Petromyzon marinus (sea lamprey): 116943793
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Entry
116943793 CDS
T09614
Name
(RefSeq) CLIP-associating protein 2-like
KO
K16578
CLIP-associating protein 1/2
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmrn03036
]
116943793
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pmrn04812
]
116943793
Chromosome and associated proteins [BR:
pmrn03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
116943793
Cytoskeleton proteins [BR:
pmrn04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
116943793
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
HEAT_EF3_N
HEAT
TOR1L1_N
ParcG
UTP20
Paxt-1_C
UVSSA_N
TAN
Motif
Other DBs
NCBI-GeneID:
116943793
NCBI-ProteinID:
XP_032812892
UniProt:
A0AAJ7T7X6
LinkDB
All DBs
Position
19:complement(11482568..11524654)
Genome browser
AA seq
1429 aa
AA seq
DB search
MKRLICKKICSYKAHEEDEPVEGKGAPGGKASRRGPGEGGTGRRQGPWSAKAATGREGAG
AVDEEDFTKAFEDVPSVQIYSNRDLEDAMSKIRDILSDDKHDWEQRVAAVREVRSLLVAG
ATKHEGFLQQLRLMDPALKLSVRDLRSQVVRETCITLAYLSALLRNKFEFTAEAVLTGLF
ALVPNSAKVMATSGLVAIRLILKNTHAPRLTPIVCSNAASKAVSVRRRSFEFLDLMFQEW
QTAALERHVSLLVDTVRKGITDADSDARLEARKAYWGLHNHAPGAAKALLTSLEPSYQRA
VTAQRGGAHPNGSGLLQPHSDRSSSSSQESLNRHLGKRGLPHNVHVATKTKVPAGARKPP
PCAPGAMQRSRSDVDVGAAHSAKARMAAGSGGASGAGSGVGVALGRERPPTAPARHHVTS
SGYGILHKPGGVGSLGSPGERHGRPAAKSVSQNQRSRSSSPGRFLAGMGTRVSRGPRPPI
PAPACALPAPPLLSQVPQAGAGGPSGQRVSRIPRSLGGSRDSSPARIGPSVRESRIPRVS
LSQGCSRDTSRESSRDPSPVRAFTALSRGSRIPRVSLSQGCSRDTSRESSRDPSPVRAFT
AHSTRQQSRSTSALTNSFVPSDPYSLMQSRGISSSVNAMRFLDPGSDVEAAVADALTGST
RAKRKPVRRRYDAYGMTSDDDAMSDASSACSERSCGSRGSRGAHGAPLAPGAPGPYLARQ
AEDVADILNRCASSNWAERRDGLLALQALLRAQRTLSRVELKRLCEIFTRMFADPHSKVS
AVGVPGGSPTRVTRAVMSPPLVTQRREANPKCPSCHSPKVSNPCVPCAPCGPTCPLPWIG
ILQRVFSMFLETLVDFVLTHRAELHDWLFVLLTQLLKKMGADLLGSVQAKAQRCLDVTRE
CFPPDLQFNILMRFVVDQTQVLNLKVKVAVLRYICALSRIMEPRGFVNASETRLAVSRII
TWTTEPKSSEVRKAAQAVLIALFELHPPEFTMLLGALPKTFQDGATRLLHNHIKATPKAG
GNQASPSGAAHRAPMRPPANRVSPVTSPSASSQGTVSPGTSEADGEAGEEFYRSLRGVSQ
AIQSYSYRSQEDLTEQSPANAAAAGREQGTGAALGREGEGGRDTPDSEWRSHHTAPPRGV
VWPHAQTYTIAYTQPCTHSLAQPAMNQATGWSTLTAPPIPGQGGPPAASSLAELLAELTG
PGGRPEERRAALRELQRAGREEPAAAWEEHFKTVLLLLLETLADADHVTRSLALRVLSEF
LRRQPTCFRKYAELTIMKVLEAHRDPHKEVCRAAEETASVLAASLPAEQCLKVLCPIVQT
ADFPINLAAIKMQTRVMQRLPHTALTQLLPDIIPGLLQGYDNTESSVRKASVFCLVAIHT
AIGESLTPYLTHLSGSKMKLLNLYIQRAESNAGPGSPGSPALSLSGHCS
NT seq
4290 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggctcatttgcaagaagatctgctcctacaaggcacacgaggaggatgagccg
gtggagggaaagggagcgccgggaggcaaggccagccgccggggccctggggagggaggg
acaggccgcaggcaggggccctggtcggcaaaggcggccacagggcgggagggtgccgga
gcggtggatgaggaagacttcaccaaggcgtttgaggacgtcccatccgtgcagatctat
tccaaccgcgacctcgaggacgccatgagcaagatccgagacatcctgtcggacgacaag
cacgactgggagcagcgcgtggcggccgtgagggaggtccgctcgctgctcgtggccgga
gccaccaagcacgagggcttcctgcagcagctgcggctcatggacccggcgctcaagctg
agcgtgcgcgacctccgctcgcaggtcgtgcgcgagacctgcatcacgctcgcgtacttg
tcggcgttgctgcggaacaaattcgagttcacggcggaggcggtgctgaccggactgttt
gcgctcgtgccgaacagcgccaaggtcatggccacgtccgggctcgtggcgatccggctc
atcctcaagaacacgcacgctccgcgcctcacccccatcgtctgctccaacgccgcctcc
aaggccgtgtcggtgcgcagacgcagtttcgagttcctggacctcatgttccaggagtgg
cagacggctgcgctggagagacacgtgagcctgctggtggacacggtgcgcaaggggatc
acggacgcggactcggacgcgagactcgaggcgcggaaggcctactgggggctccacaac
cacgcccccggcgcggccaaggcgctgctgacgtcgctggagccgtcgtaccagcgggcc
gtgacggcgcagcgcggcggcgcccaccccaacggctcgggcctcctgcagccgcactcg
gaccgatcgtccagcagctcccaggagagcctcaaccgccacctgggcaagagaggactg
ccccacaacgttcacgtggcaacgaagaccaaagtgccggccggtgcccgcaagcccccg
ccctgcgcgcctggcgcgatgcagcgctcccgcagtgacgtggacgtgggcgcggcgcac
agcgccaaggcgcgcatggcggccggctcggggggcgcctcgggtgcggggtcgggggtc
ggggtcgcgttgggacgcgagcgacccccgacagcaccggcccggcaccacgtgacgagc
agcggatacggcatcctacacaagccgggaggcgtggggtctctgggctctcccggcgaa
cggcacggacgcccagcggcgaaatccgtctcccagaaccagcgcagccgctccagctcc
ccgggccggttcctggcggggatgggaacgagggtatcacgtgggccccgacccccgatc
cctgcgccggcctgcgccctccccgctccgccgctcctgtcccaggtccctcaagcgggg
gcagggggcccctcggggcagcgggtcagccggatcccacgcagcctcgggggcagccga
gactcgagcccggccaggatcgggccctccgttcgggagagccgcatcccccgagtgagc
ttgagccagggctgcagccgcgacacgagcagggagagcagccgcgaccccagccccgtg
cgagcattcacggcgctctcccgcgggagccgcatcccccgagtgagcctgagccagggc
tgcagccgcgacacgagcagggagagcagccgcgaccccagccccgtgcgagcattcacg
gcgcactctacgcgacagcagtctcgctccaccagcgccctcaccaacagctttgtgcct
tcagacccctactcgctgatgcagagccggggaatctcgtcgtccgtgaacgcgatgcga
ttcctcgacccggggtctgacgtggaggcggccgtggcggatgcgctgaccggaagcacc
agagccaagcgcaagccggtgcgccgccgctacgacgcctacgggatgacgtcggacgac
gacgcgatgagcgacgcctccagcgcctgctccgagcgctcgtgcggctcgcgggggtcg
cgaggggctcacggggcccccctcgcgccgggggccccgggcccgtacctcgcgcgccag
gcggaggacgtggccgacatcctcaaccgctgtgccagctccaactgggcggagcgccgc
gacgggctgctcgcgctgcaggcgctgctgcgggcacagcgcacgctcagccgcgtggag
ctcaagcgtctttgtgaaatcttcacgcgaatgttcgccgatccgcacagcaaggtgagt
gcggtgggtgtgccgggtggatctccgacgagagtgacgcgtgctgtaatgtcaccccca
ctcgtgacgcaacgtcgagaggcgaatccgaaatgcccttcttgccattcccctaaagtc
tccaacccctgtgtcccctgtgccccctgtggccccacgtgcccgctgccctggatcggg
attctgcagagagtgttcagcatgttcctggagacgctcgtggactttgtgctgacgcac
cgcgcggagctgcacgactggctcttcgtgctgctcactcagctgctcaagaagatgggc
gccgatctcctgggctccgtgcaggccaaggcccagcgctgtctcgacgtcaccagggaa
tgcttccccccggacctgcagttcaacatcctcatgcgcttcgtggtggaccagacgcag
gtgctcaacctcaaggtgaaggtggcagtgctcaggtacatctgcgcactgagccgcatc
atggagccgcggggctttgtgaacgcgagcgagacgaggctcgccgtgtcgcgcatcatc
acctggaccacggagcccaaaagctcggaagtcaggaaggcggcccaggcggtgctgatt
gcgctgttcgagctgcacccccctgagttcacgatgctgctgggggcactgcccaagacg
ttccaggacggggccactcgcctcctgcacaaccacatcaaggcgacacccaaagccggg
ggcaaccaggcgtccccgagcggagctgcccaccgtgcccccatgcgccccccagcgaac
agggtcagccccgtaacctcgccctccgcctcctcccaggggaccgtgtctcccgggacg
agcgaggcggacggggaggcgggggaggaattctaccgctccctacggggggtgtcgcag
gcgatccagagctacagctaccgcagccaggaggacctcaccgagcagtcgcccgccaac
gccgccgccgccggtcgcgagcagggcacgggggcggcactggggagggagggcgagggg
gggcgggacacccccgacagtgagtggcgctcacaccacaccgcaccaccacgaggtgtg
gtgtggccacacgcacaaacgtacaccattgcttatacccaaccatgtacccactcactc
gctcagccagccatgaatcaagccactggttggtccacactcaccgccccccccatccca
ggccagggtgggcccccggccgcctcgtccctggccgagctgctggccgagctgacgggc
cccggcgggcggcccgaggagcggcgggccgcgctgcgcgagctgcagcgcgccggccgc
gaggagcccgcggccgcctgggaggagcacttcaagaccgtgctgctgctgttgctcgag
acgctcgcagacgcagaccacgtgacccgctcgctggcgctgcgagtgctcagcgagttc
ctgcgtcgccagcccacgtgcttccgcaagtacgcggagctcaccatcatgaaggtcctg
gaggcacacagagacccacacaaggaggtgtgccgcgccgccgaggagacggcgtcggtg
ctggcggcgtcgctgcccgccgagcagtgcctcaaggtgctgtgccccatcgtgcagacg
gccgacttccccatcaacctcgccgccatcaagatgcaaacgcgcgtcatgcagcggctg
ccgcacaccgcgctcacccagctgctgcccgacatcatcccgggcctcttgcagggttac
gacaacacggagagcagcgtgcggaaagcgagcgtgttctgcctcgtggcgattcacacc
gccatcggagagagcctcaccccctacctcactcacctgtctggcagcaagatgaagctg
ctgaatctgtacatccagcgtgcagagagcaatgctggacctggctcgcccggctccccg
gctctcagcctctcgggtcactgcagctga
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