Petromyzon marinus (sea lamprey): 116944416
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Entry
116944416 CDS
T09614
Name
(RefSeq) uncharacterized protein LOC116944416
KO
K16360
netrin-G3 ligand
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
116944416
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pmrn04515
]
116944416
Cell adhesion molecules [BR:
pmrn04515
]
Immunoglobulin superfamily
NGL family
116944416
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
ig
Ig_2
LRR_9
LRR_1
LRRNT
V-set
DUF7617
CLN3
Syndecan
Ctr
Motif
Other DBs
NCBI-GeneID:
116944416
NCBI-ProteinID:
XP_032813895
UniProt:
A0AAJ7T9U5
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All DBs
Position
21:complement(8632727..8656663)
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AA seq
1412 aa
AA seq
DB search
MMPRAAHSKRTSQTRDVSRRGISQARDASRRGSSLARDVTKRSSSHSCDVGERSIWRARD
VSRRRSLNRDVNGSSQSRDAGRGSSSPTRAVDGRNSKARDIISESSSRARDIVVGGRSLR
DRDVSGRSLWAHDVGGRRSLWARDVGAPSQRTPANPRRRVCPTGVPLTLPWSHLWWRRRR
WPLQQLRRLKARDWAHHLRQRYRPRLLSQRCRVQQADQPLQQQQHLHQHQRRLRRLKQRC
HQGQRLKASRQSRRPRGRVHGRRVSSQWVTPFKGQRRWQPEQTRQEQPPRARHHLEQEEH
IQLCHHRHHHHQPEGQQKQQHHHQQGDRDGCRGLSYPWAVRAEPGVTGPTAQRALPLLLT
HGASAPGDRRAARPRRSSSPPPSLSSSSTRPRWGVIIALIACIAMLPAMSAAQQEGFGVP
GGPGVGGATGVGSGQPMCPAMCSCSQQFSKVQCTRRSLREVPEGVSSNTRYLNLQENAIQ
VIRVDSFKHLRHLEILQLNKNQVRHIEVGAFNGLANLNTLELFDNRLTTIPIGAFEYLSK
LRELWLRNNPITSVPSLAFNRVPSLRRLDLSELRKLDFISEGAFEGLSNLRHLNLGMCML
REVPNLSSLGRLEELELSGNRLEQVKSGSFLGLSNLKKLWLMHSQVRLIERNAFDDLRSL
QELNLAHNSLTSLPHDLFTPLPSLQRVHLHHNPWNCDCDVLWLSWWLKENVPTNTTCCAR
CHSPPRLRTRYIGELDQSHFVCYAPVIVEAPLDQNVTEGSAAELKCRASSTTSVSWITPN
GTMMTHGSYRVRILVLNDGTLNFTNVTVQDTGLYTCLVSNSAGNTTASATLNVSSSSAQQ
AAGGPGGEGSSTSYFTTVTVETSETSNEEVGGGGGGDGGGGGGGGAGGGGGGGGPGGVGV
AQAGGDDGAGGGGGDGGGGGGVGGGGGGGGGSGGGGGSRSEGERVGTGGGVRFGAGVGVG
RSAPNGKLGPTPSSHWNNSLVVVTSSTPASARSRPVGVEFAGTRAPDRGYTVPISDGGGG
GGGGGGGDPSSTMAGLDEVMKTTKIIIGCFVAITLMAAVMLIVFYKMRKQHHHHHHQQQQ
QQHHHHHQHSQQQHHSLQQQQQQHHHHHHGLATHLHHHGGGGSGGGGGSGGPLHLGGGGG
GVGGLHLHHHLHHGGRHAPSRAIEVISVDDELVTGATLGEGLMIPPPPPAPPPPPPPPPP
PPQPPAPPAAASVPGAPVPAPSLPPILPTLQQQQQMQQQQQMQQQQMQQQQQMQQQQMQQ
QQQMQQQHHQQHQQQSPPPQHMQPDGDAERQLMLLKSNHHHQQLHHQQSLLDCENHNDGG
TAGLGGIVGGLGDGGGILDDPFSKMTQSLGMALQAIGGEHEGHLLAGMNNNTMVGVGVMA
PPQGPLGALHCSLHEPLLIRTNSKDNIQETQI
NT seq
4239 nt
NT seq
+upstream
nt +downstream
nt
atgatgcctcgggccgcacacagcaagaggacctcgcagactcgtgacgtcagcaggagg
ggcatctcgcaggctcgtgacgccagcaggagggggagctcgttggctcgtgacgtcacc
aaaaggagcagctcgcattcttgtgacgttggcgagaggagcatctggcgtgctcgtgac
gtcagcaggaggcgctcactgaatcgtgacgtcaacgggagctcgcagtctcgtgacgcc
ggcagggggagtagctcgccgacccgcgccgtcgacgggaggaattctaaagcccgtgac
atcatcagcgagagcagctcgcgggcccgtgacatcgtcgtcggcgggaggagtttgcgg
gaccgtgacgtcagtgggaggagtttgtgggcccatgacgtcggcgggaggaggagcttg
tgggcccgtgacgtcggcgcgccgtcgcagcgcacccccgccaatccccgtcgacgcgtc
tgcccgacgggggtgccgctcacgctgccttggtcccacctgtggtggcgacggcggcgg
tggccactgcagcagctgagacggttgaaggcccgggactgggcccatcacttgcggcag
cgctaccggcctcggctgctgagtcaacggtgtcgggtgcagcaggctgaccaaccactg
cagcagcagcagcatctgcaccaacatcagcgccgactgcgacggttgaaacaacgctgc
catcaggggcagcggttgaaagcttcgcggcaatccaggaggccacgtgggcgcgtacac
ggccgtcgggtgtcaagccaatgggtgactccatttaaaggacaacgccgttggcagcca
gagcagactcggcaagagcagcccccacgcgcgcgccatcatcttgagcaggaggagcat
attcagctttgtcatcatcggcatcatcatcatcagccggaagggcagcaaaagcagcag
catcatcatcagcagggggatcgtgacggctgccgtggcctatcatacccgtgggccgtc
agggctgaacccggagtcacgggccccacggcccagagggccctcccgcttctcctcaca
cacggggcctctgcccctggagacaggagggcagctcgcccacgacgatcatcatcacca
ccaccgtcattatcatcatcatccacacgtccaaggtggggggtcatcatcgccctcatt
gcctgcatcgcgatgctgcctgcaatgtcagcggctcagcaagaaggcttcggggtgcct
gggggaccaggggtcgggggcgcgacgggagtgggctccggccagccgatgtgcccggcc
atgtgctcgtgcagccagcagttcagcaaggtccagtgcacgcggaggtcactgcgggag
gtcccggagggggtgtccagcaacacgcgctacctgaacctgcaggagaacgcgatacag
gtgattcgagtggatagcttcaaacacctgagacacctggagatcctgcaactcaacaag
aaccaggttcgacacatagaggtgggcgcgttcaacgggctggccaacctcaacacgctg
gagctgttcgacaaccgcctcaccaccatccccatcggcgccttcgagtacctctccaag
ctgcgcgagctctggctgcgcaacaaccccatcaccagcgtgccctccctggccttcaac
cgcgtgccctcgctccgccgcctggacctcagcgagctgcgcaagctcgatttcatctcc
gagggcgcctttgagggtctgagcaacctgcgacacctgaacctgggcatgtgcatgctg
cgggaagtgcccaacctctcgtcgctggggcggctcgaagagctggaactgtccggcaac
cgccttgagcaggtcaagtcgggctccttcctgggcctctccaacctcaagaagctgtgg
ctcatgcattcgcaggtgcgcctgatcgagcgcaacgccttcgacgacctgcgctcgctg
caggagctcaacctggcgcacaacagcctcacgtcgctgccgcacgacctcttcacgccg
ctgccgtcgctgcagcgcgtccacctgcaccacaacccgtggaactgcgactgcgacgtc
ctctggctcagctggtggctcaaggagaacgtgcccaccaacacgacgtgctgcgcccgc
tgccactcgccgccgcgcctgcgcacgcgctacatcggcgagctcgaccagagccacttc
gtgtgctacgcgccggtcattgtcgaggcgcccctcgaccagaacgtgaccgagggcagc
gccgccgagctcaagtgccgcgcgtcctccacgacgtcggtcagctggatcacgcccaac
ggcaccatgatgacgcacggctcgtaccgggtgcgcatcctggtgctcaacgacggcacg
ctcaacttcaccaacgtcaccgtgcaggacacgggcctctacacgtgcctcgtgagcaac
tcggcgggaaacaccacggcgtcggccacgctcaacgtaagctcgtcgtcggcgcagcag
gcggccggcgggcccggcggcgagggctcgagcacgtcatacttcaccacggtgaccgtg
gagacgagcgaaacgagcaatgaggaggtcggaggaggaggaggaggcgacggtggagga
ggtggtggcggaggtgcaggtggtggtggtggtggtggtggaccgggcggcgtaggagtg
gcacaggcgggtggtgatgacggcgccggtggtggtggcggcgacggtggcggtggtgga
ggtgtcggaggcggcgggggcggtggtggtggtagcggcggcggcggcggctcccgttcg
gaaggagagagagtcggcaccggcggtggcgttcggttcggggcgggcgtcggcgtaggc
cggagcgcgcccaacggcaagctgggccccaccccgtcgagccactggaacaacagcctg
gtggtggtcacctcctccacgccggcgtcggccaggagccgccccgtgggcgtcgaattt
gccggcacgcgggcgcccgaccggggctacacggtgcccatctccgacggcggcggcggc
ggcggaggcggcgggggcggagacccctcgtcgaccatggccgggctcgacgaggtgatg
aagacgaccaagatcatcatcggctgcttcgtggccatcacgctcatggcggcggtgatg
ctcatcgtgttctacaagatgcgcaagcagcaccatcaccaccaccaccagcagcagcag
cagcagcaccatcaccaccaccagcacagccagcagcagcaccactcgctgcagcagcag
cagcagcagcaccaccaccaccaccacggcctggccacacacctccaccaccacggcggc
ggtggctcgggcggaggcggtggctccggtgggcccctgcacctgggtggaggagggggc
ggcgtcggcggcctccacctgcaccaccacctgcaccacggcgggcggcacgcgccgtcg
cgcgccatcgaggtgatcagcgtggacgatgagctggtgacgggcgccaccctgggcgag
ggcctcatgatccctcctcctcctcccgcgcctcctccgccgcctccgccccctcctcct
cctcctcagccgccggcgcctcctgccgccgcgtccgttcccggagcgccggtgcccgcc
ccgtcattaccgccgatccttcccactcttcagcagcagcagcagatgcagcagcagcag
cagatgcagcagcagcagatgcagcagcagcagcagatgcagcagcagcagatgcagcag
cagcagcagatgcagcagcagcatcatcagcagcatcagcagcagagtcctcctccgcag
cacatgcagcccgatggtgatgccgagcgccagctcatgttgctcaagagcaaccaccac
caccagcagctgcaccaccagcagagtctgctcgattgtgaaaaccacaacgacggtggt
accgctgggctcggaggaatcgtcggcggactcggggatggcggaggcatcctggacgac
cccttctccaagatgacgcagagcctcggcatggccctgcaggccataggcggagagcac
gagggccacctcctggcggggatgaacaacaacaccatggtcggggtcggggtcatggcc
ccaccgcaggggcccctgggcgcgctgcactgctcgctgcacgagccgctcctcatccgc
accaattccaaggacaacattcaggagacgcagatatag
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