Petromyzon marinus (sea lamprey): 116944932 Help Entry 116944932         CDS       T09614                                  Name (RefSeq) collagen alpha-1(I) chain-like   KO K19719   collagen type II alpha Organism pmrn  Petromyzon marinus (sea lamprey) Pathway pmrn04510   Focal adhesion pmrn04512   ECM-receptor interaction pmrn04518   Integrin signaling Brite KEGG Orthology (KO) [BR:pmrn00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     116944932    04518 Integrin signaling     116944932  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     116944932  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:pmrn00536]     116944932 Glycosaminoglycan binding proteins [BR:pmrn00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    116944932 SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI VWC VWC2L_2nd Motif Other DBs NCBI-GeneID:  116944932 NCBI-ProteinID:  XP_032814777 UniProt:  A0AAJ7WYS8 LinkDB All DBs Position 2:3698209..3756625 Genome browser AA seq 1463 aa AA seqDB search MSIFVHGRILLLLAALQALFITASSQRQNPEGSCEYDGQVYTDRAIWKPEPCRICLCDQG TIMCDQISCEQLDCPNSIVPQGECCPVCTQARGPKGEKGQPGDPPRFTIRPGPQGGVGPS GDGGPRGARGRKGIKGMDGPRGRDGEPGIPGNPGPAGPAGQMSDDTSYLGMGGNFAAQYK DQPGPPPPGPPGPMGPRGAPGSVGASGPAGYQGAPGEPGSLGPPGPVGPPGPPGAVGKNG DDGEAGRAGRNGERGLPGAQGGRGFPGTPGLPGIKGSRGFNGKDGGKGETGAAGARGESG SPGANGGPGAAGPRGSPGERGRTGPNGPAGARGNDGQSGPPGPRGPNGPTGPAGFPGPPG PKGDTGGPGARGPDGAQGQRGEPGASGPAGPAGPAGLAGSDGGVGAKGAAGAPGMAGAPG SPGSVGGPGAAGSVGPPGPRGASGEPGLNGNKGEPGAKGDPGPSGSAGPSGPTGAAGKRG GRGEPGSGGPPGPVGERGAPGSRGAPGGDGSPGAKGPPGERGATGPAGAKGNSGDPGRPG EAGLPGPRGSTGSPGHAGSDGKTGPPGPAGNDGSPGSPGAAGARGAPGAMGFPGAKGPSG ESGKPGEKGSVGPVGPIGLPGKDGDAGPAGPAGPAGPGGERGEAGPVGAPGFQGLPGAPG APGESGKAGEPGLPGENGMPGGAGPRGERGAPGERGESGAGGPPGPRGSNGAPGQDGSRG AAGPPGPAGTVGAAGLQGMPGERGASGLPGAKGERGEAGPVGIAGGPGKDGPRGLSGPVG PAGPTGSNGERGEGGPPGPAGPAGGRGAPGERGEPGPPGSAGFPGAPGADGMPGARGEAG ETGARGEPGQAGPPGNSGPSGPVGPPGATGAKGDRGPAGPPGATGFPGAAGRVGPPGSAG GPGAPGPAGPDGKDGSRGMRGETGPPGKSGEVGAAGPAGPPGEKGSSGSDGPAGPQGAPG SAGLAGSRGLVGMPGQRGERGFSGLPGAPGEPGRQGPPGPAGERGASGPAGPPGIPGPSG ESGRDGNPGSDGLPGRDGIQGNKGDRGPGGNAGPPGSPGPAGPPGAPGPAGNNGNKGEPG PAGPSGASGTTGARGPAGPAGPRGDKGDAGSAGEGGIKGHRGFSGLPGLPGPPGAPGDRG IAGVFGSAGARGLPGPTGPSGKDGISGNPGPAGPAGPRGRTGETGPPGPPGSPGPPGPPG SSGAGYDMGAYAGLMARRKMGDQATDMLPYGLVLDASIKALNAQVESITSPDGSRKHPAR SCRDLMLCHPEYKSGEYWIDPNEGCRADAIKVWCNMETGESCVNPGMPSLPRKNWWRSQA ADKKHVWLGETMSPGSQFTYGDGSPNMEVQLTFLRLLSTDASQKITYHCKNSVAYLDSRA GNLKKALMLQGSSDVEIRAEGNSRFTYSVLEDGCTTHTGVWGKTVIEYRTQKTSRLPFMD IAPMDVGGSDQEFGVDVGPVCFL NT seq 4392 nt NT seq  +upstreamnt  +downstreamnt atgtcgatctttgtgcacggccggatactgctgctcctggcagcgttacaagcgctcttc atcacagccagcagccagcggcaaaatccggaaggaagctgcgaatatgacggccaagtg tacacagaccgggcgatatggaagccagagccctgccgcatttgcctgtgtgaccaggga accataatgtgcgaccagatctcatgcgagcaacttgactgccccaactcaattgtaccc cagggcgagtgctgccccgtttgcacacaagcccgaggaccgaaaggagagaagggtcag cctggagacccacccagattcacgattcgccctggacctcagggaggagtgggtcccagc ggcgatggtggtcccagaggtgcccggggacggaagggaattaagggcatggatggtccc cgaggaagggatggagaacccggaattcccgggaatcccggcccggctgggccagctggc cagatgtctgacgatacttcctacttgggcatgggcgggaactttgctgctcagtacaag gatcaacctggaccaccaccacccggacccccgggacccatgggaccccgaggtgctccc ggttccgttggagcctcgggcccagctggataccaaggagcccctggtgagcctggcagt ctgggaccacctggcccagtcggacctccaggtcccccaggcgctgttggcaagaatgga gatgatggtgaggctggccgtgcaggcaggaatggagagcgaggattgcccggtgctcag ggaggtcgtgggttcccaggaacccctggtcttcccggcatcaagggaagcaggggcttc aacggaaaagatggagggaagggagagaccggtgctgctggagcaaggggagagtccggt agccctggcgctaatggtggaccaggcgcagcgggcccacggggttcgcctggcgagagg ggccgtacaggacccaatggccctgctggagcacgtggtaacgatgggcagagcggtccc ccagggcccaggggacccaatggacccactggcccagctggtttccccggtcctccagga cccaagggtgacacaggaggacctggagctcgtgggcctgatggggcgcagggtcaacgt ggagagcctggagcctcaggccctgcaggacctgctgggcctgccggtctggcaggatct gatggcggtgttggagccaaaggtgctgctggtgcccctggcatggctggtgccccaggt tccccaggaagcgttggtggcccaggagctgccggatcagtcggaccgcccggccccagg ggtgccagtggagagcctggcctgaatggaaacaagggagagcctggtgccaagggtgac cctggcccatctgggagtgcgggtccttctggcccgacaggagcagccggcaagcgtgga ggtcgtggagagcctggatccggaggtccacccggccccgttggcgagaggggagcccct ggaagccgtggagcccctggtggagatgggtcacctggcgcaaagggtcctcctggagag aggggtgccacaggcccagctggagctaagggtaattctggagaccctggcaggcctggc gaagccggacttcctggtcctcggggttcgactggaagtcctggacacgctggcagcgat ggcaaaaccggcccccctggccccgctggaaatgatggtagccctggatcccctggcgct gctggtgctcgtggggctcctggagcaatgggtttccccggtgccaagggcccatccggt gagtctggcaagcctggagagaagggctctgttggacccgttggccccattggtctgcct ggcaaggatggagatgctggccctgctggtcccgctgggcctgctggtcctggtggagag aggggagaggcaggtcctgttggtgcccctggttttcagggattgcctggtgctcctggt gcgcctggcgagtctggcaaggctggcgagccgggtctccctggtgagaatgggatgcct ggtggtgctggtccaagaggagagcgtggagctcccggcgagaggggagaaagcggcgca gggggcccacccggaccccgtggaagcaacggtgctcctggccaggatggatctaggggt gctgcaggtccccctggtcccgcgggcactgttggtgctgccggcctgcaagggatgccg ggagagcgcggagcttctggtctgcctggcgccaagggcgagcgaggcgaggctggtcct gttggtatcgctggtggtcccggcaaggatggccccaggggattgagcggtccagtcggc cctgctgggcccaccggatccaacggagagaggggtgagggaggtcctcctggccctgct gggcccgctggtggtcgtggagctcccggtgagcgtggcgagcctggtcctcctggatca gctggattcccaggggctcctggcgccgatggtatgcccggggcacgaggtgaggctgga gagacgggagcccgcggagagccaggccaggccggacccccaggaaacagcggtccttct ggccctgtcggtccacctggagctactggtgctaagggagaccgtggcccagctggccct ccgggagctactggattcccaggtgctgcaggaagagtgggacctccaggctctgctggt ggccccggtgctcccggcccagccggtcccgatggaaaggacggcagcaggggaatgcgc ggagagaccggtccccccgggaagagcggagaggttggagctgcaggacccgccgggcct cccggcgagaagggatcatctggcagcgatggccctgccggaccccaaggagctcctgga tcagctggtttggctggcagccgtggtctggttggtatgcctggccagcgtggagagcgt ggattctctggacttccaggagctccgggtgagcccggaaggcagggcccaccgggtccc gctggagagagaggagcatctgggcctgcaggtccacccggcatccctggcccatccgga gagagcggccgcgatggaaatccaggaagcgatggtttgcctggccgcgatggaattcag ggcaacaagggagaccgtggtccaggcggaaatgctggtccccccggatcccccggccca gctggtccacccggagcccccggccctgctggaaataatggcaacaagggagagcctggt cctgctggtccttctggtgcttccggtaccactggtgcccgtggtccagcgggtcccgca ggtcctcgcggtgacaagggtgatgccggttccgctggagaaggaggaatcaagggccac cgtggattctcgggtctgccaggtctccctgggcccccgggtgctccaggtgacaggggc attgctggagttttcggctctgctggtgccaggggtctccctggcccaactggccccagc ggtaaggatggcatcagtggaaatcctggccctgccggccctgctggacctcgaggccgc actggagagaccggtcctcccggccctcccggatctcctggaccccccggccctcccggc agctctggcgccggctacgacatgggcgcatacgctgggttgatggcacgccgcaagatg ggtgaccaggccactgacatgctgccatacggcctggtgctggacgcctccatcaaggca ctgaacgcccaagtggagagcatcacctccccggacgggagccgcaagcacccagcccga tcctgccgggatctcatgctctgccatcctgagtacaagagcggcgagtactggatcgat cccaacgagggctgccgtgccgacgccatcaaggtgtggtgcaacatggagacgggcgag agctgcgtgaacccgggcatgcccagcctgccacgcaagaactggtggcgcagccaggca gccgacaagaagcacgtgtggctcggagagaccatgagccccgggtcccagttcacgtac ggtgatggcagcccgaacatggaggtgcagctgaccttcctgcgcctgctgtccaccgac gcatcccagaagatcacctaccactgcaagaacagcgtggcctacctggacagccgtgcc ggcaacctcaagaaggccctgatgctgcagggctccagcgacgtggagatccgtgccgag ggcaactctcggttcacttactctgtgctggaggatgggtgcactacgcacaccggcgtg tggggcaagacggtgatcgagtacaggacgcagaagaccagccgcctgccgttcatggac atagcaccaatggatgtcggtggttccgaccaggagtttggcgtagatgtcggtcccgtc tgcttcctgtaa

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