Petromyzon marinus (sea lamprey): 116944600
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Entry
116944600 CDS
T09614
Name
(RefSeq) cohesin subunit SA-1-like
KO
K06671
cohesin complex subunit SA-1/2
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
116944600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmrn03036
]
116944600
Chromosome and associated proteins [BR:
pmrn03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
116944600
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
SCD
STAG
Cnd1
INTS7_N
Motif
Other DBs
NCBI-GeneID:
116944600
NCBI-ProteinID:
XP_032814198
UniProt:
A0AAJ7TC77
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All DBs
Position
21:2151028..2197850
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AA seq
1195 aa
AA seq
DB search
MMTRLPTRPAPRRMSACRTRSLSCVTGSNGRNVLREGGGALPAAKKPRATLPRQAKRPRA
PKKPAQPAAAAKPRGAAAVVTSTPPDPNSLYHAVRIGKAVMLTVVDTWVDSYKEDQDEAT
LSLINFFIQSSGCKGCVTMDMYRTMEYADIIRKMTEGFDEESAEYPLSQAGLQAKRFRTV
LADFVLMLVRQSRNGPLYDLKEMLLGLLTGLTDSQVRAFRHTATFAALKLQTGLVEVSLS
LIGSLENASRQLQAERSKEPRLRAVDKIEGLLNTIKQLNEHQEDVENMMRSIFKSVFVHR
YRDSFPEIRALCMEEIGVWMKAYSDVFLDDGYLKYIGWTLNDKQGEVRLRCLSALQGLYS
EKEFFLKLELFTKRFKERIVSMVNDKELDVAVKATQVLVSILENNEESLSVEDCKNVYSM
VFSMHRQLATAAGEFLYKKLHSYISNSYDDEEDMGSHSRRRTEKNTTLLRLLVSFLLESE
MHQHAAYMVDSLWEHAREELHDWEAMTSLLLPTHNANSPNEGLSDKEEAGLIDIMVCCVK
QAAEGLPPIGRLSSRKTQSAKEKKNKQDEQMRLTQHFIIAMPQLLAKYAVDEENVVNLLQ
VPMYFALEVYTNGRLEKHLDTLVRQVGEVVQKHVLPDVLDGCSRALVALTIPDSSVHSRA
LVSVSSLMDLLVDRFAHALPAFMEQDYDADGSIAYDLLSVLKRLASFYNGHDLTRLDVHE
GCLTLIKHADKGGDVPDQILIYATKCVHYSLFWRLSALAEDQPDKKEVVSLRKSLRSFLH
LCNKLLIGIGLALKEQVFLLLCDTLLVFGHSVAEQGRHALLPLVVQAEPELQAEMGSFII
EQIFSTNEDIFDQQEDMQNIEVLHKRRCLLAAYCKLLVYGAIDMRAGVDIFRRYVEFYIN
YGDIIKETLSRLRQIDLMEYAQTLALTLKQMFTVMLEETSNLVPVKELARRFSLTFGMDA
VRSRHAIAALHKNGIDFAFEAKKPGTAPPNILFLEVLCEFSPKLLSQDKKTLCGYMESYK
PPTRRNVLDSEWQPVFTYRNSLIASAQPDGAVGTPATDASAGRRIRTRHGSANISMSTEA
SGLEWGARTPIATPATPQLTSTVLRGGEGVAMATARRGNVSSRGSLSAGSMGNVYTRSRG
HSLISAVTKEVSDEDDEDNTKADKLSSGFTSRGSQLLNGPEDAMDTDVDFSTPFF
NT seq
3588 nt
NT seq
+upstream
nt +downstream
nt
atgatgacacgtcttccaactcgtccagcacccaggagaatgagtgcttgtcggacgagg
agtttgtcgtgcgtgactggaagcaacggacgaaacgtcctgcgcgagggggggggggcc
ctaccggcggcgaaaaagcctcgtgcaaccctgccaaggcaggcgaagcgtccccgtgcc
cccaagaagccagcacagccggctgctgccgcgaagcctaggggagcagcagcggtggtg
acatcgactccaccggatcccaattctctgtaccatgctgtccgcattggcaaagccgtg
atgctgaccgttgtggacacatgggtcgacagctacaaggaagaccaggatgaagccaca
ctgagtctaatcaacttcttcatccagagctctggctgcaaaggctgcgtcacaatggac
atgtatcgcacaatggagtatgcggacatcatccgcaagatgacggagggattcgacgag
gagagtgcggagtacccactctcacaagccgggctgcaggcgaagcgtttccgcacagtg
ctggccgattttgtgctcatgctggtgcggcagagccgcaatggcccactgtatgacctc
aaggagatgctgcttgggttgctcaccgggctcaccgactcccaggtccgcgccttccgg
cacaccgccaccttcgccgccctgaagctgcaaacggggcttgtggaggtgtccttgtct
ctaattgggagcttggagaacgcctcgcgacagctgcaggccgagcgcagcaaggagccc
aggctcagggccgtggacaagatcgaggggctgctcaacaccatcaagcagttgaatgaa
catcaggaggatgtggagaatatgatgcgttctattttcaagtctgtctttgtacatcgc
taccgggattcgttcccagagatccgagccctgtgcatggaggagattggagtgtggatg
aaggcctacagtgacgtattcctcgatgatggttacctcaagtacattggctggactctc
aacgacaagcaaggagaggtgaggttgcgatgcctctccgctctccagggcctctactcg
gagaaggaattcttcctgaagctggaactcttcacaaaacgcttcaaggagcggattgtt
tcaatggtgaatgacaaggagttggatgtggctgtcaaggccacacaagtcctcgtcagc
attctcgagaacaatgaagaatcgctgtcagtggaggactgtaagaatgtctacagcatg
gtgttctctatgcaccgacaactggccacagctgccggcgagttcctctacaagaagttg
cattcttacatcagcaatagctatgacgatgaggaggacatgggctcccacagccggagg
aggacggagaagaacacgactcttctgcgcttgctcgtttccttcttgcttgagagtgaa
atgcaccagcacgcggcgtacatggtggacagcctgtgggagcacgcacgggaggagctg
catgactgggaggccatgacgagcctcctactgcccacgcataatgccaacagccccaac
gagggcctctcggacaaagaggaggcgggcctcatcgacatcatggtttgctgtgtgaag
caggctgctgagggcctcccgcccattggccgcctctccagtcgcaagactcagtcggcc
aaagagaaaaagaacaaacaagacgagcagatgcggctcacgcagcatttcatcatcgcc
atgccacagcttcttgccaagtatgcggtggatgaagagaatgtggtgaatttgctccaa
gtgccgatgtacttcgcccttgaggtctacaccaatgggagactggaaaagcacctggac
acgctggtgcgccaggtgggcgaggtggtgcagaagcacgtcttgccggacgtgctggat
gggtgctcgcgcgcactggtcgcactgaccatccccgactcctccgtgcactcgcgcgcc
ctcgtgtccgtgtcgagcctgatggacctcctcgttgaccgctttgctcatgccctgccc
gcattcatggagcaggattatgacgcggatggcagcatcgcctacgacttgctgtccgtg
ctgaagagactggcctcattctacaatggtcacgacctgaccaggctggacgtacacgag
ggctgtctgactctcataaagcatgcggacaagggaggggatgtccccgatcagatttta
atctacgccactaagtgcgtgcattacagcctgttttggagattgtccgctcttgcagaa
gaccaaccagataagaaggaggttgtctccctgcgcaagagcctgaggtcgtttttgcat
ttgtgcaacaagttgctcatcggaatcggtctggctttgaaagagcaggtgttccttctg
ctgtgcgacacactgctcgtgtttggccactcagtggcagagcagggccgccatgctctg
ctccccctcgtcgtccaggccgagcctgagctgcaggccgagatgggcagcttcatcatc
gagcaaatcttctccaccaacgaggacatttttgatcagcaagaggacatgcagaatatt
gaggtgcttcacaagcggaggtgcctcctcgccgcttactgcaagctgctggtgtatgga
gccatagacatgcgcgccggcgttgacatcttccgccgatacgtggagttctacatcaac
tatggggacatcatcaaggagacgctgagtcgcttgaggcagatcgacctgatggagtat
gcccaaacgctcgccctcacgctcaagcagatgttcacggtgatgctggaggagacgtca
aacctggttcctgtcaaggagctggcgcgtcgtttctcgctgacgtttgggatggacgct
gttcgctcgcggcacgcgatagctgccctgcacaagaacggcatcgactttgcatttgaa
gcgaagaagccgggcactgccccgccgaacatcctcttcctggaggtgctgtgcgaattc
tctccaaaactcctctctcaggacaagaaaacactctgcgggtacatggagagctacaag
ccgcccacgcgtaggaacgtgttggactcggagtggcagcctgtgttcacctaccgcaac
tccctgatcgcctccgctcagccagatggtgccgttggcaccccggcgactgatgccagc
gccggacgcaggattcgcacacgacacggcagtgccaacatctccatgtctacggaggcc
tcaggcctcgagtggggtgcccgcacccccatcgcgaccccggcgacaccgcagctcacc
tccacggtgctgagggggggagagggggtcgccatggcgaccgcgcggcgtggcaatgtg
agcagcagaggctccttgtcggccggatccatgggaaatgtctacactcgctcaaggggc
cacagtttgatatctgcggtaactaaggaggtttccgatgaggatgacgaggacaacacg
aaagctgataaactcagcagcgggtttacatcacgcggaagtcaacttctgaacggccca
gaggacgctatggacacagacgtggatttcagcacccccttcttctga
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