Petromyzon marinus (sea lamprey): 116944117
Help
Entry
116944117 CDS
T09614
Name
(RefSeq) retinoblastoma-like protein 1 isoform X1
KO
K04681
retinoblastoma-like protein 1
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04110
Cell cycle
pmrn04218
Cellular senescence
pmrn04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
116944117
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
116944117
04218 Cellular senescence
116944117
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmrn03000
]
116944117
Transcription factors [BR:
pmrn03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
116944117
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
TFIIB
Rb_C
Motif
Other DBs
NCBI-GeneID:
116944117
NCBI-ProteinID:
XP_032813440
UniProt:
A0AAJ7WXB6
LinkDB
All DBs
Position
20:complement(4269410..4311545)
Genome browser
AA seq
1158 aa
AA seq
DB search
MTKSEDENADEVGGGCGGGGRNGVRAKFEELCQDLNMDESTVHEAWAGFEKIRTNFTLEG
DELHWLACALYVACRKTLIPTVGRGTLEGNCVSLTRILRSSKLRCLVLPPPPHAHSVHSL
IAFFGKMKKWGEMAQVGSDFRCRIERLERNFAVSTVIFKKLEPIFLSLFRDPQDEAPRQP
RGRKQRRLPCTVSDLFKFCWTLFVRTKANFPMISDDLVNSYHLLLCCLDLMYGNALLSSH
RKDLLNPNFQGLPEEFGNKDFRPPAEPPCIIDQLCVLHDGIVLEAKGIKEHYWKPYVRKL
FERKILKGKIDTLSGFLDVSSFTDNEKAINREYEEYVLTVGDFDERVFLGEDADEELGTP
QKGTVMPGTPGVGHELAEKMKIKRNLQQHFEKTRSLAPSTPLTGRRYLKEKEQGFTPVST
ATQSVGRLQALLSGLRGAPSENLLTMLRSSSRDQTEAVQTRVREMGATFCKHYTGPSDGQ
PGSQIDFAQKRLKLAEILYYKVLEGVITQEKKRVQGKDLTTLLEQDVFHRSLMACCLEIV
LFSYNSQRTFPWILDTLSISPYSFYKVIEVLIRAEEGLSRDMVKHLNHVEETVLESLAWR
RDSPLWDALHAAHAAGTPTCEEVTLPNHLESIPAPAIVHPRVREVRTEACPITMKVAGDA
PQSPFSAHDRYSSPAAGTARRKLFTDSLAMASIASSTSQSSSTTATAAPPSSAVADGLAA
PAASVLGPRGLLNVPSVTPLPGHTMLTVATATVTATNGQSVTIPVRGITSDSGTITFVPV
TVNVAGGHPPTLQATQLLSQTLTARRKEGPALCAASAVTAAADGEAAAAGAGTTMSRPKR
TGSLALFFRKVYHLASVRLRDLCQKLDVSPELRSKVWTCFEHSLVHCTNLMADRHLDQLL
MCAIYVMAKVTKSERSFQDIMKWYRSQPQANSHVYRSVLLKGRRRRRNSGSSEGSTEARD
RGERESSPPSMRSSSTLPVPHPSSAPPTPTRLLGSSCHPDNEDEEEEERGDLIQFYNQTY
ISCIRTFALKYTGNNLETAKEVPPLSPLPLLRTHPCSPRRVSHMHPIYVSPHKNGAPFSP
RSRLLYCFNQSPSRNLRQINSMISCGESGAAAAAAAAAARKRSLPLDDVPDSPAKRPRPD
ESVWLRRLQDVASERVVQ
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaaagcgaggacgaaaacgccgacgaggtcggcggcggctgcggtggcggcggc
cgcaatggcgtgcgggctaagttcgaggagctctgtcaggacctgaacatggacgagtcg
acggtgcacgaggcgtgggccggcttcgagaagatccgcaccaacttcaccctcgagggc
gatgagctgcactggctggcatgcgcgctgtatgtggcatgtcgcaagacgctcatcccc
accgtgggccggggaacgcttgagggaaactgcgtgtctctgacacgcatcctgcgctcc
tccaaactaaggtgcctggtcctgccgcccccaccccacgcccactctgtccacagcctc
atcgccttctttggcaagatgaagaagtggggggaaatggcgcaggtgggctccgatttc
cgctgtcgcatcgagcgcttggagagaaactttgccgtctccactgtcatcttcaagaag
ctggagcccatcttcctgagcctgttccgcgacccacaggacgaagcaccacgtcagcca
cgtgggcgcaagcagagacgcttaccctgcactgtctcggacctgttcaagttctgctgg
acattatttgtacggacaaaagccaactttcctatgataagcgatgatttggtaaactcg
tatcacctcctgctgtgctgcctggacctcatgtatggaaatgccctcctgagctctcat
cgcaaggatcttctcaacccaaacttccagggccttccagaagaatttggcaacaaggac
ttccgtccgccagcggagcccccgtgcatcatcgaccagctgtgcgtgctgcatgacggc
atcgtactggaggccaagggcatcaaggagcactactggaagccgtacgtccgcaagctg
tttgagcgcaagattctgaaaggaaaaatcgacaccctttctggatttcttgatgtttca
tcttttacagacaatgagaaagccattaaccgggagtacgaggagtacgtgctgacggtg
ggcgactttgacgagcgtgtgttcctgggcgaggacgccgacgaggagctcggcacaccg
cagaagggcacggtgatgccaggcacgccgggggtgggccatgagctcgccgagaagatg
aagatcaagcgcaacttgcagcagcattttgagaagactcgctcgctggcgccctccacc
ccactgacgggccggcgctacctcaaggaaaaggagcagggcttcactccagtgtcaacg
gcgacacagagtgtgggccgcctgcaggccctgctgtcaggcttgcgcggggcacccagc
gagaacctgctcaccatgctgcggtcatcttcgcgtgatcagaccgaggcggtgcagaca
cgggtgcgggagatgggtgcaacattctgcaaacactacactgggcccagcgatgggcag
cctggctcgcagatagactttgcccagaaacggctgaaattggcagagatcctgtactac
aaagtgctggaaggtgtcatcacacaggagaagaagagggtacaagggaaagacctcaca
actctgctggagcaggatgtgtttcaccgctcgctcatggcatgctgcctggagattgtg
ctcttctcctacaactcgcagcgcacattcccctggatcctcgacacgctcagcatcagc
ccctactccttctacaaggtcatagaagtactgatccgtgcagaggagggcctctcacgg
gacatggtgaaacacctgaaccatgttgaggagacggtgctggagagcctagcgtggaga
cgcgactccccgctctgggacgccctgcatgcagcccatgccgccggcacgcccacctgc
gaggaggtgacactaccaaaccacctggaaagcattccagctcctgccattgttcatccg
cgtgtgcgtgaagtccgcaccgaagcttgccccatcacaatgaaagttgcaggtgacgca
ccacagtccccgttctcggcgcatgaccgatacagctccccagccgctgggaccgctcgc
cgcaagctgttcacagactcattggcgatggcgtccatcgcctcctcgacatctcagtct
tcctccactactgccaccgccgcccccccatcctcggcggttgctgacggcttggcggcg
cctgcagcctccgtgctggggccgcggggactgctgaatgtgccgtccgtgacgccgctg
cccggacacaccatgctcaccgtagccacggccaccgtcactgcgactaatggccagtcg
gtcaccattcctgtgcgaggcataaccagtgacagtggcaccatcacgttcgtgccagtg
acggtgaatgtggcagggggtcacccgccaacgctgcaggccacgcagttgctgtcgcag
accctgaccgcccgccgtaaggagggccccgccctgtgcgctgcgtcagcagtgacagcc
gcagctgatggggaagcagctgcagcaggggccggcactaccatgagcaggcccaagcgc
actggctccctagcactcttcttccgcaaggtataccacctggcgagcgtgcggctacgc
gacctctgccagaagctggacgtgtcgccggagctccgcagcaaagtgtggacttgcttc
gagcattctcttgtgcactgcaccaacctcatggctgataggcaccttgatcaactgctc
atgtgcgccatctatgtcatggccaaggtgacgaagtcggagcgctcattccaggacata
atgaagtggtatcggagccagccccaggccaacagtcatgtttaccgcagcgttctgctc
aaaggccgcagacgcaggaggaactcgggcagcagtgagggcagcacagaggcacgggac
cgaggagagcgcgagtcaagcccccccagcatgcgatccagcagcaccctgcccgtgcct
cacccgagcagcgcaccaccgacgcccacacgcctcctgggctcaagctgtcaccccgac
aatgaggatgaggaggaagaggagaggggtgacctcatccagttctacaaccaaacctac
atctcttgtatccgcacctttgcgctcaagtacaccggcaacaacctggagactgccaag
gaggtgccacccttgtcgccgttacctcttctgcggacgcacccgtgctctccgcgccgc
gtgtcccacatgcatccaatctacgtgtcgccacacaagaatggcgcgcccttctcccca
cgcagccgtttgctctactgcttcaaccagagcccctccaggaacctgcgtcagatcaat
tccatgatcagctgtggcgagagtggcgctgctgccgctgctgctgctgcagcagctcgc
aagcggtctctgccactggacgacgtgccagactccccagccaagcggccacgccctgac
gagagtgtgtggctccgccggctgcaggacgtagccagcgagcgcgtcgtgcagtga
DBGET
integrated database retrieval system
