Petromyzon marinus (sea lamprey): 116944981
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Entry
116944981 CDS
T09614
Name
(RefSeq) procollagen galactosyltransferase 1-like
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn00310
Lysine degradation
pmrn00514
Other types of O-glycan biosynthesis
pmrn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
116944981
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
116944981
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pmrn01003
]
116944981
Enzymes [BR:
pmrn01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
116944981
Glycosyltransferases [BR:
pmrn01003
]
O-Glycan biosynthesis
O-linked Gal type
116944981
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
DUF4272
Motif
Other DBs
NCBI-GeneID:
116944981
NCBI-ProteinID:
XP_032814885
UniProt:
A0AAJ7TBN7
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All DBs
Position
22:8254141..8286815
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AA seq
679 aa
AA seq
DB search
MSLATLCRRLLPLLLLLLLLRGRAAAYFSEERSVPESGPRPPTVLLALLARNAARSLPYA
LGCVERLDYPKDRMALWVATDHNIDNTTAVLMEWLVGVQKMYHYVEWRPLAEPLSYLDEV
GPKHWSASRYEYVMKLRQGALNTARERWADYIFFMDVDNFLLNEKTLSFLVGQNRTIVAP
MLDSRTAYSNYWSAMTDQGYYKRAPEYLPVRERERLGCFRVPMVHSTFLIDLRREASRLI
NFYPPPPNYAWPFDDIIVFAASCKHFGVPMYICNQHRFGHLVVPGKAEITLQDDVDMFIH
THLEIMVEEPPMKPSQYIHMPERELDKMGFDEVYMINLKRRPERRDRMLRSLEEQQIQCK
VVDAVDGKALNKSQIRALGVDMLPGYHDPYSGRVLTKGEIGCFLSHYGIWQEVVGRGLPS
SLVLEDDVRFEPFFRHRLERLIADVKSLNLNWDLIYIGRKKMQIDTPERSVKDIRNLVWA
DYSYWTLAYAVSLQGARKLLAGEPLGRMLPVDEYLPVMFNKHPIKQYLEYFEPRDLRAFS
AEPLLVYPTQYTGEANYVSDTETSTIWDDRDGAAAPDTNWGPSPKMEGPGASGGAAEHSS
DDGGGNGGNKGEADEAGGTKGWEASGAAGVGAVGGGWPERGAGVAKGGAFAKELVDTQAA
RKTLGGATDIADATARDEL
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctggcgacgttgtgccgccgcttgctccccctgcttctgctgctgttgctgctg
cgtggccgtgcggccgcctacttctcggaggagaggagcgtgcccgaatctggtccccga
ccgcccacggtgctgctggccctgctggcgaggaacgccgctcgcagcctcccctacgcc
ctgggctgcgtggagaggttggactaccccaaggaccgcatggcactctgggtggctacg
gaccacaacatcgacaacacgactgcggtgctcatggagtggctggtgggcgtgcagaag
atgtaccactacgtggagtggaggcccttggcagaacccctgtcgtacctcgacgaggtg
ggccccaagcactggtcagcgtcgcgctacgagtacgtcatgaagctcaggcagggcgcc
ctcaacacggcgcgcgagagatgggccgactacatcttcttcatggacgttgacaatttc
ctgctgaacgagaagacgctgtcattcctcgtgggccagaaccgcaccatcgtggcgccc
atgctggactcgcgcactgcctactccaactactggagcgccatgaccgatcagggctac
tacaagagggcgcccgagtacctgcctgtgcgggagcgggagcgtctcggctgcttccgc
gtgcccatggtgcactcgacgttcctgatcgacttgcgtcgcgaggcgtcgcgcctcatc
aacttctatcccccgccgcccaactacgcctggcccttcgacgacatcatcgtcttcgcc
gcctcctgcaagcacttcggtgtgcccatgtacatctgtaaccagcatcgcttcggacat
ctggtggtgccagggaaggcagagatcacgctgcaggacgatgtggacatgttcattcac
acccatctagagatcatggtggaagagcctccgatgaagccatcccagtacatccacatg
ccggagagggagctcgacaagatgggctttgacgaggtgtacatgatcaacctgaaacgt
cgtcccgagcggcgggaccgcatgctgcggtcactcgaagagcagcagatccagtgcaag
gtggtggacgcggtcgacgggaaggcactcaacaagagtcagatccgggcactgggagtg
gacatgctgcccggctaccacgacccctactctggtcgcgttctcaccaagggagagatc
ggctgcttcttgagccactacggcatctggcaagaggtggtgggtcgtggcctccccagt
tcgctggtgctggaagacgatgtccgctttgagccgttcttccgccaccgcctggagagg
ctcattgcggacgtcaagagcttaaacctcaactgggacctgatatatatcggccgcaag
aagatgcagatcgacaccccggagcggtccgtgaaggacatacggaacctggtctgggcc
gactactcgtactggaccctggcgtatgcagtgtcactgcagggtgcgcggaagctgctg
gccggggagccgctgggccgcatgcttcccgtggacgagtacctgcccgtcatgttcaac
aagcatcccattaagcagtacctcgagtactttgagccgcgggacctgcgcgcgttctcg
gccgagccgctgctggtctacccgacgcagtacacgggcgaggccaactacgtgagcgac
acggagacctccaccatctgggacgatcgggacggcgccgcggcccccgacaccaactgg
gggccctcgccaaagatggagggacccggggccagcggcggcgccgccgaacattcgtcc
gacgacggaggcggcaacggtggcaacaaaggggaggccgacgaagccggcggcaccaag
ggttgggaggccagcggggccgccggagtgggggccgtgggcggcggctggcctgagagg
ggggccggcgtcgcgaaaggcggcgccttcgccaaggagctcgtcgacacacaggccgct
aggaaaaccctaggtggcgccacggacatagccgacgccaccgccagagatgagctgtag
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