Petromyzon marinus (sea lamprey): 116944013
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Entry
116944013 CDS
T09614
Name
(RefSeq) partitioning defective 3 homolog isoform X1
KO
K04237
partitioning defective protein 3
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04144
Endocytosis
pmrn04517
IgSF CAM signaling
pmrn04520
Adherens junction
pmrn04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
116944013
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116944013
09144 Cellular community - eukaryotes
04520 Adherens junction
116944013
04530 Tight junction
116944013
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pmrn01009
]
116944013
Protein phosphatases and associated proteins [BR:
pmrn01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
116944013
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Par3_HAL_N_term
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
116944013
NCBI-ProteinID:
XP_032813307
UniProt:
A0AAJ7WXD4
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Position
19:14174184..14244715
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AA seq
1337 aa
AA seq
DB search
MKVTVRFGRTRVVLPCGDGSQRVRDAVTEAVRRYRKALGKDSSYWVQVQHLEHKDGGILD
DDDLLRDVCDDKDKLIAIYEEQEPQPGGGGDCTSTSSTGTQSPDMFGSEVEPPGHAAATT
AFNEIEVTPSALRATTPLHVRRSSDPALAGSASELVQPGLTVAGDGGRRPQTHWSTTNLH
QPAEPPPTQNSTGGGSEGGLGPMGEGHLPGFQRDLSRSSVGLTHPIVEKWLERQEAVENG
EKEEGSGHKRDEIVKPTSRAATPHPRDFKKLVEVVNDGGPLGIHVVPFLTKSGRSLGLRI
RTIEEGSRTQREGALRQNDCITRINHTRLTDTSFEESQKAFREALKSSVLQLWVVHGEKR
EHYEQVMQLWGNQESEQIDSDSAEDIDEDYEDEGPPSFKVPPPVAPKPTMKPVAGLSSRK
QEPPSGAGASAKVTPKSLLIAPARRMPIPAAFLAATDANSGTASSAQPIPAETQQHKPPA
QVPRKIPGPRSATGSTFGGDTTSAQLASPTKAPVKADVKLQQATAAVAAAVSAAVASRIP
TASSSMAAPAATPNVAYTTKKVDKKIPIHLKKGLDGLGFTIATRDTPVGGRTPIYVKSIM
SKGAALSDGRLKSGDRLLEVNGLDVTSRTQEEVVAILRSTKLGGSVDLLVSRHHDVPLSP
DDPPERPQVGSAAEEEDRLLSPDGSREFLTLHIPLHDMGAASLGVSVKGTKDRRTNADLG
IFIKTIIAGGAAAKDGRLRVDDQLIAVNRESLLGRSNLEAMESLRCAMSRDAGDPSLIQL
VVARSLGKPGPTEVESHAPGSAGNTAEVNERRVSATQSPVAAPDLGPVDKSAKPASTGAW
QGTTDRDDLGGQERKAPQARSVPWEPGTSSTQGQLDPALAFQREGFGRQSVSEKRTVQYG
DPSHLEVLKARKSKSMDMIADEGSVHASAETRKGPSDGSVGPALGLKMSSSLESLQTAVA
AEGGHAEFLFHRPRPPRLIRGRGCNASFRAAIDKSYDTPQDGSDDDDDEDDEEEEDAMDT
VEEEEEDPEEAAKGLGDGVSGAPTGLPVPSGSAKTKRSSPRSKDATLESGAAGDKECKKD
KKAKKLKSLGMVFRFGKVKKEDKSEQKSGDKQKVVDNKTATEEEKEKMRDEQERIQTKHR
EIRERQARELKLQQEREQLAAQSRGTSGYYEEHNPAYASLGPSASPPALHKPPYVKNTKA
YASEDEIRAMYAKVNKAGSLPKPVPQSERMLAGGRVNSYYEECNPIYGRTRDGVPRHPQA
SGGGPRYHRGEDGQDGDPARDIYARVAKTSSLPRPQPDSRATHGYQWVQREGGSTARDGS
DDKRAPSGAEHSRVSVN
NT seq
4014 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtcacggttcgctttggccgcacgcgggtggtgctgccgtgcggggacggctcc
cagcgggtgcgggacgcggtgaccgaggcggtgaggcgctacaggaaggcgctgggcaag
gactcctcctactgggtgcaagtgcagcacctggagcacaaggatggtggaatccttgat
gatgacgatctcctccgggatgtttgtgacgataaagacaagctgatcgccatctacgag
gagcaggagccccagccgggcggcggcggggactgcacaagcaccagctccacgggcacg
cagagccccgacatgttcggcagcgaggtggagccgccaggccatgccgctgccaccacg
gccttcaacgagatcgaggtcacaccctcggccctccgagccaccactccgctacacgtg
cgacgcagcagcgaccccgcgctggctggatccgcgtcggaactggtccagcccggcctt
acggtcgcgggtgacggtggccgcaggccacagacgcactggtctaccacgaacctgcac
cagccggccgagccaccccccacgcagaacagcacgggtggagggagtgaagggggattg
gggcccatgggggaggggcacctgccggggttccagcgggatctgtcgcgttcctcggtg
ggcctcacgcaccccatcgtggagaagtggctggagaggcaggaggccgtggagaatggg
gaaaaggaagagggcagtggccacaaacgggatgagatcgtcaaacccacgtcccgcgcg
gccaccccccatcccagggacttcaagaagctggtggaggtggtgaacgacgggggcccg
ctcggcatccacgtggtgccctttctcaccaagagcgggaggagcctgggcctgcggatt
cgcactatcgaggaaggcagcaggacccagcgcgagggggctctgcgccagaacgactgc
atcacgcgcatcaatcacacacgcctcaccgatacctcctttgaggagtcacaaaaggct
tttcgcgaggccctgaagagcagcgttctgcaactgtgggtcgttcacggggagaagcga
gaacactacgagcaggtgatgcagctgtggggcaaccaggagtccgagcagatcgattcc
gactcggccgaggacattgatgaagattatgaggacgagggcccaccgtccttcaaggtg
cccccgccggtggcaccaaaacccaccatgaaaccagtggcagggctaagcagcaggaag
caggaaccgccttcaggtgccggtgccagtgccaaggtcacccccaagtctcttctcatt
gcacctgcgcggaggatgccgataccggcagctttcctggcggcgacagacgcgaattct
ggaacggcttcctctgctcagccaatcccagctgagacccagcagcacaagccaccagca
caggtgcccaggaaaatcccaggccctaggtccgcgacagggtcaacgttcggtggtgac
actacgtcagcacagctggcgtctcccacgaaagccccagtgaaggccgacgtaaagcta
cagcaggcgacggcagcagtggcagcggctgtatctgccgccgttgcgagtcgcatcccc
acggccagctccagcatggctgcccctgcggccacgcccaacgtcgcctataccacaaag
aaggtggataagaagattcctattcacctgaagaaaggtctcgacgggctaggcttcacg
atcgcgacacgcgacacgccggtgggaggccgcacgccgatctacgtgaagagcatcatg
tccaagggcgcggcactgagtgacggccgcctcaagtctggagatcggctcctggaggtg
aacgggctggacgtgacgagtcgcacgcaggaggaagttgtggcgattctgcgcagcact
aagcttggcggctccgtcgacctgctggtctcgcgccaccacgacgtccccctctcccca
gatgatccgccggagcgcccacaagtaggcagtgcggcagaagaagaggatcgcttgctt
tcccctgacggttcccgcgagttcctgacgctccacatccccctgcacgacatgggcgct
gcgagcctcggggtcagtgtcaaggggaccaaggatcgccgaacaaacgcggatctgggc
attttcatcaagaccatcatcgcgggaggggcagctgccaaggatgggcgcctacgtgtg
gacgatcagctgatcgccgtgaaccgcgagtcgctgctcggtcggtccaacttggaggcc
atggagtctctgaggtgcgccatgtcccgcgatgccggcgacccctcgcttatccagctc
gtggtggctcgctcgctcggcaagccaggaccgacggaggtggagtcacacgcgcctggg
tcagcggggaacacggcggaggtcaacgagcgccgggtgtcggccacgcagagccccgtg
gcggctcctgacctggggcccgtcgacaagtctgctaagccggcgagcacaggagcctgg
caaggcacaactgaccgggatgacttgggtggccaggagaggaaggcaccacaggcccgg
agcgtcccctgggagcctggcaccagcagcacacaggggcaactggacccagcgctggcc
tttcagcgggagggatttggccgacagagtgtatcggagaaacgcaccgtgcagtatgga
gaccccagccacctggaggtgctcaaggcacgcaagtccaagagcatggacatgatcgca
gacgaaggtagcgtgcatgcgtctgctgaaacacgcaaaggtccctcagacggctccgtt
gggccagccttgggcctcaagatgagcagctcgctggagagtctgcagacagctgtggcc
gcggagggtggccacgctgagttcctcttccaccggccgcgccccccccgtctcatccgc
ggccgtggctgcaacgcgagcttccgtgcggccatcgacaagtcgtatgacacgccccag
gatggcagcgacgatgacgatgatgaggatgacgaggaggaggaggatgcaatggacact
gtggaggaagaggaggaggacccggaggaggcggccaagggcctgggagatggcgtttct
ggagcccccaccggtcttcctgtcccaagcggtagcgccaagaccaagcgcagctctccc
aggagcaaagacgcaactctggagtctggcgcagctggcgacaaggagtgcaagaaagat
aagaaagccaagaagctcaagagccttggcatggtgttcaggtttggaaaagttaagaaa
gaggacaagagtgagcagaagagtggggacaagcagaaggtggtggacaacaagacggcc
acagaggaggagaaggagaagatgagggacgagcaagagaggatccagacaaagcacagg
gagattcgcgagcggcaggctcgcgagctgaagctgcagcaggagcgcgagcagctcgcc
gctcagtcgcgcggcacgtctggctactacgaggagcacaacccagcctacgccagcctg
ggtccctccgcgtcaccgcctgctttgcacaaaccaccctacgtgaagaacaccaaggcc
tatgccagcgaggacgagatccgagccatgtacgccaaagtgaataaggcgggtagcctg
ccgaagcctgtcccccagtcagaaagaatgctggcagggggtcgtgtgaactcctactac
gaggagtgcaacccgatatacggccggacgcgggacggtgtgcccaggcacccccaagcc
agtggtgggggcccacgctatcaccgcggggaggacgggcaagacggcgaccccgcgaga
gacatctatgccagggtggctaaaaccagcagtctgcccaggccccagcccgacagcaga
gccacacatggctaccagtgggtacagagagaagggggatcgacagctcgtgatgggtct
gatgacaaaagggcaccttctggtgcagagcactctcgggtgagtgtcaactga
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