Petromyzon marinus (sea lamprey): 116943664
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Entry
116943664 CDS
T09614
Symbol
SHROOM2
Name
(RefSeq) protein Shroom2 isoform X1
Organism
pmrn
Petromyzon marinus (sea lamprey)
Motif
Pfam:
ASD2
ASD1
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
116943664
NCBI-ProteinID:
XP_032812592
EnsemblRapid:
ENSPMAG00000045633
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All DBs
Position
18:10355592..10616162
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AA seq
2068 aa
AA seq
DB search
MRPLAWLPPSLTRTDQCGLVCSNDPRCPHGVRRLSCCSGSSRGPPRVRRRCVRCTVSMRR
LNPLLPDCALQVEEGGKADLASALCVGDEVVVINGIRLSGLRQEAICLVKGSHKTLRLSV
RRRSDPVSRPHSWHSTKHEEDEEATGMMRISQGSASTAWHPTYHTSSSSTSDLSGSYDMA
GYGHHLSPDQYSSRGSMDSLDHPTQPSQHHQHLHPHHPHHNQHHPPHGSDGLLHPTSGQH
HGFYPHVQQQQQQQQQHHQHVKSSSSVDSKRDSAYSSFSVSDRSGSAENVAAAPVVGCWD
GSGGGGGGNLSPPADLRFVRTVYGEAGSAREEPETLASRRSDGEVPRNGEARGSATGVAA
AATYENGSRDICGAGSARARYEIRENLTNSAMKNYYGKDEPGEGKSRDIYASELGYRNTE
SLKRADHYSNKDCSMHNIKQANSLDYPSRYGKERLHSGCDETLGKEAGDSHQGQQPSYRR
CSESSRRSGGQLWQPPMKAAVSVDSVVSSPVGTPPPPPVRSVSFIATRNHEKSPSWSGPD
GYLPPAVAAAAPGPPNAAAPTPRPPPRGSSASNLLALSEPHPLNTVPERSPEVSPVVPRK
PVPSPQPAQAYPGQPLAPTGVYAAQQQQQDPRYALSVSGGAGGYGYSAVGKQCSDVYYSQ
PPATAESLKPQHGRHCEDGGFGQSPPPRSYSSGGRQSLGPPSSYQNQDGAAESNVGSLRG
QPFKSASMLELNQPCAAAARYYCISMNHPTQVEVAPCPPPKGEYRQWHDEAVQPAAYAYA
DQIRRPDSASRKRYNSSGSSSSSSSSHSSQGSIAARVDLKPTSFPPTDGRPPSSSGGGGR
RQLSGGSAESGSSFDGRQSAHADFDRGGGGFYGFAEDPRNGGGGGVADRLGTRNVISAER
TPMLHHLTVLGAAEGGSRAAAAATAGDPGKQVRRSDRFATTLRNEIQMKRAQLQKSKSSS
QLVEEEEEEENEATESLTGQWKGESAKDELNSPLDAAYGEAYKEHVKEAQTKVLRATSFR
RRDLEIRLPFDSSLKSRTLENSEGNHSRSSSLSNPPLTRSQLDSAFQSTESLPAHHIPRI
CGRKRLTDQQKKRSYSEPEKMNEVGVGSESDTSPAFGSKLRDGAFAYPEGSAALCGNSNG
DRGSVADRRKFFEKDGSKMSLLQRAQAKQQQQQLVSNSSNAKSERHDALKDGYGWYGHPE
LCLAKMEARRHSSSSSSSLSSSSEQQCLWRPHGEDVRPMAAYSDLSAPAYQQHAGSERKP
AAAGRAQGLEQQRPYGSDLNINDDGFGNSDHQTATGARGRERQHLQQPSWSQQAHLHHQQ
QQQMSLEMLPPRNSEKFVSSENLTSWKADGRRHVHVRSRSSPTSEVSCKQELLARLGKLE
IRRDEDHAPVHSNPEQHGSAASWSRAGRLDRVREPDGPSRDGWAAPAGGARWGRGTHSSG
RPERANLEESEGSVRLRRERAASAGLLDLPGVGASSGAWPDTHTAASRLQDSTQRPLAAT
KKGAPPPKFLAKRDGSEPYATAATSAGDGAGKRSPEARATEHGERRRGVPGEASAEPGVS
SGEPVAPPPATLEAMPGNFPPPPSSPPLPPRPSLAPAISSSSSPPAPSPSLLLPPQQLTD
RPPTAMDTSATPRIESFMDNNKAVKMVPVMIVRSESKDIRSHQTAAAPDSLVPTTKPEPP
VVELHLTSAQNSADVERSAAETNPERASTANQEAEEELGKPEKIGESSVSAFVSFQPSRS
QQQQQEKVVDKEEEQRQQEDEDRKTEQLAKEIVGKDRSLADVLAPGVRTARELMEGIFPQ
SDPALGEALQARRKSQPRGAGAAKAAGDGAERREEAVSPTALPPCPAYYSVSAPKAELLM
KMKDLVPSVDDDADEEIDPDLTEKKAELIASIGRKLRTLREARELLLEDVRDNEELGREV
EGSAEASCKPNELDKFRMFVGDLDKVVSLLLSLAGRLARVDNAINSLGTDATAEERQSLV
QKRKLLCSQHEDARELKENLDRRERAVDVILAQHLSAEQLQDYRHFVKMKSALIIERREL
DDKIKLGEEQLRCLRESMPPECRAAATD
NT seq
6207 nt
NT seq
+upstream
nt +downstream
nt
atgcgcccacttgcatggctcccgccttctctaacccgcactgaccagtgtggtttagtc
tgctcaaatgacccccgctgtccgcacggcgtgcggaggctgtcgtgctgcagtggatct
tcaagaggcccgccgcgcgttaggcgccgatgcgtacgatgcacggtcagcatgcggcgc
ttgaatcccctgctgcctgattgcgcgctgcaggtggaggagggtggcaaggcggacctt
gcgagcgctctgtgcgttggggacgaggtggtcgtcatcaacggcattcggctgagcggt
ttgcggcaggaggccatctgcctcgtcaagggctcccacaagaccctgcggctctccgtg
cgcaggaggagtgacccagtgagccgcccccactcgtggcactcgaccaaacacgaggag
gacgaagaggcgacgggcatgatgcgcatctcccagggcagcgccagcaccgcctggcac
ccgacctaccacaccagtagctcctctaccagtgacctctccggatcgtacgacatggcg
ggatatgggcaccacctcagcccggaccagtacagctcccggggcagcatggatagcctc
gaccaccccacgcagccgagccagcaccaccagcacctccacccgcaccatccgcaccac
aaccagcatcacccgccccacggcagcgacgggctgctgcaccccacttcagggcagcac
cacggcttctatccccacgtacagcagcagcagcagcagcaacagcagcaccatcagcac
gtcaagtcgtccagcagcgtggacagcaagcgcgactcggcctacagctccttctccgtg
agcgaccgctcgggatcggcggagaatgtggcggccgcccctgtggtgggctgctgggat
ggttccggtggcggtggtggcgggaacttgtcaccaccggctgacctgcgctttgtgcgg
actgtttacggagaggcgggcagtgcccgcgaggagccggagacactggcatcacggcgc
agcgacggtgaggtgccgaggaatggggaggcgcgtggatccgcgaccggtgtcgccgcc
gccgccacgtacgagaacgggagccgcgacatctgtggagcaggctcggccagggcccgg
tacgagatcagggagaacctgaccaacagcgccatgaagaactactacggcaaggacgag
ccgggcgagggcaagtcccgcgacatttacgcctccgagcttgggtacagaaacacggag
agcctcaagagggcggaccattacagcaacaaggactgctcgatgcacaacatcaagcag
gcaaacagcctcgattaccccagcaggtacggcaaggagcgcctccactcgggctgtgac
gagacgctcggcaaggaggccggcgacagccaccaggggcagcagccgtcgtacaggagg
tgctcggagtcgagtcggcggagcggcgggcagctgtggcagccaccgatgaaggcggcc
gtgagcgtggacagcgtggtctcctcgccggtagggacgccgccgccgccgcccgtccgc
agcgtcagcttcatcgccacgcgcaaccacgagaagtcgccgtcgtggtcgggccccgac
ggctacctcccgccggcggtcgcggcggccgcgccggggccccccaacgccgcggcgccc
accccccggcctccgccacgtggcagctcggcctcgaacctcctggcgctgtcggagccg
cacccgctcaacacggtgccagagcgcagccccgaggtcagccccgtggtcccacgcaag
ccggtgccgtccccgcagccagcacaggcctaccccgggcagcccctcgcccccacaggc
gtctacgcggcgcagcagcagcaacaagatcctcgctacgcgctgtcggtgtccggaggc
gccggcggttatggctattcggccgtgggaaagcagtgctccgacgtttattacagtcag
cctcctgcgacagccgagagcctgaagcctcagcatggcaggcactgcgaggatggtggc
ttcggccaaagcccgcccccgagatcctacagtagcggcgggaggcagagcctgggcccg
ccgagctcgtatcaaaatcaagatggggcggcggagtccaacgtcggttcgctccgaggg
cagccgtttaagtcggccagcatgctggagctaaaccagccatgtgctgcggcggcgagg
tactactgcatctccatgaaccacccaacgcaggtggaggtggccccgtgcccaccgccc
aagggggagtacaggcagtggcacgacgaggccgtccagccggcggcctacgcttatgcg
gaccagatccggagaccggactcggccagccggaagcgctacaacagcagtggcagcagc
agcagcagcagcagcagccacagctcgcagggcagcatcgccgcgcgcgtcgacctgaaa
cccacgagcttcccgccgacggacggccgcccccccagcagcagcggcggcggcggcagg
aggcagttgagcggtggctcggccgagagcggctccagcttcgacggccggcagtcggcg
cacgccgacttcgatagggggggtggcggcttctacggctttgcagaggaccctcgcaac
ggcggcggcggcggcgtggcggaccggttgggcacgcgcaacgtgattagcgctgagcgc
acgcctatgctgcatcacctgacggtgctcggtgcggcggagggcggcagtagggcggcg
gcggcggcgaccgccggtgatcccggcaagcaggtacggcgcagcgaccgcttcgcgacc
acactgcgtaacgagatccagatgaaacgtgcccagctgcagaagagcaagagctcctct
cagctcgtggaagaggaggaggaggaagagaatgaagccacggagtcgctaacgggccag
tggaaaggagagtccgccaaggatgagctcaactccccgctggatgctgcgtacggcgag
gcctacaaggagcacgtgaaggaggcgcagaccaaggttctcagagcgacgtccttccgc
cgccgggacctggaaatccgactgccgttcgactcgagcctgaagtcgcggacgcttgag
aactcggagggcaatcacagcaggtcgagctctctgagcaacccgccgctcactcggagc
caactggacagtgctttccagagcacagagagcctgccagcgcaccacattccccgcata
tgtggtcgcaagcggctgacggaccagcagaagaagaggtcgtattcggagccggagaag
atgaacgaggtgggtgtgggttcggagagtgacacttccccggcctttggaagcaagttg
cgcgatggcgcgtttgcctacccggagggcagcgcggctctttgcggcaacagcaatggt
gaccgcggctctgtcgcagacagacggaaattcttcgagaaggacggcagcaagatgtct
ctcctgcaaagggcacaggcaaaacagcagcagcagcagctggtctcaaattcttcgaac
gctaaatccgaacggcacgatgcgctgaaagatggctacggttggtacggtcatcccgag
ctgtgcttggcaaaaatggaagcccgtcgccactcctcgtcatcctcttccagcctgagc
tcctcgtcggagcagcaatgcctatggaggccccacggagaggacgtcagaccgatggcc
gcgtattccgacttgagcgcccctgcgtatcagcaacacgccggctctgagaggaagccc
gcagccgctggccgtgcccaggggctggagcagcagcgaccttacggctccgacttgaat
ataaacgacgacggcttcggcaactccgatcatcagacggcgacgggcgcccgtggcagg
gagcgccagcacttgcagcagccatcgtggtcacagcaggcgcacctgcaccaccagcag
cagcagcagatgtccctggagatgctgcccccacgaaattctgaaaagtttgtgtccagc
gaaaatctgacgagctggaaggctgacgggaggaggcacgtgcacgttcgctcgcgctct
tcgcctacctcggaggtgtcctgcaagcaggagctgttggcgcgtctggggaagctggag
atccgcagggatgaggaccacgccccggtgcactccaaccccgagcagcatggctcagcg
gccagttggtcgagggccgggcgcctggatagagtgagggagccagacggacccagcaga
gacggctgggctgctccggctggaggtgcccggtggggccggggcacccactccagtggc
aggcctgagcgtgccaaccttgaggagtcggagggctctgtgcgtttgcggcgtgagcgg
gctgcgtctgcggggcttctggacctgcctggggtcggcgcgagctccggggcgtggcca
gacacgcacacggcagcgtcgcgtctccaagattctacgcagaggcccttagcggcgacc
aagaaaggggcgccccctcccaagttcctggcgaagcgcgacggctccgagccctacgcc
acggccgccacctcggcaggagacggcgcgggcaagcggagtcccgaggccagagccacg
gagcacggcgagcgtcgccgaggggtccccggggaagcctctgcagagcccggcgtgagc
agcggcgagcccgtggcaccgccacctgccacgctggaggcgatgccgggcaacttccct
ccccccccttcgtctccgccactgccgccgcgcccatccctggcgcccgccatctcctca
tcgtcttctcctccggctccctcgccgtccctcctgctgcccccccagcagctgacggac
aggccccccacagccatggacacgtccgctactcccaggattgaaagcttcatggacaac
aacaaggctgtgaagatggtcccagtgatgatcgtcagatccgaatcaaaagacatcagg
agccaccaaacagctgctgcccccgacagcctcgtgcccaccacgaagccggagccccct
gtcgtggagctgcacctgacgtccgcgcagaacagtgccgacgtagagaggagcgccgcg
gagaccaacccggagcgcgcttccacggcaaaccaagaggcggaggaagagctcggcaaa
ccggagaagataggcgagagctcggtgtcggcgtttgtgagtttccagccgtccaggagt
cagcagcagcagcaggagaaggtggtggacaaggaggaggaacagaggcaacaggaggac
gaggaccgcaagactgagcagctcgccaaggagatcgtcggcaaagaccgctcgctcgca
gacgtgctggcgcctggcgttcggacggcgcgtgagctcatggagggcatcttcccgcaa
agtgacccggcgcttggggaggccctgcaggctcgccgcaagtcccagccgcggggggcg
ggcgccgcaaaggccgccggcgacggggcagagaggagagaggaagcggtctcccccacg
gcgctgccaccgtgcccggcctactacagtgtgtccgcacccaaagccgagctgctcatg
aagatgaaggacctggtaccctcggtggacgacgacgcggacgaggaaatcgacccggac
ctcacggagaagaaggcggagctgatcgccagcatcgggcggaagctgcgcacgctgcgc
gaggcacgcgagctcctgctggaggacgtgcgcgacaacgaggagctgggccgcgaggtc
gagggttccgccgaggcctcgtgcaagcccaacgagctcgacaagttccgcatgttcgtc
ggcgacctcgacaaggtggtgagcctgctgctgtcgctggcaggcaggctggcgcgcgtc
gacaacgccatcaacagcctgggcaccgacgccaccgccgaggaaaggcaatcgctggtg
cagaagcgcaagctgctgtgtagccagcacgaggacgcgcgcgagctcaaggagaacctg
gaccggcgggagcgcgcggtcgacgtgatcctcgcgcagcacctgagcgccgagcagctg
caggactaccgccacttcgtcaagatgaagtcggcgctgatcatcgagcggcgagagctc
gacgacaaaatcaagctgggcgaggagcagctccgctgcctgcgggagagcatgccgccc
gaatgccgcgccgccgccaccgactga
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