Petromyzon marinus (sea lamprey): 116944599
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Entry
116944599 CDS
T09614
Name
(RefSeq) serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit alpha-like isoform X1
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn03015
mRNA surveillance pathway
pmrn04261
Adrenergic signaling in cardiomyocytes
pmrn04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
116944599
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
116944599
09158 Development and regeneration
04382 Cornified envelope formation
116944599
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pmrn01009
]
116944599
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmrn03019
]
116944599
03036 Chromosome and associated proteins [BR:
pmrn03036
]
116944599
Protein phosphatases and associated proteins [BR:
pmrn01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
116944599
Messenger RNA biogenesis [BR:
pmrn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
116944599
Chromosome and associated proteins [BR:
pmrn03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
116944599
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
P2R3B_EF-hand
EF-hand_7
EF-hand_5
EF-hand_6
EF-hand_1
EF-hand_8
Motif
Other DBs
NCBI-GeneID:
116944599
NCBI-ProteinID:
XP_032814195
UniProt:
A0AAJ7TAE2
LinkDB
All DBs
Position
21:complement(2097480..2142881)
Genome browser
AA seq
1344 aa
AA seq
DB search
MEDWRQQQLLLSQSLSTSSSLSSLSSLSLSSSSSSSLRPGPPAAYKLVATSVTHFGSARA
EACLPSITTPLSRAVHHCVATDNAAKTASTAKTTGEWDGRHGCSPKTTEAQRAGILNATS
QGGHFQDVGETGGAFPVLAPHCDELQNGCFREGVTPGWCGVASCRVVHRGTCSPATPRIV
HSSSVKATAFATGGGRFSNDDGLTNLFIGSSGDSSDCGSPAPKNNVVFARKSLARPNVAV
GTIELASGKIKEFSRQTQQAQVNAARRSPRRNKGASDAKAPVKVKHASRMKPISDPETSL
CLARPSGRAGPDAAFDLLLPYLRQGLLVRLLEEAGASTGEGNTGSVEQFLSSLFASTTSA
PSTAAFSSTEDIRACLQILVKCSEDLKRCTNIIKQCVDEKSQRDGKAVRAGCGSSAPDLH
RTLPDTAGPEFLAAFLGGAVAAAAAAGFGSIAPPSYEDVVSSSSHPGCPATPLPPNEMPL
RRSLVLKSSSSSHPTSKFTGRKPSNKTSSLFSSSPSPNSVAIVPPSQGTGADLLLLPTQA
ASEDCAFRSVDGGVADSGKLPHMLINSTNMAADFPQLLPAVEGEASIGKKREYDVDQILV
ELESISKEFSSPSPVKSNAKLDPAKGAKVNDRNDNDEDEDKLLGKVLAVMEGLATDLAQC
GATGTGARLSGEAQVRAKQDLMGLLMERLTTALQGPESGSTALAVSQERHAHQAAGADVA
EATTHLAQDTREESKPKPVLHNHLPHAPDPDPHPPSSRIHSLSSFKSSGESVPHSPVSST
RKSPAPALRGWNSRGPMPQSVLISEPTPPPPPPPSLPSAVVQNSPDPDLQIPIAFAQVPE
PASPGREGVEEQGGAAGAVVVISSTVPPAPDSNTLRPGYETRNVESGVLLHDGESAVGFH
ASLLSSDDDVGKGERFGKGGGGGASSDEDLSGVMIALKEVFGALPDGRAYLDNMTDVTKA
CRCCPYWRVALFLAAHGEETGFVTMETFTLTWLRVTRASEDDAARFVSLLARPGVAGLTQ
EDFIPLVQDIVDTHPGLAFLKDAPEFHSRYITTVIQRIFYTVNRSWSGRITVNELRRSNF
LQTLALVAEEDDINQVTEYFSYEHFYVIYCKFWELDTDHDLYISASDLARHSDGAISSCM
IHRIFSGAVTRGSMAQQAGRMSYADFVWFLLSEEDKRTPTSIEYWFRCLDLDGDGVLSLY
ELEHFYSEQAQRMEVLGIEPLPFCDCVCQMLDLVKPVRPACVTLGDLKRCKMSHIFLDTF
FNLEKYLDREQREPFAITRDLDGDAPELSDWERYAMEEYEMLVAKESEADQLTKGTSDED
IDDEDDILAAAELAGEINALTAQS
NT seq
4035 nt
NT seq
+upstream
nt +downstream
nt
atggaagactggcggcaacagcagctgctgctctctcagtcactctccacctcgtcatcc
ctctcatctctgtcatccctgtcattgtcgtcatcttcgtcgtcgtcccttcgccccggc
cctccggccgcctataaactcgtggcgacgagcgtgacccatttcgggagcgctcgcgcc
gaggcctgcctgcccagcatcaccacgccactgagccgtgccgtgcaccattgcgtggcc
accgacaacgccgccaaaaccgccagcaccgcaaaaaccaccggcgagtgggacggcagg
catggatgcagtcccaaaaccactgaggctcagagggccggcatcctcaatgccaccagt
caaggtggccactttcaagacgttggtgaaactggaggtgcttttccagttttggcaccc
cactgtgatgagctacaaaatggctgctttcgagagggtgtcacgccgggctggtgcggc
gtggcttcgtgccgggtggtacaccgcggcacgtgttcccctgcaaccccacgaatcgtg
catagctcatccgtgaaggcgactgccttcgccacgggtgggggtcgattctcgaacgac
gatggtctaactaatttattcatcggcagcagtggtgactcctccgattgcggttccccg
gctcccaagaataacgtggtctttgcccggaagagcctcgccaggcctaacgttgctgtg
ggaacaatagaactggcgagcggcaaaatcaaagagttttcccgacaaacgcagcaagcg
caggtgaacgcggcgcgcaggagcccccgccggaataaaggagcctccgacgccaaggcc
cctgtgaaagtgaaacacgcgtcgaggatgaaaccaatctcagatccagagacatcactg
tgcttggcccgaccgagcggcagggcaggtcctgatgcggccttcgacctgctcttgccg
tatctgcgccagggcctcctcgtcaggctcctggaggaagccggcgcctccacgggcgaa
ggtaacaccgggagtgtcgagcagtttctgtcgtcgttgttcgcatcgacaacatcggcg
ccttcgacggccgcgttctcgtccacagaggacatccgagcctgcctgcagatcctggtg
aagtgctcggaagacctgaaacggtgcaccaacattatcaagcagtgtgtcgacgagaag
tctcagcgcgatggcaaggcggtgcgtgccggctgcgggtcgtctgctcctgacctccac
cggaccctgcccgacacggccgggcctgaatttctcgcggcattccttggcggtgccgtc
gccgcggcagccgcagcgggatttggttctattgcccccccgtcctacgaagatgttgtc
tcctcctcgtcccacccaggctgccctgctacacctctgccaccaaacgaaatgccatta
cgacggtcgctggtgttgaaatcgtcatcatcttcgcatccgacatcaaaattcacagga
aggaaaccgtcgaacaaaacatcatctttgttctcatcgtctcctagtccgaattctgtg
gcaattgttccaccatcgcagggtacaggtgctgacttgctgttgctaccaacgcaggcg
gccagtgaggattgtgctttcagaagtgttgatggtggtgtcgcagacagcgggaagctg
cctcacatgttgataaactccaccaacatggcggctgattttccacagctccttccggcc
gtggaaggtgaagcaagtatcgggaaaaagcgtgaatatgatgtggatcagattctggtg
gagttggagagcatttccaaggagttttcgtcaccatctcctgtgaagtcaaatgctaaa
ttggatccggcaaaaggcgcgaaggtaaacgaccggaacgataatgacgaggatgaagat
aaactgctggggaaagtgctggcagtgatggagggcctggccacggacctggcgcagtgc
ggcgccaccggcacgggcgcccgtctgtcgggtgaggcacaggtgcgggcgaagcaggac
ctcatggggcttctcatggagcgacttacgacggcgctgcagggtcctgagtcaggctcc
acggccctggcagtttctcaggagcggcacgcccaccaggcggctggcgcagatgtggcg
gaggcgacgacgcatttggcgcaggacacacgagaggagtcaaaacccaaaccggtcctg
cacaatcacctcccgcatgctccggatcctgacccacaccctccgagctcccggattcac
agcctcagctctttcaaaagctctggggaatccgttcctcactctccagtctcctcgacg
cgcaagtccccagctccagcgctgcgaggatggaactcgcgagggccgatgccacagagc
gtactcatctccgaacccacgccacctccgccaccgccaccatcactaccatctgcagtg
gttcaaaacagtccggatccagatttgcaaattccgatcgcctttgcacaagtccccgag
ccggcgagtccaggccgggagggagtggaggagcagggaggtgctgccggtgccgttgtt
gtgatctcatccactgtgcccccggcaccggattcaaacactctccgtcccggttacgaa
acccggaatgtggaatctggagttttgcttcatgatggggagtccgctgtgggttttcat
gcgagcttgctgtcaagtgacgatgatgtcggcaaaggcgaaagatttggaaaaggaggt
ggcggtggagctagcagtgatgaggatctgagtggggtgatgattgctttgaaggaggtc
ttcggagctctgcctgatgggagagcctatctggataacatgacggatgtcacaaaggcg
tgcaggtgctgcccctactggagagttgccctctttctcgccgcccatggggaggagact
ggattcgttaccatggaaaccttcaccctgacctggttacgggtgacgagagcgagtgag
gatgacgcggcgaggttcgtgtcgctcctggctcggcccggggtggctggactcacccag
gaagacttcatcccccttgtgcaggacattgtggacactcatccagggctggcgtttcta
aaagacgctccggagtttcactcgcgttatataactacggttatccaaagaatattttac
acagtcaaccgatcgtggagtggacgaattacagttaacgagctcaggagaagtaacttc
cttcaaacgctggcgctggtggcggaagaagacgacatcaaccaggttacagaatacttt
tcttatgagcatttctacgtcatctactgcaagttctgggagctggacaccgaccacgac
ctctacatcagtgccagcgacctggcacggcatagcgacggagctatttccagttgcatg
attcacaggatcttctctggggctgttacacgtggctccatggcgcagcaggccggacgc
atgagctatgctgatttcgtgtggttcctgttgtcggaggaggacaaacggacacccacc
agcatcgagtactggtttcggtgcctggacttggatggggacggcgtgctgtctctctac
gagctcgagcacttctacagtgagcaggcgcagcgcatggaggtcctgggcatcgagccg
ctgcccttctgcgactgcgtctgccagatgctcgacctcgtcaagcctgttcggccagcg
tgcgtgacgttgggagacctcaaacgttgtaaaatgtcacacattttcctggacacattc
ttcaacctggagaaatacctcgaccgcgagcagagagagccgttcgccatcacccgggat
ttggatggagacgcacccgaactgtccgactgggagcgttacgccatggaggagtacgag
atgctggttgccaaagagtccgaggcggatcagctcaccaaggggacgtccgacgaagac
attgatgatgaagacgacatcctggcggccgcggaactcgccggcgaaattaacgctctc
accgcacagagctga
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integrated database retrieval system
