Petromyzon marinus (sea lamprey): 116943586
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Entry
116943586 CDS
T09614
Symbol
EXD1
Name
(RefSeq) piRNA biogenesis protein EXD1
KO
K18740
exonuclease 3'-5' domain-containing protein 1
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmrn03019
]
116943586 (EXD1)
Messenger RNA biogenesis [BR:
pmrn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
116943586 (EXD1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
LSM14
Motif
Other DBs
NCBI-GeneID:
116943586
NCBI-ProteinID:
XP_032812442
UniProt:
A0AAJ7T723
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Position
18:complement(4130050..4153889)
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AA seq
342 aa
AA seq
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MEALSAACLERRVHVVEFDVRFRGTIKCIDPTNKTLTLDKVEVIIGDAQMALPGLKMLDG
QGISAITFLDENPAKACRRQGAEKADASSGNVKPDRYCNRIPGKIVNYILIDKFQEKFGS
AIQNLSESSVISLELNGINISRFGKLCWLQVSTKETVYLFDILTLGYEAFDFGLRRILEN
EAILKVVHDCRFLSDCLYHQYKTSLANVFDTQIADVIVRKEEAGGKWPDKLRLLPECLSH
HLGLPAAAFQKYSVASATVWTMRPSHSALLHLAARHMPELLALRTVLLDKLMVPFTIHVG
HSLDAYRAQPDHVLCQVKRDSLELPQYLLSHLPDENWAKNGK
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggaggccttgtccgccgcttgcctcgagcggcgggtccacgtcgtggagtttgacgtt
cgctttcgaggcaccattaagtgcatcgatccgacgaacaagacgctgactctcgacaaa
gtcgaagtgatcatcggcgatgctcaaatggcattacctgggctgaaaatgctggatgga
caagggatatctgcaattacttttctggatgaaaatccggcgaaagcctgcagacggcaa
ggagctgagaaagctgatgcttcaagtggaaatgtcaagcctgacagatattgtaataga
attccagggaaaattgtgaactacatcttaattgacaaatttcaagagaagtttggatca
gctatccagaacctgagtgagtcatctgtgattagccttgagctaaatggaattaacatt
tccagatttggaaagctgtgctggcttcaggtgtccacaaaggagacagtttacctcttt
gacatcttgactctcggttacgaagcattcgattttggcctgcgaagaattttggaaaat
gaggcaattttaaaggtggttcatgactgcagatttttgtctgactgtctttaccaccag
tacaaaacatcactggccaatgtctttgacacacagattgcagatgtcatcgtgcgcaag
gaggaagccggtggcaagtggcctgacaaattgaggcttctgcccgagtgtttgtctcac
catctcggacttccagctgctgccttccagaaatacagtgtggccagcgcgacggtgtgg
acgatgcgccccagccactcggcactcctccatctggctgctcggcacatgcctgagctg
ctggcgctccgcacggtgttgctcgacaagttgatggtgcccttcacaatccatgtcggt
cacagcctcgacgcctaccgcgcccagccagaccacgtgctgtgccaagtgaagcgtgac
agcctggagctgccccagtatctgctgtcccatctgcctgatgaaaactgggccaagaat
gggaagtga
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