KEGG   Petromyzon marinus (sea lamprey): 116944274
Entry
116944274         CDS       T09614                                 
Symbol
EXOSC7
Name
(RefSeq) exosome complex component RRP42
  KO
K12589  exosome complex component RRP42
Organism
pmrn  Petromyzon marinus (sea lamprey)
Pathway
pmrn03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pmrn00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    116944274 (EXOSC7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pmrn03019]
    116944274 (EXOSC7)
Messenger RNA biogenesis [BR:pmrn03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     116944274 (EXOSC7)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     116944274 (EXOSC7)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 116944274
NCBI-ProteinID: XP_032813704
UniProt: A0AAJ7TAA0
LinkDB
Position
20:complement(13734499..13740851)
AA seq 292 aa
MAALLMLSEAEKAFIVHGVQDGVRGDGRGCEDFRVVELETEVVSNTSGSARLRLGQTDVL
VGVKAELGSPRLDCPDEGYLEFFVDCSANATPEFEGRGGEDLSLEISSALQRSFAHAGCL
DLRSLCILPRQQCWVLYVDVLLLEYGGNVFDAASIAVKAALFNTRIPTVHVSEDEEGVRE
IELSDDPYDCVRLEVARVPCIVTLSKIGQRHVVDASLEETCCCRASLMVSVTAAGAITGL
RKAGPGSLHPDSVCHMIETGKRVGVSLHKALDAVLQHEESQGTKREKVGFLG
NT seq 879 nt   +upstreamnt  +downstreamnt
atggcggccctgctgatgctaagcgaggcggagaaggccttcatcgtgcacggcgtgcag
gacggagtccgcggggacgggagaggatgcgaggacttccgcgtggtggagctggagacc
gaggtggtgtccaacacgagcggctccgctcgcctccgcctgggtcagacggacgtattg
gtgggagtgaaggctgagctgggctcgccgcgtctggactgccctgatgagggatacctg
gagttcttcgtcgactgctccgcgaacgccaccccggagtttgagggccggggcggcgag
gacctgagcctggagatctcgagcgcgctgcagcgctcgtttgcgcacgccggctgtctc
gacctgcgctcgctctgcatcctcccgcgccagcagtgctgggtgctctacgtggacgtg
ctgctgctggagtacggaggaaacgtgttcgacgccgcctccatcgccgtcaaggccgct
ctcttcaacaccaggatcccgacggtgcacgtgagtgaggacgaagagggcgtgcgggaa
atcgagctgtccgacgacccctacgactgcgtgcgcctggaggtggcgcgcgtgccgtgc
attgtcacgctcagcaagatcgggcagcggcatgtggtggacgcgtcgctggaggagacc
tgctgctgccgcgccagcctcatggtgtccgtgacggcggcgggcgcaatcaccggcctg
cgcaaggccgggcccggcagcctccaccccgacagcgtgtgtcacatgatcgagaccggc
aagcgagtgggcgtgtcgctgcacaaggccctggacgccgtcctgcagcacgaggagtcg
caaggcaccaagagggagaaagtcggcttcctcggatga

DBGET integrated database retrieval system