Petromyzon marinus (sea lamprey): 116944287
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Entry
116944287 CDS
T09614
Symbol
CNOT10
Name
(RefSeq) CCR4-NOT transcription complex subunit 10 isoform X1
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116944287 (CNOT10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmrn03019
]
116944287 (CNOT10)
Messenger RNA biogenesis [BR:
pmrn03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
116944287 (CNOT10)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_12
TPR_8
TPR_14
TPR_19
ARM_TT21_N
TPR_10
TPR_7
Motif
Other DBs
NCBI-GeneID:
116944287
NCBI-ProteinID:
XP_032813735
UniProt:
A0AAJ7TB60
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Position
20:complement(14045264..14069264)
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AA seq
777 aa
AA seq
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MLLGPTSGQRSKGREICGVVPSTLVDSSTSGRGVQGGSDSMNQLGGDARSDGTSCSSGIS
SQEKDLAKKALDAFEVGQYDSCLAQLSSLGELRRDDHKVQLNRSVAEFYRSGQTATDDLR
HSLAQVRMQVHSTAEEMDGLEDVENGTLLYNQAVLLCHFKQYHQAIAVVERLYQFIEPFE
ERFARAVSFLLMDLYLVTHQAEKALPLLAVLEKLSSQGSGANANGKAGEVAKDAGSQKPD
TSSNEQTRSKIHQYKVRAYLQMRSLKACKREIKSVMNTSGNSIPSLFLKSNFEYLRGNYR
KAVKLLNSANITEHPGFIKTGECVRCMFWNNLGCIHHAMGKHHMAMFYFKRALQENDNTC
AQLLKQVGPSGKRLSGPPLCTLMADRRYELLYNCGILLLQTGRPLAAFDCLVEAVTAHHS
NPRLWLRLAECCIAVGKRNSEHEAKSLQNKKGIVHSMMGQGCHRKIILVSHSTQNSVCSP
DGQSAAIPVASVEFAGICLRNALLLLLPDEQREGRGTLAGDIGGVGAPEGGGSDSSEGAS
KSHEVELSRSAPPSSPLKRQEIENLRCSVLACSAYVALALGDNLIALKHAQKLLQQPKLS
GSLKFLGHLYAAEALISLDRISDAIAHLNPENVTDVSLGIPTTELEQGGDKGENEPMENN
GKLAPLCYPSSVSAARATMLFNLGSAYCLRSEYDKARRCLQQATLLIPPREVPPEAILLA
VYLELQNGNPQMALQIIKRNQLVPPAKVEARKKPQPVQGPLGAPGTPASTFPPTQRK
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgggaccgacctcgggacagcggtcgaaggggcgagaaatctgcggcgtggtt
ccctcaacactcgtggattcatccacttccggcaggggagtccagggcggaagcgactcg
atgaatcagctaggcggagatgcgaggtctgacgggaccagctgctcctctgggatcagc
agccaggagaaggatctggccaagaaggcgctcgacgccttcgaggttgggcagtacgac
agctgcctggcccagctctcctcgctcggcgaactgcggcgcgatgatcacaaagtgcag
cttaaccgctccgtggccgagttctaccgcagtggccagacagccaccgacgacctccgc
cacagccttgcgcaggttcgcatgcaggttcactcgacagcggaagagatggatgggctg
gaggacgtagagaatggcacgctgctctataaccaggccgtgctgctctgccatttcaag
cagtaccaccaggccattgctgtcgtggagcgcctctatcagttcattgagccattcgag
gagcgatttgcgcgcgcagtgagcttcctgctcatggacctttacctcgtgacacaccag
gcagagaaggccctgcctctgctcgccgtacttgagaagctcagctcgcagggcagtggc
gccaatgccaacggaaaggccggggaggtcgccaaggatgctgggagccagaaacccgac
acctcgtccaatgaacaaactcggtcaaaaatacatcagtacaaagtgagggcctatctc
caaatgaggtccctgaaagcctgcaagagggagataaagtctgtgatgaacacgtctggc
aactcgatcccttcgctcttcctgaagagcaactttgagtacctgagggggaactaccgc
aaagctgtgaaacttctgaatagcgccaacatcacagagcacccgggtttcatcaagacg
ggagaatgcgttcgctgcatgttttggaataacctgggctgcatccaccacgccatgggc
aagcaccacatggccatgttctacttcaagcgagcgctgcaggagaatgacaacacctgc
gcccagctactcaagcaagtgggcccctcaggcaagcgcctctctgggccgcccctctgc
accctgatggccgaccgacgctacgagctgctctacaactgcggcatcctcctgctgcag
acagggcggccactggcggccttcgactgcctggtggaggcggtgacggcacaccacagt
aacccacgcctctggttgcgtctcgccgagtgctgcattgctgttggcaagcggaattca
gagcacgaagccaagagtctgcagaacaaaaaaggcatcgtgcattccatgatggggcag
ggctgccatcgaaagatcatcctcgtgtctcattccacacagaactctgtgtgcagcccc
gatgggcagtcggcggcgatccccgtggccagcgtggagtttgctggaatctgtctccgg
aatgcgctgctgctgctgctgcccgacgagcagcgcgaggggaggggcacgctggcgggg
gatatcgggggggtgggagcccctgaaggaggaggcagcgacagcagtgaaggggcaagc
aagagccacgaggtggagctctcgcgctctgcacccccgtcgtctccgctcaagaggcaa
gaaatcgagaatttaaggtgctcggtgctggcttgcagcgcgtacgtggccctggcgctg
ggagacaatctcatcgccctcaagcacgcgcagaagttgctgcagcagcccaagctctcg
ggctcactcaagttccttggccacctgtatgcagccgaagccctcatttcgctggaccgc
atctcagacgccatcgcacacctcaaccctgagaacgtgacggacgtgtctctgggcatc
cccaccacggaactcgagcaaggtggcgacaagggagagaatgaacccatggaaaacaat
ggaaagctggcccccttgtgctaccccagctctgtgagtgccgcccgcgccaccatgctc
ttcaacctgggcagtgcgtactgcctgcgcagcgagtatgacaaggcgcgccgctgcctg
cagcaggcgacgttgctcattccgcccagggaggtgccacctgaagccatcctcctcgcc
gtctacctggagctgcagaatggtaacccacagatggccctacagatcatcaagaggaac
cagctggtgccccctgcaaaggtggaggcccgcaaaaaaccacagccggttcaagggcct
ctgggggcaccaggaactccagcatccacatttcctccaacccagcgcaaatga
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