Petromyzon marinus (sea lamprey): 116944595
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Entry
116944595 CDS
T09614
Symbol
RFC4
Name
(RefSeq) replication factor C subunit 4 isoform X1
KO
K10755
replication factor C subunit 2/4
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn03030
DNA replication
pmrn03410
Base excision repair
pmrn03420
Nucleotide excision repair
pmrn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
116944595 (RFC4)
03410 Base excision repair
116944595 (RFC4)
03420 Nucleotide excision repair
116944595 (RFC4)
03430 Mismatch repair
116944595 (RFC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmrn03032
]
116944595 (RFC4)
03036 Chromosome and associated proteins [BR:
pmrn03036
]
116944595 (RFC4)
03400 DNA repair and recombination proteins [BR:
pmrn03400
]
116944595 (RFC4)
DNA replication proteins [BR:
pmrn03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
116944595 (RFC4)
DNA Replication Termination Factors
ELG1-RFC complex
116944595 (RFC4)
Chromosome and associated proteins [BR:
pmrn03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
116944595 (RFC4)
DNA repair and recombination proteins [BR:
pmrn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
116944595 (RFC4)
Check point factors
HRAD17(Rad24)-RFC complex
116944595 (RFC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
RCF1-5-like_lid
DNA_pol3_delta2
AAA_16
Rad17
AAA_assoc_2
DNAX_ATPase_lid
AAA_30
Mg_chelatase
AAA_22
AAA_11
Gp44_lid
SLFN-g3_helicase
AAA_24
DUF815
RuvB_N
AAA_5
UBA_At5g58720
ResIII
Motif
Other DBs
NCBI-GeneID:
116944595
NCBI-ProteinID:
XP_032814190
UniProt:
A0AAJ7WY11
LinkDB
All DBs
Position
21:2067661..2078222
Genome browser
AA seq
383 aa
AA seq
DB search
MRWGGLFFFLRGFPITILLSQRKMHAFLKGGSLPQKEKSAAKEKPGSCEAKRSRAVPWVE
KYRPRCVDEVAHQEEVVAVLKKSLQGADLPNLLFYGPPGTGKTSAILAAARDLFGPELYA
QRVLELNASDERGIQVVRHKVKNFAQLTASSTRKDGSPCPPFKIVVLDEADSMTSAAQAA
LRRTMERETKTTRFCLICNYVSRIIEPLTSRCSKFRFKPLSDAAQEQRVRHVCDQEGLKI
EQEALTELVKVAEGDLRRAITMLQSAARLVVGATITRAIIMEISASVPTAMLNALVEACR
SSSIDKMDLAVQNICCEGYAATTLIGQLHEVVLCRADLSDRQKSAIADKLGEVDKCLVDG
ADEYLQMLALCSVLMTQFNRPAE
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgcggtggggggggttattttttttcctgcgtggctttcccataacgattttgttgtcg
caaaggaagatgcacgcgttcctcaagggcgggagtttacctcagaaggagaagtcggcc
gccaaggagaagcccggcagctgcgaggcgaagcggagccgagcggtgccatgggtggag
aaataccggcccaggtgtgtggatgaagttgcgcaccaagaagaggtggtggccgtgctc
aagaagtcattgcaaggagccgatctgcccaacctgctgttctacggaccgccgggtacg
gggaaaacgtcggcgatcctggcagcggcacgcgatttgtttgggccggagctgtatgcg
cagcgcgtgttggagctcaacgcgtcggacgagcgcggcatccaggtggtgcgacataaa
gtgaagaatttcgcgcagctcacagcatccagcactcgcaaagatggcagcccctgcccg
ccgtttaagattgtggtgctggacgaagcggactcgatgacatccgcggcccaggcggcg
ctgcgccgcacgatggaacgcgagacgaagacgacgcgattctgcctcatctgcaactac
gtgagccgcatcattgagccactcacttcgcgctgctccaagttccgcttcaagcccctg
tcggacgctgcgcaggagcagagggtcaggcacgtgtgtgaccaggaagggctcaagatc
gagcaggaggccctgacggagctggtaaaggtggccgaaggcgaccttcgccgcgccatc
accatgctgcagagcgccgcccgcctcgttgtcggggcgaccatcacgcgagccatcatc
atggagatctccgcctccgtgcccaccgccatgctaaacgccctggtggaagcgtgccgc
tccagttccatcgacaagatggacctggctgtccagaacatttgctgcgagggctacgcg
gccacgacgctcatagggcagcttcacgaggtcgtgctgtgtcgtgccgacctctccgac
cggcagaagtcggccatcgccgacaagctgggggaggtggacaagtgcctggtggacgga
gcggatgaatatctgcagatgctggccctgtgctccgtccttatgacgcagttcaatcgc
cccgcggagtga
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