Petromyzon marinus (sea lamprey): 116943854
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Entry
116943854 CDS
T09614
Name
(RefSeq) voltage-dependent L-type calcium channel subunit beta-4-like isoform X1
KO
K04863
voltage-dependent calcium channel beta-2
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04010
MAPK signaling pathway
pmrn04260
Cardiac muscle contraction
pmrn04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
116943854
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
116943854
04261 Adrenergic signaling in cardiomyocytes
116943854
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pmrn04040
]
116943854
Ion channels [BR:
pmrn04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
116943854
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Guanylate_kin
VGCC_beta4Aa_N
SH3_1
Motif
Other DBs
NCBI-GeneID:
116943854
NCBI-ProteinID:
XP_032813003
UniProt:
A0AAJ7TA99
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Position
19:complement(4350958..4525161)
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AA seq
749 aa
AA seq
DB search
MVQQNMSRQSSTSQDIPMDVLDSHGTQSAGKCGHGRGRFKRSDGSTSSDTTTNSFVRQGS
ADSYNSRPSDSDNSLEEEREHLKREAEKQALAQLEKAKTKPVAFAVRTNVSYNGFSDEDA
PVHGTAISFDGKDFLHIKEKYNNDWWIGRLVKEGCEIGFIPSPVKLELIRQQLEQRARQG
RFHAGRPGGNSPSSRGDLMSAKQKQKSLENVPPYDVVPSMRPVVLVGPSLKGYEVTDMMQ
KALFDFLKHRFEGRISITRVTADISLAKRSVLNNPSKRAIIERSNTRSSIDVLAEVQSEI
ERIFELARTLQLVVLDADTINHPTQLAKTSLAPIIVYVKVASPKVLQRLIKSRGKSQSKH
LNVQMVASDKLTQCPQDLFDVILDENQLEDACEHLSEYLEAYWRATHPPSANPPNPLLER
TIGNTAPVSSVQSGGVVASHLVHGEELTDISTPERTSAEPSETDPRRPYSNHHHQHHHQH
QQHHHLQNHQQQQQQQQRVHSPTTPSSSSSRQHLACQWMDGNGGGGGRDGGNGMGPRVGG
DRGTMGGGNNGRMGSLARQDTFDSETQDSRDSAYTEEQGEEDFLEGQPQSHHHQHHQQQQ
QQHHHQQQQYQQQRSRHRSREREYADEESTPPPMTSNDVRQQTSSSSRGSWERNRGRERS
REVDRNERNRQQQQQQQQQQQQQQRHRSRDRSHDRYYEPDGDSGGGGGGGGSGAGGGGGG
GSGGGASSAELMIVKNSSDAWAQDMYVRP
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atggtgcaacaaaacatgtcgaggcagtcatcaacatctcaggatatccccatggatgtt
ctggatagtcacggcacacagtctgccggaaagtgtggtcatggaaggggacgattcaag
cgctccgatggaagcacctcctctgacacgaccaccaacagctttgtgcgccagggttca
gcagattcttacaatagccggccatccgattccgacaactccctggaagaggagcgagaa
cacctgaaacgcgaggccgagaagcaggcgctagcccagctcgagaaggccaagacgaaa
cccgtggcgtttgcggtccgcaccaacgttagctacaatggcttcagcgacgaggacgcc
cctgtgcacggaacggcgatttccttcgacggaaaggacttcctccacatcaaggagaag
tacaacaacgactggtggatcgggcggctggtgaaggagggctgcgagatcggcttcatc
ccgagccccgtgaagctggagctcatccgccagcagttggagcagcgcgctcgccagggt
cgcttccacgcagggagacctggaggtaattctccatcgagtcggggcgacttgatgtca
gcaaaacagaaacaaaaatcgctcgagaatgtgcctccgtacgacgtggtgccatccatg
aggcccgtggtattggtggggccctctcttaaaggttacgaggtaacggacatgatgcag
aaagcactatttgactttttaaagcacaggttcgaggggaggatttccatcacgcgggtg
acggccgatatctccctcgccaagcgctctgtcctcaacaaccccagcaagcgggccatc
atcgaacgctccaacacgcgctccagcattgatgtgctagcggaggtgcagagtgagatc
gagcgaatcttcgagctggcgcggacgctgcagctcgtggtcctggacgccgacaccatc
aaccacccaacacaactcgctaagacctcactcgctcccatcattgtctacgtcaaggtc
gcctctcccaaggttctacagcggctgatcaagtctcgcgggaagtctcagagcaaacac
ctgaatgtgcagatggtggcttctgataaactcactcagtgtcctcaggacctgttcgac
gtgatcttggacgagaaccagctggaggacgcgtgcgagcacctctccgagtacctggag
gcgtactggcgcgccacgcatccacccagcgccaacccgcccaacccgctactggagagg
accatcggcaacacggcgcccgtctccagcgtgcagagcggtggggtcgttgcctcccac
cttgtgcacggtgaggagctcacggacatctctactcccgagcggacttcggccgaaccc
agcgagactgacccccgacgaccctacagcaaccaccaccaccagcatcaccaccagcac
caacagcaccaccacctacagaaccaccagcagcagcagcagcaacagcagcgcgtgcac
tccccgaccactccgtcctcctcgtcgtcccgccaacacctcgcgtgccagtggatggat
ggaaacggcggcggcggcggcagggacgggggtaacgggatggggcccagggtcggaggc
gaccggggcacaatgggaggtggcaacaacggccgcatgggcagcctcgcccggcaagac
acgttcgactcggagacgcaggacagccgagactcggcctacacggaggagcaaggtgaa
gaggactttctggaggggcagccgcagtcccaccaccatcagcaccatcaacagcagcag
cagcagcatcaccaccaacagcagcagtatcagcagcagaggtcccgtcacaggagccgc
gagcgcgagtacgcagacgaggagtcgacgccgccaccgatgacttcgaacgacgtgcgg
cagcaaacctcgtcgtcatcgcggggatcctgggagaggaaccggggtcgcgagcggtcg
agggaggtcgatcgcaacgagcgaaatcggcagcagcagcagcagcaacaacagcaacag
cagcagcagcagcgacacaggtcacgtgatcgctctcacgatcgctactacgagcccgac
ggtgacagtggtggtggcggcggaggtggcggaagtggtgctggtggcggcggaggcgga
ggtagcggtggtggtgcaagcagtgccgagctgatgattgtcaagaattccagtgatgcg
tgggcacaggatatgtacgtgcggccatga
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