Petromyzon marinus (sea lamprey): 116944898
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Entry
116944898 CDS
T09614
Name
(RefSeq) integrin alpha-8-like
KO
K06584
integrin alpha 8
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04510
Focal adhesion
pmrn04512
ECM-receptor interaction
pmrn04514
Cell adhesion molecule (CAM) interaction
pmrn04810
Regulation of actin cytoskeleton
pmrn04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
116944898
04514 Cell adhesion molecule (CAM) interaction
116944898
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
116944898
09142 Cell motility
04820 Cytoskeleton in muscle cells
116944898
04810 Regulation of actin cytoskeleton
116944898
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pmrn04515
]
116944898
Cell adhesion molecules [BR:
pmrn04515
]
Integrins
Integrin alpha subunits
116944898
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_1
Integrin_A_Ig_2
FG-GAP
FG-GAP_3
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
116944898
NCBI-ProteinID:
XP_032814682
UniProt:
A0AAJ7TDN2
LinkDB
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Position
2:3424923..3544668
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AA seq
1096 aa
AA seq
DB search
MRTGRLQLHAGSCSSTATPPAHRVPGSPTRGGLRCQGPGSLLLLLLLVVVVLLALLGPTA
AFNLDESRPKVFTGPQGSYFGYSLDFYSPERYSNGIVVGAPKAHTDAHPNVTQPGAVFMC
LLREENCTRIPLGPPDELYTQIRLGSPPERMEYKSHQWFGATVRTHGETLLACAPLYSWR
TFKSEEAEQEPVGTCFLSRGNFSSQAEYSPCRTGKSDQNGQGVCQAGFSADFTKAGWVVL
GGPGSFFAQGQVMAASSKVVFRQKSRFLLSRVEGQKETAETPANNDDAYMGYSVAVGEFT
GDSVQEFVTGVPKGSSTFGYVLILNTTDMSTLMNVTGEQLASYFGYTVAVTDVNNDGLDD
LLVGAPLYMERGSQGRLEELGRVYLYLQQAPLSLGAAQTLSGRDVYGRYGSAITPVGDLD
QDGYNDVAVGMPFGGEDGTGVVFVYNGRDTGLMAIPSQTLRGRWASQGLPASFGFALRGG
TDLDSNGYPDLIVGAFGVDKAIVYRARPVVTVSAELTVSPMVLHPENRSCMVTGYATLQS
CFSVEFCLKVSGKRIPVTVGMEVEVLLDKLKEKGAIRRVLFRDSKSPRFRTRLQMGRGLQ
EQCSTLTAYLRDESEFRDKLSPIVVSLNYSLDGEYNSNHSTVVPILNHYQADHIQKQAYI
LLDCGEDNICMPDLQLAGYLERTELFMGDTSPLTLTLNCSNHGEGAYEAELQVAVPPEGD
YIGSTRSSEGLGTSDGNVFAPICTLKEENNTRLVVCDLGNPMKAGTNLLIGLRFDFKNMA
YDSSSITFNANMKSTNKDNPESQPLALRAELAVLAQVDIRGVSIPDATAIYAAEWKLAAP
MSYQEEIGPSLQQVFEVHNNGPSWVKAGWLDVKVPHQHDDDFLLYPLQVTTEGPLNCTFS
MPLNPLNLQPRLTSMEPTDNSSAVAPSPNPRHLIVRREAGERPPSPRVLGCSSSSSSSQC
LHVTCQLGMLPRRTSAVLILRSRLWAPSFLKGGQNQVVLQTSAAFRVTEMPYKLLPDEFP
SGSRVVNTTVVLVKAGFQRPVPYWVIFLAVLAGLLLLALLVYALWKMGFFKRERYMHDEI
PAEKAFLKPRQNGVEA
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atgcggactggtcgtctgcaactgcacgcggggagctgctcgtccacggcgactccccca
gcccacagggtgccgggctctccgacacgcggtgggctccggtgccagggacctggtagc
ctcttgttgcttctgctgctggtggtggtggtgttactcgccctgctgggacccaccgct
gccttcaacctggacgagtcgcgtcccaaagtattcacgggacctcagggcagctatttt
ggatactcgttggatttctacagcccagagagatacagcaatggcattgtggtgggagcc
cccaaagcgcacacagatgcgcatcccaacgtgacgcagcctggggccgtcttcatgtgc
ctcttgcgtgaggagaactgcacgcgcattcccctgggaccgcccgatgagctgtacacg
cagattcgcttgggaagccctccggagcgaatggagtacaagtcgcaccagtggtttgga
gccactgtcaggacacatggtgaaactctgctggcttgtgcgcccctgtatagctggcgc
acattcaagagcgaggaggccgagcaggagcctgtggggacctgcttcctctcgagggga
aacttctccagccaagccgagtactctccctgccgcacaggcaaaagtgaccaaaatgga
caaggagtgtgccaagccggttttagcgccgactttaccaaggctggatgggtagtgctt
ggaggcccagggagcttctttgctcaaggccaggtcatggctgcctcctccaaggttgtg
tttcgccagaaatccaggttcctgctgtcccgagtggagggccagaaggagacagctgag
actccggccaacaatgatgacgcgtacatgggttattctgtggctgttggagaattcaca
ggagactctgtgcaagagtttgtcaccggtgtgccgaaaggatccagtacgtttggatac
gtgctcatcctcaacacaacagacatgagcactctcatgaacgtcacaggagaacagctg
gcttcctactttggctacacggtggcagtcacggatgtgaataatgacgggctggacgac
ctgctcgtgggcgcccctctctacatggagcgcggctcccagggtcgcctggaggagctg
ggccgcgtttatctttacctgcagcaggcgccgctcagcctgggtgccgcacagacgctg
tccggccgagacgtttatggccgctacggcagcgccatcacgccggttggagacctcgac
caggatggatataatgacgttgcagtgggaatgccgtttggaggggaggatggcaccggt
gtggtgtttgtttataacgggcgagacacgggcctgatggctataccatcccagacgctg
cgtggacgctgggcatcacagggcctcccggccagcttcggattcgcactccgtggggga
actgacctcgactcaaacggctacccagatttgattgttggagccttcggagtggacaag
gccattgtgtatagggcgcgcccagttgtgacggtcagcgcggagctcacggtctccccc
atggtgctgcaccccgagaacaggagctgcatggtgactggttacgctaccctgcagtcc
tgcttttcagtggaattttgcctgaaggtttctggaaagagaatacctgttactgtaggc
atggaggtggaggtgctgctggacaagttgaaggagaaaggcgccatccgtcgagtgctc
ttccgggactccaagtcgccgcgcttcaggacgcgtctgcagatgggccggggacttcag
gagcagtgctcaaccctcacagcgtatctcagggatgaaagtgaattccgggacaagctg
tctcccatcgtggtgtctctgaactacagcctggatggagagtacaactcgaatcacagc
actgtggtgccaattcttaaccactaccaggcagaccacatccagaagcaggcatacatt
ttgctggactgtggagaggacaacatctgcatgccagaccttcagctcgctggatatctg
gagcgcacggagctcttcatgggtgacacgagcccgctgacgctcacgctcaactgctcc
aaccacggcgagggcgcctacgaggcggagctgcaagtcgccgtgccccccgagggggac
tacatcggcagcacgcgcagcagcgaggggctgggaacgagcgatgggaatgtcttcgcc
ccaatctgcaccctgaaggaggagaacaacactagattggttgtttgtgacctggggaac
cccatgaaagctggcacgaatcttctgattgggctccggtttgatttcaaaaacatggct
tatgacagctcatccatcaccttcaatgccaacatgaaaagcaccaacaaagacaacccg
gagagccagcccctcgctctgcgcgccgagctggctgttttggcgcaggttgacattcgg
ggtgtgtccataccagatgcaacagccatctatgctgctgagtggaaattggccgcaccc
atgtcttatcaggaggagatcggaccttcactccagcaagtatttgaggtccacaacaat
gggccgagctgggtgaaggcaggctggttggacgtgaaggtgccccaccagcatgatgac
gacttcctactctacccgctgcaggtcaccaccgaagggcccctcaactgcacgttcagt
atgcccttgaacccgttgaatctacagccacgtttgacttcaatggagccgaccgacaat
tccagcgcagtggcaccatcgccaaaccctcgccacctcatcgtgcgcagggaggccggg
gagcgcccaccttcgccacgcgtgctgggttgcagcagcagcagcagcagcagccagtgc
ctgcatgtcacctgccagctgggtatgctgccgcgacgtacgagcgcggtgcttattctt
cgctcccggctctgggcccccagcttccttaagggaggacaaaatcaagtcgtcctacaa
accagtgctgctttccgggtcactgagatgccctacaaactacttcctgatgaattccca
tcaggaagcagagtggtgaacacgacggtggttcttgtgaaagcggggttccagcgcccc
gtgccctactgggtgattttcttggctgtgctggccggtctgctgctcttggccctgctt
gtctatgccctgtggaagatgggatttttcaagcgggagcgctacatgcatgatgagatt
cccgctgaaaaagcgtttctcaagccgcggcagaatggagtggaagcctga
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integrated database retrieval system