Petromyzon marinus (sea lamprey): 116943865
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Entry
116943865 CDS
T09614
Symbol
MLH1
Name
(RefSeq) DNA mismatch repair protein Mlh1 isoform X1
KO
K08734
DNA mismatch repair protein MLH1
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn03430
Mismatch repair
pmrn03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
116943865 (MLH1)
03460 Fanconi anemia pathway
116943865 (MLH1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmrn03400
]
116943865 (MLH1)
DNA repair and recombination proteins [BR:
pmrn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
116943865 (MLH1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Nrap
Motif
Other DBs
NCBI-GeneID:
116943865
NCBI-ProteinID:
XP_032813027
UniProt:
A0AAJ7T861
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Position
19:5300307..5324969
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AA seq
800 aa
AA seq
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MTSRRRFFIFGGEVRCAAVGANRRVKPQRLLRRRRRVDLAAQWDKVQHAMAAPCVIRRLD
EAVVNRIAAGEVIQRPANAIKEMMENCLDAKATSIQVTVKNGGLKLIQIQDNGTGIRKED
MEIVCERFTTSKLEKFEDLSSIATFGFRGEALASISHVAHVTITTKTADSMCAYRAMYCD
GKLKAPPKPCAGNQGTQITAEDLFYNVATRRKALKSASEEHGKITEVVSRYSIHYSGVSF
TLKKQGESTADVRTLPGATTVDNIRAVYGASVARELIEVNYEDKKLVLKMRGYISNANYS
MKKCVFLLFINHRLVDSTALRKAIEMVYAAYLPKNSHPFLYISLELAPQNVDVNVHPTKH
EVHFLHEDSITEAVQQHVESKLLGSNSSRTYFSQALLPNAPLVGLESTQEGGSTRPGPSA
ASDRVYAHQLVRKDARDQKINIFLQPQARAQNTLPKPQQGEMEETDAPSELAMMETLERD
ADVASSPLCKRPRTDADGAMGCEAEAFAGGSRVEEAEAAAAAEEGMEEEQEPLMAAALPK
RRVFSFVSILALQSEITSSKHDGLHEVMKNHTFVGCVDPTWALLQHQTRLYLVNTTKLSQ
ELFYQILIQDFGNFGVLRLSTPAPLYQIIMMALEDPDSGWTEEDGPREELAEHAAAFLNQ
RAEMLQDYFSLEIDQDGNLSGLPLLLDNYIPAMEGLPLFMLRLTTEVNWEEEKECFESFS
RECSAFYSVRKEFTLEETTAETEPSQEPSSTGSPHWKWTVEHCVFKALRSVLLPPRQFAE
DGTLLQIANLTDLYRVFERC
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcacgccgccgtttttttatttttggcggggaagttcgctgcgcggccgtcggc
gcgaaccgtcgagtgaaacctcagcgactgttgcggcgtcgtcgtcgagttgaccttgca
gcccagtgggacaaagttcagcacgccatggctgcaccgtgcgtgatccggcgcctggat
gaggccgtcgtaaatcggattgcggccggggaggtgatccagcgtccagccaatgccatc
aaggagatgatggagaactgtttggatgccaaggccacgagcatacaggtgacggtgaag
aatggaggattgaagcttattcagatccaggacaatggcacgggtattcgaaaggaggac
atggagatcgtgtgtgagcgtttcacaaccagcaagctggagaaatttgaggacctgtct
tccatcgccaccttcgggtttcgtggagaggctctagccagcatcagtcatgtggcgcac
gtgactataactaccaagacagcggacagcatgtgtgcctacagggcaatgtactgcgat
ggcaaactgaaggcgcctcccaaaccatgcgcgggaaaccagggaacgcagattacggct
gaggacttgttctataatgtggcgacccgacgcaaagccctcaagagtgccagtgaggag
cacggcaagatcactgaggtcgtaagccggtattcaatacactactctggagtaagtttt
acactgaagaagcaaggagagagcacagcagacgtgcgcacacttcctggagccacgacg
gtggacaacattcgagccgtgtatggagcatccgttgctcgggagctcattgaggtgaac
tatgaagataaaaagctggtgctcaaaatgcgaggctacatctccaacgccaactactcc
atgaagaagtgcgtcttcctgcttttcatcaatcaccggcttgtggactcgacggcgctg
cggaaggcaatcgagatggtgtacgcggcgtacctccccaaaaactcgcaccccttcctc
tacatcagcctggagctggctccacagaacgtggatgtcaacgttcaccccaccaagcac
gaggtgcatttcctgcacgaggacagcatcacggaggccgtgcagcagcatgtggagagc
aagctgctcggctccaactcctcgcgcacgtacttctcacaggcgctgttgccgaatgct
ccactggtggggctcgagtccacccaggaaggtggcagcaccaggccgggaccctctgca
gcctcggaccgcgtgtacgcccaccagctggtgcgcaaggatgcgcgcgaccagaagatc
aacatcttcctgcagccccaagcacgagctcagaacacactccccaagcctcagcaaggg
gagatggaagagacggacgcaccgagtgaacttgccatgatggagacgctggaacgtgat
gcggatgttgccagctctcctctctgtaagaggccgcgcacggacgcagatggggcgatg
ggctgcgaggcggaggcctttgcaggtggctcaagagtggaggaagcggaggcggcggcg
gcggcggaagaggggatggaggaggagcaggagccactgatggcagccgccctccccaag
cgccgtgtcttcagcttcgtcagcattcttgctctgcagagtgaaatcacctccagcaaa
cacgatggcctgcatgaggtgatgaagaaccacacgtttgtgggctgtgttgacccgact
tgggctctccttcagcaccaaaccaggctctaccttgtcaacaccacgaagctcagccaa
gagctattttaccagatcctcatacaagactttggaaactttggagttcttcgtctctct
actccggcacccctgtaccagattatcatgatggcgcttgaggatccggacagcggctgg
acagaggaggacggtcctcgggaggaacttgcagagcacgcagctgccttcttgaaccag
cgggcggaaatgctgcaggactatttctccctcgagatcgatcaggatggtaacctatct
ggactccctctgctgcttgacaattacatcccagctatggaggggcttcctctattcatg
cttcgcctcaccacagaggtgaactgggaggaggagaaggagtgctttgaatctttcagc
cgcgagtgcagcgcattctactcggtgcgcaaagagtttaccctggaggagacgacggcc
gaaactgagcccagccaggagccaagcagcacaggctctccgcattggaagtggacagtg
gaacactgtgtcttcaaggccctgcgctctgtcctgctgccgcctcggcagtttgcggag
gatggaacgctgctgcagatcgccaacctcaccgacctctacagggtgttcgagagatgc
tag
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