Petromyzon marinus (sea lamprey): 116943595
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Entry
116943595 CDS
T09614
Symbol
ABCE1
Name
(RefSeq) ATP-binding cassette sub-family E member 1 isoform X1
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pmrn03009
]
116943595 (ABCE1)
Ribosome biogenesis [BR:
pmrn03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
116943595 (ABCE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
Fer4_RLI
SMC_N
AAA_21
Fer4
AAA_22
AAA
Fer4_6
AAA_15
LdpA_Fe-S-bd
AAA_29
Fer4_2
RsgA_GTPase
NACHT
AAA_16
Fer4_21
Fer4_10
nSTAND3
AAA_30
Fer4_4
AAA_23
SRP54
ORC-CDC6-like
TsaE
Fer4_16
NPHP3_N
Fer4_9
Fer4_3
AAA_19
Fer4_8
Fer4_7
Motif
Other DBs
NCBI-GeneID:
116943595
NCBI-ProteinID:
XP_032812458
UniProt:
A0AAJ7T6Y9
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All DBs
Position
18:4626776..4638182
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AA seq
617 aa
AA seq
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MAASAPPGLSRHRPHISVMADKLTRIAIVSSDKCKPKKCRQECKKTCPVVRMGKLCIEVV
AQSKIAWISEELCIGCGICVKKCPFDAISIINLPSNLEKDTTHRYSANSFKLHRLPIPRP
GEVLGLVGTNGIGKSTALKILAGKQKPNLGRFNDPPDWQEILTYFRGSELQNYFTKILED
DLKAIIKPQYVDQIPKAVKGTVGVILDRKDETRTQEDICDRLDLSHLKERNVEDLSGGEL
QRFACAVVCIQKADVYMFDEPSSYLDVKQRLKCAITIRSLLGPDRFIIVVEHDLSVCDYL
SDYICCLYGVPGAYGVVTMPFSVREGINIFLDGYVPTENLRFRDMALVFKVAETAAEDDI
KRMCCYQYPGMKKCLGDFVMEIQAGEFTDSEIMVMLGENGTGKTTFIRMLAGRLKPDDGG
EVPFLNVSYKPQKISPKATGTVRQLLHEKIRNSYMHPQFCTDVMKPLQIESIIDQEVQNL
SGGELQRVALALCLGKPADVYLIDEPSAYLDSEQRLVAAKVIKRFILHAKKTAFVVEHDF
IMATYLADRVIVFEGVPSVNTIANTPQNLLAGMNKFLASLEITFRRDPNNFRPRINKLNS
IKDTEQKKSGNYFFLED
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgtccgccccgcctggcctgtctcggcaccgtcctcacatttcagtcatggct
gacaagctcaccagaattgccattgtcagcagtgacaaatgcaagcccaagaaatgcaga
caagagtgcaagaaaacatgtcccgttgtaagaatgggcaaactctgcatcgaggtggtt
gcccagtctaagattgcgtggatttctgaagagctttgcatcggttgtggcatctgtgtt
aagaaatgcccattcgatgccatctccatcatcaaccttcccagcaatcttgaaaaggac
accacacacagatacagtgcaaattcatttaagttgcacagactgcctatccctcgacct
ggagaagttctgggtttagtaggcaccaatggaattgggaagtcaactgcattgaaaata
ctggctgggaaacagaaaccaaacctgggtcgtttcaatgaccctcctgactggcaggag
atcttgacttacttccgtggttcagagctacagaactacttcacaaagattcttgaagat
gatctgaaggccattatcaagccccagtatgtggatcagatccccaaggccgtcaaggga
acagttggtgtaatcctcgacaggaaagatgaaacacgaactcaggaagacatctgtgac
cgtttggacttgagtcacttaaaagagagaaacgtcgaagacctttctggtggcgagctg
cagagatttgcctgtgctgtcgtctgtatacaaaaggctgacgtgtacatgtttgatgag
ccttccagctacttggatgtcaagcaaaggctaaaatgtgccatcaccatccgctcgctg
cttggtcctgacaggttcatcatcgttgtggagcacgacctgagtgtgtgcgactacctg
tcggactacatctgctgcctctacggtgtgcccggagcatatggtgtcgtcactatgccc
ttcagcgtaagagaaggcatcaacatcttcctggacgggtatgtgccgacggagaacttg
cgattccgtgacatggcgctggtgttcaaagtggcggagacggcggcagaggatgacatc
aagaggatgtgctgctaccagtaccctggcatgaagaaatgcctcggagacttcgtcatg
gagatccaagccggggagttcaccgactcagaaatcatggtcatgctcggggagaacggt
actggaaaaacgacattcatcaggatgctggctggaagactaaagccagatgatggaggt
gaagtcccatttctgaatgtcagctacaaacctcagaaaatcagtcccaaagcaacggga
actgtgcgacaactgttgcatgaaaagatccgcaattcgtacatgcacccgcagttctgc
actgatgtcatgaagcctctgcagatcgagagcatcattgaccaggaggtgcagaacctg
tctggtggtgagctgcagcgcgtcgcgctggcgctgtgcctgggcaagcccgctgacgtc
tacctcatagacgagccctctgcctaccttgactcggagcagcgtcttgtggcagccaag
gttatcaagcgattcatcctgcatgccaagaagactgcctttgtggtggagcatgacttc
atcatggccacctacctggctgaccgggttatcgtgtttgaaggggtaccctcggtgaac
accatagcaaacaccccccaaaacctgctcgctggaatgaacaaatttctggcatcattg
gagatcacattcagaagagatcccaacaacttccgtccaaggatcaacaagctgaattcc
atcaaggacactgagcagaaaaagagtggcaactactttttcctagaagactga
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