Petromyzon marinus (sea lamprey): 116943682
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Entry
116943682 CDS
T09614
Name
(RefSeq) gamma-aminobutyric acid receptor subunit gamma-2-like
KO
K05186
gamma-aminobutyric acid receptor subunit gamma
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04080
Neuroactive ligand-receptor interaction
pmrn04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
116943682
04082 Neuroactive ligand signaling
116943682
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pmrn04040
]
116943682
Ion channels [BR:
pmrn04040
]
Ligand-gated channels
GABA-A
116943682
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
116943682
NCBI-ProteinID:
XP_032812639
UniProt:
A0AAJ7T882
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Position
18:complement(12702068..12846558)
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AA seq
639 aa
AA seq
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MIVMMAFRLVSGWRPGSVGMREPPGWTKIQRRRRHNQQQQQLQHQQQPHDHHGHHHHNHD
HHHHHQFHHHHEKRHQYNRQELQQIWKQDRRRPVREEQQNHQQQQHLQKHHHPPQQQQCP
AFIFWGRTDYTEWQPILLAPPARQDKEEGWRIIKEREKTTTMPQEEVVDVAGVSPTVASR
MAAVPPRLSRRVLLLALILLSLHACAGKIEEDDFQDMNANKTWVLAPKVYESDVTQILNT
LLEGYDNNLRPDIGIQPITVETDIYVNSIGPVSAINMEYTIDIFFAQTWFDSRLRFNSSM
KVLRLNSNMVGKIWIPDTFFRNSKQADAHWITTPNQLLRISNNGKVLYTLRLTINAECQL
QLHNFPMDEHSCPLEFSSYGYPKDEILYKWSKSSVEVANQRSWKLYQFSFLGLRNTTNIL
STDSGDYIVMTVYFDLVRRMGYFTIQTYIPCILIVVLSWVSFWINKDATPARTSLGITTV
LTMTTLSTISRKSLPKVSYATAMDLFVTVCFFFVFAAMIEFAMLTFFVSKKKLSGGKKKK
KRHAPNPVVLDVRPGSATVPMNNAMQHLSAEAEEEGGYECLDGKDCSSFFCCFEDCERQS
WKEGRIHIQVLKLDSYSRVFFPISFTLFNLVYWIAYLYL
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgattgtgatgatggcgtttcggctggtgtcggggtggcggcccgggtctgtcggcatg
cgggagcctccgggatggaccaagatccagcgccgccgtcgtcacaatcagcaacagcag
cagctgcagcaccagcagcagcctcacgaccatcacggccaccaccaccacaatcacgac
caccaccatcaccaccaatttcatcaccatcatgaaaaacgccatcaatataatcgtcaa
gagttgcagcagatttggaagcaggatcgacggagacctgttcgagaggagcagcagaat
catcagcagcagcagcatcttcaaaaacatcatcatcctcctcaacagcagcagtgtcct
gcatttatattctggggccgcaccgactacacggagtggcagcccattctcctggccccg
ccagcccggcaggacaaagaggaggggtggagaataataaaggagagggagaagacgacg
acgatgccacaggaggaggtggtggatgtcgccggggtttcccccaccgtggcgtcgcga
atggctgcggttcctccccggctgtcgaggcgcgttctcctcttggctctcatactgctg
tctctgcacgcctgcgctggcaagattgaagaggatgatttccaggatatgaacgctaac
aagacatgggtcctggcccccaaagtctacgaaagcgacgtcacccaaattctcaacacg
cttctggaaggctacgataacaatctgagaccggacattggcatccagccgattacggtg
gaaacggacatctacgtcaacagcatcggcccagtgtcagctattaacatggagtacacc
atcgatatattcttcgcccagacgtggtttgacagcagacttcggttcaacagctccatg
aaagtgttgagattgaacagcaacatggtggggaagatttggatcccagataccttcttc
cggaactcaaagcaggctgacgcccattggattacgaccccaaaccaattgctgcgcata
tcaaacaacggaaaggtgctctacacactgagattgacaataaatgcagaatgtcagctt
cagctccataactttcctatggatgagcattcctgtcccctggaattttccagttacggt
tatcccaaggatgagatcctttacaaatggagcaagagttctgtggaagttgccaaccaa
cgctcttggaagctctaccagttctccttcctgggcctcaggaacaccaccaatatcctg
tcgactgattccggtgattacatcgtcatgacggtttattttgatttggtgagaagaatg
ggatatttcaccattcagacgtacatcccctgcatactgatcgttgtgctgtcatgggtg
tccttttggatcaacaaagatgccactcccgccagaacatcccttgggatcacgacggtg
ctgaccatgaccactctgagcaccatctcccgcaagtcgctgcccaaggtttcctatgca
acggccatggacctcttcgtcaccgtctgcttcttcttcgtctttgccgccatgattgag
ttcgccatgctcacgttcttcgtcagcaagaagaagctcagtggcggcaagaaaaagaag
aaaaggcacgcgccgaaccccgttgtgctggacgtgagacccggttcggcgacagtgccc
atgaataacgccatgcagcacctctcggccgaggcagaggaggagggtggctacgaatgc
ctggacggcaaagactgctccagcttcttctgctgcttcgaggactgtgagcggcagtcg
tggaaagagggccggatccacattcaggtcctcaagctcgactcgtactcgcgcgtcttc
tttcccatctccttcacgctcttcaatctcgtttattggatcgcgtacctttacctgtaa
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