Petromyzon marinus (sea lamprey): 116944626
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Entry
116944626 CDS
T09614
Symbol
CTR9
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog isoform X1
KO
K15176
RNA polymerase-associated protein CTR9
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmrn03021
]
116944626 (CTR9)
Transcription machinery [BR:
pmrn03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
116944626 (CTR9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_14
TPR_19
TPR_8
TPR_16
TPR_12
TPR_CcmH_CycH
TPR_17
TPR_10
TPR_7
TPR_6
ARM_TT21_5th
TPR_11
TPR_Slam
TPR_9
ARM_TT21_4th
ARM_TT21_C
TPR_BSK1_C
ANAPC3
Motif
Other DBs
NCBI-GeneID:
116944626
NCBI-ProteinID:
XP_032814246
UniProt:
A0AAJ7TCA7
LinkDB
All DBs
Position
21:4710379..4736496
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AA seq
1174 aa
AA seq
DB search
MSRGSIEIPLRDTDEVIELDFDQLPEGDEVISILKQEHTQLHIWIALALEYYRQGKPEDF
VKLLEAARVDGTLDYRDHEKDQMTCLDTLAAYYVQQARREKNKDVKKELLTQATLLYTMA
DKIIMYDQNHLLGRACYCLLEGEKMEQADAQFHFVLNQSPSNIPALLGKACIAFNKKDFR
GALAYYKKALRTNPNCPAEVRLGMGHCFVKLSKPEKAQLAFMRALELNPKCVGALVGLAI
LELNKKEADSIKNGVQLLSKAYTIDSSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNTD
VEAMQAESCYQLARSFHVQGDYDQAFQYYYQATQFASPNFLLPYFGLGQMYIYRGDRDNA
AGCFEKVLKAYPNNYETMKILGSLYATSNDQEKRETAKGHLKKVTEQYPDDVEAWIELAQ
ILEQSDIQGALSAYGTATRILQEKVQADVPPEILNNVAALHFRLGNLGEAKKYYAASLDR
AKAEAQHDEHYYNAISVTSTYNLARLHESTCNYHGAEQHYKNILREHPNYVDCYLRLGCM
ARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWQPGQKKFERILKQPATQND
AYSMLALGNVWLQTLHQPTRDKEKEKRHQDRALAIYKQVLRNDPKNLYAANGIGAVLAHK
GCIREARDVFAQVREATADVCDVWLNLAHIYVEQKQFISAVQMYENCLKKFFKCQNTEVL
LFLARAYFKCGKLAECKQTLLKARHVAPSDSVLMFNVALVLQRLATSVLRDEKSNLKAVL
SAVKELELAQRYFSYLSKSGDRMKFDLAQAAAEARQCADLLSQAQYHVSRARKLDEEERS
QRAKQEKEKEELKLKLMQEQEEKRRRLSEEQRKLLETRAQFVEKTKGLLVFSERPESQRE
KRKGGGGSGKRRKGADYEDFVNDGSEDDLPTARKKKQRRASSSEGEGGDGTDGERRRKRG
GRKARSRHQSGGQDDGAPRSKKPRKQPQKKERQRKEEAKGERLSAAMMKKVKSKAIISSS
DDSSDDDALKIADEGGKASGSASDSDGDEAPKQQRQRLVSDSESDGGGGQSPRAPSDAGS
RRSRSAHSSSEDEGGRAGRDDDDDDDGGRRGGGNSDEDEEDAVGGAPAGRRRRGNVDDDE
EEEAAVSGSERDGSGSPPASVRSASPVDSADDSQ
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgcggctccatcgagatcccgctcagggacacggacgaggtgatagagctcgac
tttgatcagctgccggagggtgacgaagtcatcagcattctcaagcaggagcacacgcag
ctgcacatatggatcgcgctcgctttggagtactaccggcagggcaagccggaggacttt
gtgaaactgctggaggcggcgcgcgtggacggtacgctggactaccgcgaccacgagaag
gaccagatgacgtgcctcgacacgctggccgcctactacgtgcagcaggcgcggcgcgag
aaaaacaaggatgtcaagaaggagctgctcacccaggccacgctcctctacaccatggcc
gataagatcatcatgtacgaccagaaccatttgctcggccgagcctgctactgcctcctc
gagggagagaagatggagcaggcggacgcacagttccactttgtgctcaaccagtcgccc
agcaacatccccgcgctgctcggcaaagcgtgcatcgcgttcaacaagaaggatttccgc
ggggcactcgcctactacaagaaggcgttacgcactaaccccaactgcccagcggaggtt
cgtctgggcatgggccactgcttcgtgaagctgagcaagccggagaaggcgcagctcgcg
ttcatgcgcgcgctggagctcaaccccaagtgcgtgggcgccctcgtcggcctcgccatc
ctcgagctcaacaagaaggaggctgactccatcaagaacggcgtgcagctgttgtccaag
gcctacaccattgatagcagcaaccccatggtcctcaaccacctggccaatcacttcttc
ttcaagaaggattacagcaaagtgcagcacctggcactgcacgcgttccacaacacggac
gtggaggcgatgcaggccgagagctgctaccaactggcgcgctcgttccacgtgcagggg
gactacgaccaggccttccagtactactaccaggcgacccagttcgcctcgcccaacttc
ctgctgccctacttcggcctgggccagatgtacatctaccgcggcgaccgggacaacgcg
gccggctgcttcgagaaggtgctcaaggcctaccccaacaactacgagaccatgaagatc
ctgggctcgctctacgccaccagcaacgaccaggagaagagagagaccgccaagggtcac
ctcaagaaggtcacggagcagtaccccgatgatgtggaagcctggattgaattggctcag
atccttgagcaatccgacatacagggcgccctgtcggcttacggcacagcaacacgcatc
ctgcaggagaaggtgcaggccgacgttccccccgagatcctcaacaacgtcgccgcgctg
cacttccgcctgggaaacctcggggaggctaagaagtactacgcggcgtcgctggacagg
gcgaaggccgaggctcagcatgacgagcactactacaacgccatttcggtgacgagcacg
tacaacctggcgcgcctgcacgagtccacgtgcaactaccacggcgcggagcagcactac
aagaacatcctacgcgagcatcccaactacgtcgactgctacctgcgtctcggctgcatg
gcgagagacaaggggaacttctacgaggcctccgactggtttaaggaggccctgcagatc
aaccaggaccacccagacgcctggtccctcatcgggaacctgcatctcgccaagcaggag
tggcagccggggcagaaaaagtttgagcgaatcctgaagcagccggcgacgcagaacgac
gcctactcgatgctggcgttgggcaacgtgtggctgcagacgctgcaccagcccacacgg
gacaaggagaaggaaaaacgtcatcaggatcgtgctttggccatctacaaacaggttctg
aggaacgaccccaaaaacctgtacgcggctaatggaatcggcgccgtgctggcccacaag
ggctgcatccgcgaggctcgggacgtgttcgcccaggtgcgcgaggccacggcggacgtg
tgcgatgtgtggctcaacctggcgcacatctacgtggagcagaagcagttcatcagcgcc
gtgcaaatgtacgagaactgcctcaagaagttcttcaagtgtcagaacacggaggtcctc
ctgttcctggcgcgggcgtacttcaagtgcggcaagctcgccgagtgcaagcaaaccctt
ctgaaggcgcggcacgtggcgcccagcgacagcgtgctaatgtttaacgtggcgctggtg
ctgcagcgtctcgccacgtcggtgctgcgtgacgagaagagcaacctcaaggccgtactg
agcgccgtcaaggagctcgagctggcgcagaggtacttcagctacctgagcaagtctggc
gaccgcatgaagttcgacttggcccaggcggcagctgaagccaggcagtgcgccgacctg
ctgagccaagcgcagtaccacgtgtctcgagcgaggaagctggatgaggaggaacgctct
cagcgcgccaagcaggagaaggagaaagaggagctcaagctgaagctcatgcaggagcag
gaagaaaagcggcgccggctctcggaggagcagcgcaagctcctggagacgcgagcgcag
tttgtggagaagaccaagggcctgctggtgttcagcgagcgccccgagtcccagcgcgag
aaacgcaagggcggagggggcagcggcaagaggcgcaagggcgccgactacgaagacttt
gtgaacgacggctcggaggacgacctgccgacggcgcgcaagaagaagcagcggcgagcg
agcagtagcgagggggagggcggtgacggcaccgacggagagaggaggcgcaagcgaggt
ggtcgtaaggccaggagccgccaccagagtgggggccaggatgatggggctccccgttcc
aagaaacctcgcaagcagccgcagaagaaggagcggcagcgcaaagaggaggcgaagggc
gagcgcttgtcggccgccatgatgaagaaggtgaagtcgaaggccatcatctcgtcgagc
gacgactcctcggacgacgacgccctcaagatcgccgacgaggggggcaaggcgagcggc
tccgcctcggactccgacggggatgaggcgcccaagcagcagcgccaacgcctcgtgtcg
gacagcgaatcggacggcggcggcgggcagagcccccgcgcgcccagcgacgccggcagc
cgtcgctcgcgatccgcccactcctcatcggaggatgagggaggacgcgccggccgtgac
gacgatgacgacgacgacggtgggagacgcgggggcggcaactccgatgaggacgaggag
gatgcggtggggggtgccccggcagggcggcgtcgccgtggcaacgtcgacgacgacgag
gaggaggaggcggcggtgtcgggctctgagcgagacggctcgggcagccccccggcctcc
gtcaggtcggcctcgcccgtcgactcggccgacgacagccagtga
DBGET
integrated database retrieval system
