Petromyzon marinus (sea lamprey): 116944110
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Entry
116944110 CDS
T09614
Symbol
RBM39
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmrn03041
]
116944110 (RBM39)
Spliceosome [BR:
pmrn03041
]
Common components
Common spliceosomal components
General mRNP proteins
116944110 (RBM39)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RBD_DEAH11
PRP38_assoc
RRM_7
Motif
Other DBs
NCBI-GeneID:
116944110
NCBI-ProteinID:
XP_032813427
UniProt:
A0AAJ7T8Y8
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Position
20:complement(3753864..3781591)
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AA seq
495 aa
AA seq
DB search
MAEDFDIEALLEAPFQKTEATKVGEANGHPLTDTKKKKSRSRSRSRDKKRSRSRDRRRRK
SRERRRRSRSRSRDRTRHREERGRFRSPIHKRSRSKSRSPRGKFGNAPRPSTSTLTPEER
DSRTVFCMQLAARIRAKDLEEFFSAVGKVRDVRLISDRNSRRSKGIAYIEFVDLDSVPLA
IGLTGQRLLGVPIIVQASQAEKNRAAAAAAANLQKLASGPMRLYVGSLHFNITEAMLMGI
FEPFGKIDNIQLMMDPETGRSKGFGFITFSSADCAKKALEQLNGFELAGRPMKVNYVSDH
SDVIISVGSGGGGSSFLDNDELERTGIDLTNTGRLQLMAKLAEGSGLTIPPVAQQALQMN
GAIPLEALMPSLAASMNPTFTMSPTIATQCFQLSNMFNPQSEVNSSWVQEIRDDVVEECN
KHGGVVHIYVDQNSAEGHVYVKCPNIPVALAAVNSLHGRWFAGKMITAAYVPVPTYHNLF
PDSMNALQLLTPMRR
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagactttgacattgaagccttgctggaggcacctttccaaaagacggaggcc
accaaagtgggtgaagcgaatggacacccgctaactgacacaaagaaaaagaagagcagg
agtcgcagcagaagcagagacaagaagaggagccgcagccgagatcggcggcgcaggaaa
agccgcgagcgccgccgccgcagccgtagtcgcagccgggaccgaacccggcaccgcgag
gagcgtggacgcttccgcagcccaatccacaaacgctcccgtagcaagagcagaagcccg
agaggaaaatttggaaatgctccaaggccatccaccagcacgctcaccccggaggagaga
gacagtcgtaccgtgttctgcatgcagcttgcagcgcgcatccgtgccaaggacctcgag
gagttcttctccgctgtgggcaaggtgcgcgacgtgcgcctcatctcggaccgcaactcg
cgccgctccaagggcatcgcgtacatcgaatttgtggatcttgactcggtgccactggca
atcgggctcacgggacagaggctgctgggcgtgcccatcatcgtgcaggcatcgcaggct
gaaaagaatcgtgccgcagctgctgctgctgccaaccttcagaaactggcatcggggccc
atgcgcctgtacgtgggctcccttcacttcaatatcaccgaggccatgctcatgggcatc
ttcgagccattcgggaagattgataacatccaactgatgatggaccccgagactggcagg
tccaagggctttggattcataacgttttcgagcgccgactgcgccaagaaggcgcttgag
cagctgaacggctttgagctagccgggcgacccatgaaggtgaactacgtgtcggaccac
tcggatgtcatcatcagcgttggcagcggcggaggtggttcatccttcctggacaacgac
gagctcgagaggacgggcatcgatctcaccaacacgggccgcctgcagctcatggccaag
ctggctgagggttctgggctcactataccacctgtagcgcagcaggctctgcagatgaat
ggagccattcccctggaagcattaatgccctccctagctgcatccatgaacccaaccttc
accatgtctccaaccatcgccactcagtgcttccaactctccaacatgttcaatccacag
tcggaggtgaattccagctgggtgcaagagatccgggatgacgttgtggaggagtgcaac
aagcacgggggcgtggtgcacatctacgtcgaccagaattcagccgagggccatgtgtat
gtgaaatgtcccaacatacccgtcgcacttgctgctgtcaactctcttcacggtcgctgg
tttgcaggtaagatgatcacggcagcatacgtccctgtgcccacctatcacaacctcttc
ccggactccatgaacgcattgcagctactcacgcccatgaggagatga
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