Petromyzon marinus (sea lamprey): 116943987
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Entry
116943987 CDS
T09614
Symbol
HSPD1
Name
(RefSeq) LOW QUALITY PROTEIN: 60 kDa heat shock protein, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116943987 (HSPD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmrn03019
]
116943987 (HSPD1)
03110 Chaperones and folding catalysts [BR:
pmrn03110
]
116943987 (HSPD1)
03029 Mitochondrial biogenesis [BR:
pmrn03029
]
116943987 (HSPD1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmrn04147
]
116943987 (HSPD1)
Enzymes [BR:
pmrn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
116943987 (HSPD1)
Messenger RNA biogenesis [BR:
pmrn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
116943987 (HSPD1)
Chaperones and folding catalysts [BR:
pmrn03110
]
Heat shock proteins
HSP60 / Chaperonin
116943987 (HSPD1)
Mitochondrial biogenesis [BR:
pmrn03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
116943987 (HSPD1)
Exosome [BR:
pmrn04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
116943987 (HSPD1)
Exosomal proteins of other body fluids (saliva and urine)
116943987 (HSPD1)
Exosomal proteins of breast cancer cells
116943987 (HSPD1)
Exosomal proteins of colorectal cancer cells
116943987 (HSPD1)
Exosomal proteins of bladder cancer cells
116943987 (HSPD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
116943987
NCBI-ProteinID:
XP_032813274
UniProt:
A0AAJ7WX02
LinkDB
All DBs
Position
19:13917711..13925297
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AA seq
577 aa
AA seq
DB search
MLRVPALARSLRPVTRALAPPRGTRAYAKDVRFGSEARALMLQGVDLLADAVAVTMGPKG
RTVIIEQSWGSPKVTKDGVTVAKAIELKDRFKNIGAKLVQDVANNTNEEAGDGTTTATVL
ARAIAKDGFEKISKGANPVEIRRGVMLAVEAVVAELKKLSKPVTTPEEIAQVATISANGD
KEIGNLISDAMKKVGRKGVITVKDGKTLHDELEIIEGLKFDRGYISPYFINSAKGQKCEF
QDAFLLISEKKISSVQSIVPALELANAQRKPLVIIAEDVDGEALSTLVLNRLKVGLQVCA
VKAPGFGDNRKNTLKDLAVATGGTVFGDEALSVNVEDVQLHDFGRVGEVTITKDDTMVLK
GKGERAAIEKRIEEIVEQLEATTSDYEKEKLNERLAKLSDGVAVLKVGGTSDVEVNEKKD
RVTDALNATRAAVEEGIVLGGGCALLRCLPALDAIAPANSDQQIGIEIIRNALRVPAMTI
ARNAGVEGSLIVEKILQSANDIGYDAMTGEFVNMVEKGIIDPTKVVRTALVDAAGVASLL
ATAEAVVTEIPKEEKAAGMGGGGGMGGMGGMGGGDMF
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgctccgtgtgccggctctcgcgcgctccctgcgccccgtgacgcgtgccctggcgccc
ccccggggaacccgcgcctacgccaaggatgtccgcttcggcagcgaggcccgcgccctc
atgctgcagggcgtggacctcctcgccgacgccgtcgccgtcaccatggggcccaagggc
cgcacggtcatcatcgagcagagctggggcagccccaaggtgaccaaggatggcgtaacg
gtggccaaagccatcgagctcaaggaccggttcaagaacatcggcgccaagctggtgcag
gacgtcgccaacaacaccaacgaggaggccggagatggaaccaccaccgccacggtgctg
gcgcgcgccattgccaaggacggcttcgagaagatcagcaagggcgccaaccccgtggag
atccgcagaggagtcatgctggccgtagaggcggtggtggctgagctgaagaaactctcc
aagcctgtaacgacgcccgaggagatagcacaggtggccaccatctcggcgaacggggac
aaggaaatcggaaacctcatctcggacgcgatgaagaaagttgggcgcaagggcgtcatc
accgtcaaggatggtaaaaccctgcacgacgagctcgagattatcgagggactgaagttt
gaccgcggctacatctccccctacttcatcaactcggcaaagggccagaagtgcgagttc
caggacgcgttcctgctgatcagcgagaagaagatctcgagcgtgcagtccatcgtgccg
gcgctggagctggccaacgcgcagcgcaagccgctcgtcatcatcgccgaggatgtggac
ggggaagcgctcagcaccctcgtgctcaaccgactcaaggtcggactccaggtctgcgcc
gtcaaggccccgggcttcggggacaaccgcaagaacactctcaaggacctggcggtggcg
accggcggcaccgtgtttggcgacgaggcgctgtccgtgaacgtggaggacgtgcagctg
cacgactttgggcgcgtgggcgaggtgaccatcaccaaggacgacacgatggtgctcaag
ggcaagggcgagcgcgccgccatcgagaagcgcatcgaggagatcgtggagcagctggag
gccacgacgagcgactacgagaaggagaagctcaacgagcggctcgccaagctctctgac
ggggtcgccgtgctcaaggtgggcggcacgagcgacgtggaggtgaacgagaagaaggac
cgcgtgacggacgcgctgaacgcgacgcgcgccgccgtggaagagggcatcgtgctgggc
gggggctgcgcgctgctgcgctgccttcccgcgctcgacgccatcgcccccgccaacagc
gaccagcagatcggcatcgagataatccgcaacgcgctgcgcgtgccggcgatgacgatc
gcacgcaacgcgggcgtggagggctccctcatcgtggagaagatcctgcagtcggccaac
gacatcggctacgacgccatgacgggcgagttcgtcaacatggtggagaagggcatcatc
gaccccaccaaggtggtgaggacggcgctggtggacgcggccggcgtggcgtcgctgctc
gccacggccgaagcggtcgtcacggagatccccaaggaggagaaggcggccgggatgggg
ggcggcggcggcatggggggcatggggggcatggggggcggagacatgttctga
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