KEGG   Petromyzon marinus (sea lamprey): 116943664
Entry
116943664         CDS       T09614                                 
Symbol
SHROOM2
Name
(RefSeq) protein Shroom2 isoform X1
Organism
pmrn  Petromyzon marinus (sea lamprey)
Motif
Pfam: ASD2 ASD1 PDZ PDZ_6
Other DBs
NCBI-GeneID: 116943664
NCBI-ProteinID: XP_032812592
EnsemblRapid: ENSPMAG00000045633
LinkDB
Position
18:10355592..10616162
AA seq 2068 aa
MRPLAWLPPSLTRTDQCGLVCSNDPRCPHGVRRLSCCSGSSRGPPRVRRRCVRCTVSMRR
LNPLLPDCALQVEEGGKADLASALCVGDEVVVINGIRLSGLRQEAICLVKGSHKTLRLSV
RRRSDPVSRPHSWHSTKHEEDEEATGMMRISQGSASTAWHPTYHTSSSSTSDLSGSYDMA
GYGHHLSPDQYSSRGSMDSLDHPTQPSQHHQHLHPHHPHHNQHHPPHGSDGLLHPTSGQH
HGFYPHVQQQQQQQQQHHQHVKSSSSVDSKRDSAYSSFSVSDRSGSAENVAAAPVVGCWD
GSGGGGGGNLSPPADLRFVRTVYGEAGSAREEPETLASRRSDGEVPRNGEARGSATGVAA
AATYENGSRDICGAGSARARYEIRENLTNSAMKNYYGKDEPGEGKSRDIYASELGYRNTE
SLKRADHYSNKDCSMHNIKQANSLDYPSRYGKERLHSGCDETLGKEAGDSHQGQQPSYRR
CSESSRRSGGQLWQPPMKAAVSVDSVVSSPVGTPPPPPVRSVSFIATRNHEKSPSWSGPD
GYLPPAVAAAAPGPPNAAAPTPRPPPRGSSASNLLALSEPHPLNTVPERSPEVSPVVPRK
PVPSPQPAQAYPGQPLAPTGVYAAQQQQQDPRYALSVSGGAGGYGYSAVGKQCSDVYYSQ
PPATAESLKPQHGRHCEDGGFGQSPPPRSYSSGGRQSLGPPSSYQNQDGAAESNVGSLRG
QPFKSASMLELNQPCAAAARYYCISMNHPTQVEVAPCPPPKGEYRQWHDEAVQPAAYAYA
DQIRRPDSASRKRYNSSGSSSSSSSSHSSQGSIAARVDLKPTSFPPTDGRPPSSSGGGGR
RQLSGGSAESGSSFDGRQSAHADFDRGGGGFYGFAEDPRNGGGGGVADRLGTRNVISAER
TPMLHHLTVLGAAEGGSRAAAAATAGDPGKQVRRSDRFATTLRNEIQMKRAQLQKSKSSS
QLVEEEEEEENEATESLTGQWKGESAKDELNSPLDAAYGEAYKEHVKEAQTKVLRATSFR
RRDLEIRLPFDSSLKSRTLENSEGNHSRSSSLSNPPLTRSQLDSAFQSTESLPAHHIPRI
CGRKRLTDQQKKRSYSEPEKMNEVGVGSESDTSPAFGSKLRDGAFAYPEGSAALCGNSNG
DRGSVADRRKFFEKDGSKMSLLQRAQAKQQQQQLVSNSSNAKSERHDALKDGYGWYGHPE
LCLAKMEARRHSSSSSSSLSSSSEQQCLWRPHGEDVRPMAAYSDLSAPAYQQHAGSERKP
AAAGRAQGLEQQRPYGSDLNINDDGFGNSDHQTATGARGRERQHLQQPSWSQQAHLHHQQ
QQQMSLEMLPPRNSEKFVSSENLTSWKADGRRHVHVRSRSSPTSEVSCKQELLARLGKLE
IRRDEDHAPVHSNPEQHGSAASWSRAGRLDRVREPDGPSRDGWAAPAGGARWGRGTHSSG
RPERANLEESEGSVRLRRERAASAGLLDLPGVGASSGAWPDTHTAASRLQDSTQRPLAAT
KKGAPPPKFLAKRDGSEPYATAATSAGDGAGKRSPEARATEHGERRRGVPGEASAEPGVS
SGEPVAPPPATLEAMPGNFPPPPSSPPLPPRPSLAPAISSSSSPPAPSPSLLLPPQQLTD
RPPTAMDTSATPRIESFMDNNKAVKMVPVMIVRSESKDIRSHQTAAAPDSLVPTTKPEPP
VVELHLTSAQNSADVERSAAETNPERASTANQEAEEELGKPEKIGESSVSAFVSFQPSRS
QQQQQEKVVDKEEEQRQQEDEDRKTEQLAKEIVGKDRSLADVLAPGVRTARELMEGIFPQ
SDPALGEALQARRKSQPRGAGAAKAAGDGAERREEAVSPTALPPCPAYYSVSAPKAELLM
KMKDLVPSVDDDADEEIDPDLTEKKAELIASIGRKLRTLREARELLLEDVRDNEELGREV
EGSAEASCKPNELDKFRMFVGDLDKVVSLLLSLAGRLARVDNAINSLGTDATAEERQSLV
QKRKLLCSQHEDARELKENLDRRERAVDVILAQHLSAEQLQDYRHFVKMKSALIIERREL
DDKIKLGEEQLRCLRESMPPECRAAATD
NT seq 6207 nt   +upstreamnt  +downstreamnt
atgcgcccacttgcatggctcccgccttctctaacccgcactgaccagtgtggtttagtc
tgctcaaatgacccccgctgtccgcacggcgtgcggaggctgtcgtgctgcagtggatct
tcaagaggcccgccgcgcgttaggcgccgatgcgtacgatgcacggtcagcatgcggcgc
ttgaatcccctgctgcctgattgcgcgctgcaggtggaggagggtggcaaggcggacctt
gcgagcgctctgtgcgttggggacgaggtggtcgtcatcaacggcattcggctgagcggt
ttgcggcaggaggccatctgcctcgtcaagggctcccacaagaccctgcggctctccgtg
cgcaggaggagtgacccagtgagccgcccccactcgtggcactcgaccaaacacgaggag
gacgaagaggcgacgggcatgatgcgcatctcccagggcagcgccagcaccgcctggcac
ccgacctaccacaccagtagctcctctaccagtgacctctccggatcgtacgacatggcg
ggatatgggcaccacctcagcccggaccagtacagctcccggggcagcatggatagcctc
gaccaccccacgcagccgagccagcaccaccagcacctccacccgcaccatccgcaccac
aaccagcatcacccgccccacggcagcgacgggctgctgcaccccacttcagggcagcac
cacggcttctatccccacgtacagcagcagcagcagcagcaacagcagcaccatcagcac
gtcaagtcgtccagcagcgtggacagcaagcgcgactcggcctacagctccttctccgtg
agcgaccgctcgggatcggcggagaatgtggcggccgcccctgtggtgggctgctgggat
ggttccggtggcggtggtggcgggaacttgtcaccaccggctgacctgcgctttgtgcgg
actgtttacggagaggcgggcagtgcccgcgaggagccggagacactggcatcacggcgc
agcgacggtgaggtgccgaggaatggggaggcgcgtggatccgcgaccggtgtcgccgcc
gccgccacgtacgagaacgggagccgcgacatctgtggagcaggctcggccagggcccgg
tacgagatcagggagaacctgaccaacagcgccatgaagaactactacggcaaggacgag
ccgggcgagggcaagtcccgcgacatttacgcctccgagcttgggtacagaaacacggag
agcctcaagagggcggaccattacagcaacaaggactgctcgatgcacaacatcaagcag
gcaaacagcctcgattaccccagcaggtacggcaaggagcgcctccactcgggctgtgac
gagacgctcggcaaggaggccggcgacagccaccaggggcagcagccgtcgtacaggagg
tgctcggagtcgagtcggcggagcggcgggcagctgtggcagccaccgatgaaggcggcc
gtgagcgtggacagcgtggtctcctcgccggtagggacgccgccgccgccgcccgtccgc
agcgtcagcttcatcgccacgcgcaaccacgagaagtcgccgtcgtggtcgggccccgac
ggctacctcccgccggcggtcgcggcggccgcgccggggccccccaacgccgcggcgccc
accccccggcctccgccacgtggcagctcggcctcgaacctcctggcgctgtcggagccg
cacccgctcaacacggtgccagagcgcagccccgaggtcagccccgtggtcccacgcaag
ccggtgccgtccccgcagccagcacaggcctaccccgggcagcccctcgcccccacaggc
gtctacgcggcgcagcagcagcaacaagatcctcgctacgcgctgtcggtgtccggaggc
gccggcggttatggctattcggccgtgggaaagcagtgctccgacgtttattacagtcag
cctcctgcgacagccgagagcctgaagcctcagcatggcaggcactgcgaggatggtggc
ttcggccaaagcccgcccccgagatcctacagtagcggcgggaggcagagcctgggcccg
ccgagctcgtatcaaaatcaagatggggcggcggagtccaacgtcggttcgctccgaggg
cagccgtttaagtcggccagcatgctggagctaaaccagccatgtgctgcggcggcgagg
tactactgcatctccatgaaccacccaacgcaggtggaggtggccccgtgcccaccgccc
aagggggagtacaggcagtggcacgacgaggccgtccagccggcggcctacgcttatgcg
gaccagatccggagaccggactcggccagccggaagcgctacaacagcagtggcagcagc
agcagcagcagcagcagccacagctcgcagggcagcatcgccgcgcgcgtcgacctgaaa
cccacgagcttcccgccgacggacggccgcccccccagcagcagcggcggcggcggcagg
aggcagttgagcggtggctcggccgagagcggctccagcttcgacggccggcagtcggcg
cacgccgacttcgatagggggggtggcggcttctacggctttgcagaggaccctcgcaac
ggcggcggcggcggcgtggcggaccggttgggcacgcgcaacgtgattagcgctgagcgc
acgcctatgctgcatcacctgacggtgctcggtgcggcggagggcggcagtagggcggcg
gcggcggcgaccgccggtgatcccggcaagcaggtacggcgcagcgaccgcttcgcgacc
acactgcgtaacgagatccagatgaaacgtgcccagctgcagaagagcaagagctcctct
cagctcgtggaagaggaggaggaggaagagaatgaagccacggagtcgctaacgggccag
tggaaaggagagtccgccaaggatgagctcaactccccgctggatgctgcgtacggcgag
gcctacaaggagcacgtgaaggaggcgcagaccaaggttctcagagcgacgtccttccgc
cgccgggacctggaaatccgactgccgttcgactcgagcctgaagtcgcggacgcttgag
aactcggagggcaatcacagcaggtcgagctctctgagcaacccgccgctcactcggagc
caactggacagtgctttccagagcacagagagcctgccagcgcaccacattccccgcata
tgtggtcgcaagcggctgacggaccagcagaagaagaggtcgtattcggagccggagaag
atgaacgaggtgggtgtgggttcggagagtgacacttccccggcctttggaagcaagttg
cgcgatggcgcgtttgcctacccggagggcagcgcggctctttgcggcaacagcaatggt
gaccgcggctctgtcgcagacagacggaaattcttcgagaaggacggcagcaagatgtct
ctcctgcaaagggcacaggcaaaacagcagcagcagcagctggtctcaaattcttcgaac
gctaaatccgaacggcacgatgcgctgaaagatggctacggttggtacggtcatcccgag
ctgtgcttggcaaaaatggaagcccgtcgccactcctcgtcatcctcttccagcctgagc
tcctcgtcggagcagcaatgcctatggaggccccacggagaggacgtcagaccgatggcc
gcgtattccgacttgagcgcccctgcgtatcagcaacacgccggctctgagaggaagccc
gcagccgctggccgtgcccaggggctggagcagcagcgaccttacggctccgacttgaat
ataaacgacgacggcttcggcaactccgatcatcagacggcgacgggcgcccgtggcagg
gagcgccagcacttgcagcagccatcgtggtcacagcaggcgcacctgcaccaccagcag
cagcagcagatgtccctggagatgctgcccccacgaaattctgaaaagtttgtgtccagc
gaaaatctgacgagctggaaggctgacgggaggaggcacgtgcacgttcgctcgcgctct
tcgcctacctcggaggtgtcctgcaagcaggagctgttggcgcgtctggggaagctggag
atccgcagggatgaggaccacgccccggtgcactccaaccccgagcagcatggctcagcg
gccagttggtcgagggccgggcgcctggatagagtgagggagccagacggacccagcaga
gacggctgggctgctccggctggaggtgcccggtggggccggggcacccactccagtggc
aggcctgagcgtgccaaccttgaggagtcggagggctctgtgcgtttgcggcgtgagcgg
gctgcgtctgcggggcttctggacctgcctggggtcggcgcgagctccggggcgtggcca
gacacgcacacggcagcgtcgcgtctccaagattctacgcagaggcccttagcggcgacc
aagaaaggggcgccccctcccaagttcctggcgaagcgcgacggctccgagccctacgcc
acggccgccacctcggcaggagacggcgcgggcaagcggagtcccgaggccagagccacg
gagcacggcgagcgtcgccgaggggtccccggggaagcctctgcagagcccggcgtgagc
agcggcgagcccgtggcaccgccacctgccacgctggaggcgatgccgggcaacttccct
ccccccccttcgtctccgccactgccgccgcgcccatccctggcgcccgccatctcctca
tcgtcttctcctccggctccctcgccgtccctcctgctgcccccccagcagctgacggac
aggccccccacagccatggacacgtccgctactcccaggattgaaagcttcatggacaac
aacaaggctgtgaagatggtcccagtgatgatcgtcagatccgaatcaaaagacatcagg
agccaccaaacagctgctgcccccgacagcctcgtgcccaccacgaagccggagccccct
gtcgtggagctgcacctgacgtccgcgcagaacagtgccgacgtagagaggagcgccgcg
gagaccaacccggagcgcgcttccacggcaaaccaagaggcggaggaagagctcggcaaa
ccggagaagataggcgagagctcggtgtcggcgtttgtgagtttccagccgtccaggagt
cagcagcagcagcaggagaaggtggtggacaaggaggaggaacagaggcaacaggaggac
gaggaccgcaagactgagcagctcgccaaggagatcgtcggcaaagaccgctcgctcgca
gacgtgctggcgcctggcgttcggacggcgcgtgagctcatggagggcatcttcccgcaa
agtgacccggcgcttggggaggccctgcaggctcgccgcaagtcccagccgcggggggcg
ggcgccgcaaaggccgccggcgacggggcagagaggagagaggaagcggtctcccccacg
gcgctgccaccgtgcccggcctactacagtgtgtccgcacccaaagccgagctgctcatg
aagatgaaggacctggtaccctcggtggacgacgacgcggacgaggaaatcgacccggac
ctcacggagaagaaggcggagctgatcgccagcatcgggcggaagctgcgcacgctgcgc
gaggcacgcgagctcctgctggaggacgtgcgcgacaacgaggagctgggccgcgaggtc
gagggttccgccgaggcctcgtgcaagcccaacgagctcgacaagttccgcatgttcgtc
ggcgacctcgacaaggtggtgagcctgctgctgtcgctggcaggcaggctggcgcgcgtc
gacaacgccatcaacagcctgggcaccgacgccaccgccgaggaaaggcaatcgctggtg
cagaagcgcaagctgctgtgtagccagcacgaggacgcgcgcgagctcaaggagaacctg
gaccggcgggagcgcgcggtcgacgtgatcctcgcgcagcacctgagcgccgagcagctg
caggactaccgccacttcgtcaagatgaagtcggcgctgatcatcgagcggcgagagctc
gacgacaaaatcaagctgggcgaggagcagctccgctgcctgcgggagagcatgccgccc
gaatgccgcgccgccgccaccgactga

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