KEGG   Petromyzon marinus (sea lamprey): 116944861
Entry
116944861         CDS       T09614                                 
Symbol
TSC1
Name
(RefSeq) hamartin isoform X1
  KO
K07206  tuberous sclerosis 1
Organism
pmrn  Petromyzon marinus (sea lamprey)
Pathway
pmrn04140  Autophagy - animal
pmrn04150  mTOR signaling pathway
pmrn04218  Cellular senescence
pmrn04910  Insulin signaling pathway
pmrn05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:pmrn00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    116944861 (TSC1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    116944861 (TSC1)
  09143 Cell growth and death
   04218 Cellular senescence
    116944861 (TSC1)
 09150 Organismal Systems
  09152 Endocrine system
   04910 Insulin signaling pathway
    116944861 (TSC1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    116944861 (TSC1)
SSDB
Motif
Pfam: Hamartin DUF3452
Other DBs
NCBI-GeneID: 116944861
NCBI-ProteinID: XP_032814579
UniProt: A0AAJ7WY77
LinkDB
Position
22:2583115..2608731
AA seq 1182 aa
MSALSEERVPSEEVIAAWEDYLTRVGLKRWTLDGIMTTQQVNATELLSLLESSELQVAED
VRSLLVENLNVERGPWLMNSLVDYYMSHNSDQALQILCSVREPHDKHLLDKLNECMARAA
TRLPSLNLLGHVVRRQPSWIHKIYRAPVFASLLKCLKTDSNEVVLTTGVLVLATLLPMIP
QAVKQHVHEIFDIFSRLASWGLKNAGHVPEVCVVHLHAGVYALFHRLYGMYPCNFLSYLR
AHYSMRENSTLFTEVILPMVERVRVHPELVTGTKEYEMDTSKWKKYETQDVVIECAKVSL
DSKEASSEEGFCPVPDQLPLHCLSQATPDVSLQSGASLSGSISTTPTSSRMSHSSTPMRV
RRLSMEEGDVRGHQKGILSSTAECSEVGWSPANVCGMSTPPSSRGMSPVHNQSDVAHGSS
SQHAISGTPLATPTTSPGPTPSDEYVHISLDSTGSCADAQQEKPRPGVSETGSAGKVTAP
SIDRSLNNSAAERHAAKSSAVEVGKQAESEGGGESAVGSPGKVSLKELQMVIENLASCAP
AEKDGEDVAVNNEVSEINEMCPAPADHRGGFDSPFFSADAAPPGTQAVPGTHGGEAAVTQ
AVQQTSRSTSNKTQDRSTTSSFALTPASACGRAAAVSATCYPYEHLFALAFPRAAVGAFV
DHKSAELRGLDGSHHSGSPCGVAPSPLDVIDVLMQRGGDVHAKELSRLSLPSQAADWTHF
GGSVPPEEMHLLHSRLHLLHAQLLYERHKREQHALRNRRLLRKVITATALQEQNAAMRDQ
LRLQDEEILVLRRSLTEEQQRSQQQRMEKEQNMGFYQVQLRSLQSDRDSLSASNRELQCK
LDETYRDVVRLKVELQKANCKVYDTIHELQRLQEKLESSETLSQQADMLNRQLLVLGELN
ELYREELHNINHYADKEGEMCLLSHRRELEKARQCMRQQAQRVDAASRRINDLENSIMAK
DILLLEQKRFLENVKNQGRSQQQAMESKYKAQKRINQALESHMLELYSCLEVLESPAGFT
DRPLSLLCRKERALGGNVADADSATPLPVAAGPERPASLLPGAPIDARVPLVSADPPSAG
LMGVAASNPYPPSRSFLGQHARELLRSRGGGGCDDNREDDASADASSAAGVPREPPSSMA
APASASHARGTTRNLGGGGQHQQHALNVRILQQRGIMDYDEK
NT seq 3549 nt   +upstreamnt  +downstreamnt
atgtccgcgttgagcgaggaacgggtgccctcggaggaggtgatcgcggcgtgggaggat
tatttgacccgagtggggctgaagcgctggaccctggacggcatcatgacgacacagcag
gtgaacgccaccgagctgctgagcctgctcgagtcctcggagctgcaggtagcggaggac
gtgcgcagtctgctcgtcgaaaacctcaacgtcgagcgtggtccgtggctgatgaacagc
ctggtggattactacatgagccacaattcggaccaggccctgcagatcctctgttctgtc
cgtgagccgcatgacaagcatctcctggacaaattgaacgagtgcatggcccgggcagcc
actcggcttcccagtctcaacttgctgggtcatgtcgtgcggaggcagccgtcctggatc
cacaagatctacagggctcccgtgtttgcgtcgctgctcaagtgcctaaagacggattcc
aacgaggtggtgctgaccacgggggtgctggtgctcgccacgctgcttcccatgattccg
caagccgtcaagcagcacgtgcacgagatcttcgacatcttcagccgcctcgcctcgtgg
gggctcaaaaatgccggccacgtcccggaggtgtgcgtggtgcacctgcatgccggcgtg
tacgccctgttccaccgcctctacggcatgtacccatgcaacttcctgtcgtacctgcgt
gcgcactacagcatgcgggagaacagcaccctcttcacggaggtcatcctgcccatggtg
gaacgcgtgcgggtacatccagaacttgtcacggggaccaaggagtacgagatggacacc
agcaagtggaagaagtatgaaactcaggacgtggtcatcgagtgcgccaaagtgtcgctc
gattcaaaggaggcgtcgagtgaggagggtttctgccccgtccctgatcagctgcctctg
cactgcctgtcccaggcgacacccgacgtctccttacagtcgggagcgtctctctctggc
tccatttccacgacacctacatcgtcgcggatgtctcattcctccacgcccatgagggtg
cgccgcctctcaatggaagaaggcgatgtcaggggccaccagaaggggatcctgagctcc
acggcggagtgcagcgaggtgggttggagccccgccaacgtgtgcgggatgagcacgccg
ccgtcgtcccgcggcatgtcgcccgtgcacaaccagagcgacgtcgcgcacggcagctcg
tcgcagcatgccatttcggggacccctttagcgaccccaaccacgtcccctggaccgacc
ccctcggacgagtacgttcacatctctctcgacagcaccggctcctgcgcggatgctcaa
caagaaaagcctaggcctggcgtcagtgagacaggcagtgcaggcaaggttactgccccc
tccattgacagatctctgaacaactctgcggctgagcgccacgctgccaagagcagtgcc
gttgaagtgggaaagcaagcggagagcgaaggaggaggggagagtgccgtgggcagcccg
ggcaaggtgtccctgaaagagctgcagatggtcatcgagaacctggcctcctgcgcccct
gcggagaaggacggtgaagatgtggcggtgaacaacgaggtatcggagatcaacgagatg
tgtccagcgccggccgaccaccggggcggcttcgactcgcccttcttcagcgccgatgcg
gcgccgcccggcacgcaagccgtgccgggcacccacggcggggaggcggccgtgacgcag
gcggtgcagcagacgtctcgtagcacgagtaacaagacacaggacaggtcaaccacctcc
tcttttgcgctcaccccagcctcggcctgtggccgagcggcggccgtgtcggcaacatgc
tacccgtacgagcacctgttcgcgctcgccttcccgcgagcggcggtgggtgcgtttgtc
gaccacaagtcggccgagttgcgcggcttggacggctcccaccacagcggctctccctgc
ggagtggcgccgtcgccactcgacgtcatcgatgtgctcatgcagaggggtggcgacgtt
cacgccaaggagctcagccggctgtctctccccagccaagcggcagactggacacacttt
ggaggctccgttcccccggaggagatgcaccttctgcacagccgcctgcacctgcttcat
gcgcagctgctctacgagaggcacaagcgcgagcagcacgccctgcgcaaccgtcgcctg
cttcgcaaggtcatcactgccaccgcgctgcaggagcagaacgccgccatgagggaccag
ctgcgcctgcaggacgaggagatcttagtgctgcgtcgcagcctgacagaagagcagcag
aggagccagcagcaacgcatggagaaggagcagaacatgggcttctatcaggtgcagctg
cgctccctgcagtccgaccgtgacagtctgtctgccagcaaccgtgaactgcagtgcaag
ttggacgagacttacagggatgtggttcggcttaaagtggaactgcaaaaagccaactgc
aaggtgtacgacacgatccacgagctccagcgtctgcaggagaagctggagtccagcgag
acgctgagccagcaagcggacatgctcaaccggcagctgctggtgctcggcgagctcaac
gaactttaccgcgaggagctgcacaacatcaaccactacgcggacaaggagggggagatg
tgcttgctgtcgcaccgccgcgagctggagaaggcgcgccagtgcatgcggcagcaggcg
cagcgtgtggacgcggcgagtcggcgcatcaatgacctggagaacagcatcatggctaag
gacatcctcctcctggagcagaaacgcttcctcgagaacgtcaaaaaccagggcaggagc
cagcagcaggcgatggagagcaagtacaaagcgcagaagaggatcaaccaggcgctggag
agccacatgctggaactctacagctgcctggaggtgctggaatcgcctgctggtttcaca
gaccgccccctcagtttgctgtgcaggaaggagagggcgctcggaggcaacgtggcagac
gcagactcggcgaccccgctgcccgtcgccgctggacccgaacgaccggccagcctgctg
cccggcgcgcccatcgatgcccgtgtgcccctcgttagcgcagatccgccgtccgctggc
ctgatgggggtagccgcgagcaacccataccctccgtcccgcagcttcctgggacagcac
gcgcgggagctgctacgcagtcgaggaggtggcggctgcgatgacaaccgcgaggacgac
gcgagcgcggacgcttcgtcggcggccggcgtgcctcgtgagccgcccagttccatggcg
gcgccagcgtccgcatcgcacgctcgcgggaccaccaggaaccttggcgggggtgggcag
caccagcagcacgccctgaatgtcaggattcttcagcagcggggaatcatggactacgac
gagaaatag

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