtcgagcacggcgacggtg
gtggtgcggctgcgggacgagaacgacaacccgcccgtgttcagcccgggcgtggtggag
gccacggcctacgagaacaacgcgcccggcgcgcagatcgtcacgctggccgcgggcgac
agggacagcggcaagaacgcgcagatgcactactacctggggcccgacgcgccgcccgcc
ttcaggttgaaccctaccacgggggtgctgtccgtggccgagcccctggacagggaggag
aggaacctgtaccgcttctccgtgatcgccagggacaacggcgcaccctccatgcacggc
aacgccacggtggtcatccgtgtgctcgaccagaacgacaacccgcccaagttcaacaac
aaagagttcaatttcttcctctccgagaacctgccgcgcttcggcacggtgggcgtcatc
agcgtgacggacgcggacgagggaaagaacgccctggtcaccttctcgctggtgggcaac
agcgacatcttcaccatcaacccggtgacgggcatgatccagtccaacatctctttcgac
agggagcagaagccctcctacacgttccaggtgcaggccgtggacgccggagagccgccc
aagacctcgctggccaaggtgaccatccacatcatggacatcaacgacaacgcgcccacg
gtgctgctgccaccctccaacgcctcataccgcctcgtgacgccgtccacctcgccgggc
acctcggtggccgaggtgatggcaacggacatcgactcgggcgagaacgcggagctgtcg
tacagcgtggtgggaggaaaccccttcaacctgttcgccatcgaccaggcgacgggcaac
atcacgctcacgcagaagctgctgcccgctcaccaggggctgcacaggctcgtggtgagg
gtgaacgacgccggcttccccgagtcgctctacagcatcgtgctcgtgaacctgttcgtg
aacgagacggtgggcaacgcgtcctacgtgcaggagctcatcaccaagagcctcaagttg
cccctggacgtggacgtgatcggcgacggcctgacccagtcggacatcaaccgctacacg
accatcatcgccatggtggcgggggcgatgatcgtcatcatcctggtcatcgtggtggtg
ctcttcctgcgctgccgcggcaacaggatgaagagcggcgtgtgtcgcagcaaggagaac
gagaattggctgtcgccaagccagcaggacaagcagagcaagaatcgcaagaagaagcgg
aagaaaaagcagcagcagcaacagagccaggtgaagacggcgccctacagcatcgtgacc
atcgaggagcccaagtcggacgacccgacctaccagaccatcaacgagaccctggaggag
ctggaggtggactgccgcaccatcccgaggcacaacaccttcaggcccgaccgcacgagc
gacagcccggacctggcgaagcactaccgctccacgtcgccccagatggccgtgtctccg
cacgcgcacacgccgccgctgtccaagaaccagaacgtgatccaggagctgccggcggac
aacactttcgtggggctaggcggcgagtcgacgtccaagcgctcgtccacgagctcggac
cacttcagcgtgtccgagagcagctcgcagagcggcttcagagccaacgtccagaagctc
accaagcagcaacagcagcaacagcagcagcaacagcagcagcaggcttcgcgacgggtg
aagttcatgctggaggatggcggcacccgccaagagtgctgcgactcatcactgcagagc
gtggcggacagtggcctcggggatcccgaggccaccaccaccacggcgaccaccgcggcc
gccagcagcggcagcagcgctagcacggccagcatggccagcaccagcgccggagccacg
ggggccggcatcctcggcgtcgcggggacagcggtgggcccggccgggcccggcggcgtc
ctggccggcgggctgtccgccgcgggggcggccaagctgccggggtctcagctgatggcg
ccgctgctcgccgattcccactacgagcgcacgacgccggacggatgcaccggtgagacc
gatcaccaccccgaaaacggacctgcggtggttccagcgcgcgccgccctgcagactccc
atcgtggtggccaaggacctcccggacgtggcgctgccttccatgtgctccacctgcacg
cccgagtgtcagatgtacggccactccgacaactgctggatgccggcgggcggcgtcggc
ggagaagggacggccaagtcgggatcgcagctctccccgctgtcctcctacccggggccg
ctgcaccgccccgagtgggaccgccgtgacttggtgcccaacggttcggcgttgttccac
cacggaggtccgagcggcggcgtcgtcggcgtcggcgcgggcgggggtagcggcaacggc
ggcggcggagggggcggcgatgcggttggcggcgtgggaaagccgagcagcaccagcaac
cggcaggccaactcctactacaacgccttctacagcaacaactaccgcaggcacaatgac
ttcctcaacgaggcagaggaaatcccgctcgcccggccccaagcgtaccgaccggccacc
atcagcaccatgtccagcccggacttcaacaaggagctctatttgtaa
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