Petromyzon marinus (sea lamprey): 116944934
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Entry
116944934 CDS
T09614
Symbol
SMARCAD1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 isoform X1
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmrn03036
]
116944934 (SMARCAD1)
Chromosome and associated proteins [BR:
pmrn03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
116944934 (SMARCAD1)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
CUE
DEAD
ERCC3_RAD25_C
HHH_3
Na_Ca_ex_C
Motif
Other DBs
NCBI-GeneID:
116944934
NCBI-ProteinID:
XP_032814778
UniProt:
A0AAJ7WZT4
LinkDB
All DBs
Position
22:5917270..5939096
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AA seq
1072 aa
AA seq
DB search
MSAFNLQRFRFEGRSPPQPRPRVPADSAGTTTPRREAVISIPETPESERKGWKPPTLKSP
LKALHSNSNGEKNNQRPLASQLCTPKNKGQHHSAKGVHYSDSDSDGKDDAPDTTAKANCT
SSKPNSVRYKLLKMREMFPQRTDDELLEVIKVTTTLDGAVASALLIFPPDTDSNRKRKPI
SQESTSMDSHTKFSQPSSKRMKKHDDSDSGRNGAQSLKDRNRMVSRLQAKFPDLDKEELR
EVLSQHGWSYENALISIQAFAGDGESDSDDEDIVEREMRVEKKEEKFEEPAVVHKVKPNS
VMAERARQKLAMFSHKPVSSASSKKFLSGPILQNGTAKNGSPSRGAAPVKANSKSVKGGI
RAKQPIKEACKPKAKPSSIRKMSSSSASEDDDEKPMTTESDTDCDDVGDEDAVTDNDDCG
LSVEKRAKVLAFFCDATIEELTLVHGCSNKKADLIVELRPFTSWDDLMRKLTTKKGLSDL
VWESNTVLKEREVVLRLMAGCSDVAGGLESCVNRLRRKELADDDKEHRMLRQPPILNPAC
KMKSYQLVGLNWLALLHKQDVNGILADEMGLGKTVQAISFLAHLVELGEKDPHVIVVPSS
TLDNWTRELQKWCPDLKVLLYYGSQEERRHLRTDILHKQVDFNVIVTTYQCAITNVDDRS
LFRRLRINCAVFDEGHMLKNMASLRYQNLMTINARRRLLLTGTPVQNNLLELMSLLNFVM
PRMFSNSTQEIRRIFASSSTKNGQRQSKFERERIHQAKQIMKPFILRRLKIDVLQHLPRK
SERMELCPMSERQASLYTQLVQSFKKSSDGVKTTELCNVMMQLRKMANHPLMHRHLYTDD
KIRQMSQLILKEPTHYDADPALVQEDMEVLNDLELHRLCLQYPSLASHSLPRSAILSSGK
LQFLSTLLPALRSNGDRVVMFSQFTMILDILVQFLDHHGYSYLRMDGSTRVAERIGLIDR
FNEEPEIFVFLLSTRAGGLGLNLTSANTVILHDPDMNPYNDQQAEDRCHRVGQTRPVQVI
RLISAGTVEEAIVQMSKHKLQLQQDITVTNNKNIDNELPAELASLLQQMLGQ
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccttcaacctgcaaaggtttcgtttcgagggacggagcccccctcagccgagg
ccccgcgttcccgcggactctgccggcactacgacgccgcgccgagaggccgtgatcagc
atacccgagacaccagagtcagagcgaaaaggctggaaacctccaaccttaaagagccct
ctgaaggcgttacattcgaactccaacggtgagaagaacaatcagagacccctggcatcc
cagctctgcacgcccaaaaataaaggccaacaccactcggccaagggtgtacattactcc
gactctgacagcgatggaaaagacgatgccccggacaccactgccaaagcgaattgcacg
tcttccaagcccaacagcgtgcggtacaagctgctaaagatgagggagatgttccctcaa
cgcaccgacgacgagttgctcgaggtgatcaaggttacaactacactggacggagccgtg
gcatctgccctccttattttccccccggataccgactcaaaccgcaagcgtaaacccatc
tcacaggagtctacctcaatggacagccacacaaagttttcacagccctccagcaagcgg
atgaagaagcatgatgattcagactcgggcagaaatggtgcacagtccttgaaggaccgg
aaccggatggttagtaggttgcaagccaagttccctgacctggacaaagaggagctgcgg
gaggtgctcagccaacatggctggtcatatgaaaatgccctaatttctattcaagcgttt
gctggtgatggggaatctgactctgacgatgaagacatagtggagagggagatgagagtt
gagaagaaagaagagaagtttgaagagccagcagttgtccataaagtgaagcccaatagc
gtaatggcagagcgtgctcggcagaagctggccatgttttcacacaagcctgtgtcctct
gcctcctccaaaaagttcctgtcggggccaatcctacagaacggcactgccaagaacggc
agccctagtagaggggcagcaccggtcaaggccaattccaagtcggtcaagggaggcatc
cgggccaagcagcccatcaaggaggcttgcaaacccaaagcaaagcccagctccattcgt
aaaatgtcttcctcctccgcatcggaggatgatgacgaaaagccaatgactacggagagc
gacacagactgcgacgacgtgggtgatgaggatgcggttaccgataacgacgactgtggt
ctcagcgttgagaagagggcaaaggtgctggcattcttctgcgatgcgaccattgaggag
ttgacacttgtgcacggctgctccaacaagaaagcggacctcattgtggagctgcggccc
ttcacgagctgggatgacctgatgaggaagctgacaaccaagaaggggctctcagacctg
gtgtgggaatcgaacacggtgctgaaggagcgcgaggtggtgctgcgtctcatggcaggg
tgcagcgatgtggctggtggactggagagctgtgtgaaccgccttcgcaggaaggagttg
gccgacgatgacaaggagcatcgtatgctgcgtcaaccccccatcctaaaccctgcatgc
aagatgaagtcctaccagctggttgggttaaactggctggcacttcttcataagcaagat
gtgaatggaattttagctgatgaaatgggtttgggtaagacagtgcaagcgatctcattt
ctggcccatctggtagagctgggcgagaaagatccacatgtcatcgttgtaccatcatcg
acattggacaactggacaagggagctacagaagtggtgtcctgacctgaaggtgttgctt
tactacgggtcccaggaggagaggcgacacctccgcacagatatcctccacaagcaggtc
gacttcaacgtcattgtcaccacgtaccagtgtgccatcaccaatgtggatgaccgaagc
ctgttccgccggttgcgcataaactgtgccgtgtttgatgagggccacatgctcaagaac
atggcctctctgcgctaccagaacctcatgaccatcaacgcacgaaggcgactgttgctg
acgggtactccggtgcagaacaatctcctggaactcatgtctctactcaacttcgtgatg
ccgcgcatgtttagcaacagcacgcaagagatccggcgcatatttgcctcctcgtccacc
aaaaatggccaacggcagagcaagttcgaaagggagagaatccatcaggcgaagcagatc
atgaaaccgttcatcctccgccgactcaaaatagatgtgctgcaacatctgccgaggaag
tctgaacggatggagctgtgcccgatgtcggaacgccaggcttcgctgtacacacagctt
gtgcagagctttaaaaaatccagtgacggagttaagacgacagagctatgtaacgttatg
atgcagctgaggaagatggcgaatcacccgctgatgcaccgtcacctgtatacagacgat
aaaatccggcagatgtcccagctcatcctcaaggagccgacccactatgatgcagacccg
gcgctggtgcaggaggacatggaggttctcaacgacctggagctccaccgtctgtgcctc
cagtacccctcgctggcttctcacagcctgccgcgttccgccatactaagctccggcaag
ctgcagtttctctcaacgctattgccggccctcaggagcaatggtgatcgcgtggtgatg
ttcagccaattcaccatgattttagacatcctggtacagttcctggatcatcacggttac
tcttacttgcgtatggatggcagcactcgagtggcagagcgcattgggctcatcgaccgc
ttcaatgaggagcccgagatttttgtgttcctgctgtcaacgcgtgctggtggccttggc
ctcaacctgacgtctgccaacaccgtgatcttgcacgaccccgacatgaacccctacaat
gaccagcaggccgaggatcgctgccaccgcgtgggacagacacgcccggtgcaggtgatc
cggctgatcagcgctggcacggtggaggaggccatcgtgcaaatgtctaagcacaaattg
caactgcagcaggatataacggtcaccaacaacaagaacatagataatgaactgccagct
gagcttgcctctctgctacagcaaatgctgggccaatga
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