Petromyzon marinus (sea lamprey): 116945068
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Entry
116945068 CDS
T09614
Name
(RefSeq) LOW QUALITY PROTEIN: voltage-dependent P/Q-type calcium channel subunit alpha-1A-like
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04010
MAPK signaling pathway
pmrn04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
116945068
04020 Calcium signaling pathway
116945068
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pmrn04040
]
116945068
Ion channels [BR:
pmrn04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
116945068
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Motif
Other DBs
NCBI-GeneID:
116945068
NCBI-ProteinID:
XP_032815064
UniProt:
A0AAJ7TC31
LinkDB
All DBs
Position
22:738363..837588
Genome browser
AA seq
2258 aa
AA seq
DB search
MSRYGDEMGGGSGRGGRGPHAGGAAPGGRRQIYKQSMAQRARTMAIYNPIPVRQSFLTLN
RSLFLFSEDNAVRKYAKRITEWPPFEYLILATIIANCLVLALEQHLPAGDKTPLSDQLDV
TEPYFIGIFCFECGIKIVALGLALHRGSYLRNGWNVMDFVVVITGILSMLGGSFDLRTLR
AVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGMLLFFAILMFAIVGLEFYKGDNLHM
TCFNNATGEQLGQQPCGTDSTARICHENVTECRLYWAGPNDGITQFDNIFFAVLTVFQCI
TMEGWTDVLYATNDAYGTAWNWLYFVPLIIIGSFFMLNLVLGVLSGEFAKERERVENRRE
FLRLRRQQQIERELNGYLEWICKAEEVLLAEEDRSADDKSAIEAMRRAAVINSRDDLMQA
EEGDDHFTDISSVGSPFTRAATFKSGGGSGGPGGVGGGGGGGGGGSGGGVAREGLSYVRR
RERRVRFCVRRLVKSQPFFWLVLCLVALNALCVGAVHYDQPAWLSLFLYYAEFVFLGLFL
LELCLKMYGLGPRAYFHSSFNCFDCLVIMGSVFDVLLTAIEPKTSIGISVLRTLRLLRIF
KVTKYWISLKNLVVSLLNSMKSIVSLLFLLFLFIVVFALLGMQLFGGSFNFEEKTPFTNF
NTFPNAILTVFQILTGEDWNTVMYDGILSQKGAGYSMCYSIYFIILTLFGNYTLLNVFLA
IAVDNLANAQELTKDEEEEEEAANQKLAFQKAMEVAEVSPMSAMNISLAVLEQSKPHKPM
TVWERRTSALRHSRSHLSQEALANSRGDSAGGAGDAGTGGAGTPRAPLRHSASLHVRPPS
LATGVAAAPARGATTRVSGAGAAAAASAAATYRDRPLLAREPGARPSAGPGAEDDGAAAV
PPSAPPPPPPADRHLEAVTERPLVLEPGGRSQGEEERRSLEDVCEVDEERQLEALERPLI
VVGGCCKSRVTPGSGGADGASPEEEAAAAPAASASCARNRRCRKHRSRSKEDERRCHHHR
SSGSNNNCGGNNHGQRQEEVDEESGAQPEARQRAGAASPPGEPCGRRLHRRHGRRGNDGT
EPAPATAAAAGDHVCPAGSVRTGASPAAPLAEGDADGDAGAAAPAGEAERESEGSGRSHT
DPSPGDPGDQGEEQGEQEAARSVTVNIIPPPEEQRGAAGPDGGGSRGPGAARRPSDGAQD
GARPAMAYRSMFLFSVRNPLRRACHYVVTLRHFEMSILTVIGLSSVALAAEDPVWPDSQQ
NNVLKYFDYIFTGVFTFEMVVKMIDQGLVLHAGSYFRDLWNILDFIVVAGAIIAFPLQGK
QGNTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVSSLKNVWNILVVYMLFMFIFAVVAVQ
LFKGKFFYCTDESKEFEKDCRGQFLVYDKKSVRVEQREWRRYEFNYDNVFQALMTLFTVS
TGEGWPLVLKNSMDITEEEQGPRPGAHMEMSVFYVVYFIVFPFFFVNIFVALIIITFQEQ
GDKVMSDCSLEKNERACIDFAISARPLSRHMPARRAALQHRLWTLVVSPPFEWLVMALIA
LNTLVLMMKFYGASNEYELVLKYLNVIFTILFSLECLLKLLAFGLLNYFRDAWNVFDCVT
VLGSITDILVDEFWGDFVSLGFLRLFRAARLIKLLRRGYTIRILLWTFIQSFKALPYVCL
LITMLFFIYAIVGMQVFGNIKLVEDNAVSRHNNFQTFLQALMLLFRSATGEAWQEIMVAC
KSGQPCEGYPGXGPPPDPTGCGSDFSYFYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDS
AILGPHHLDEYIRVWAEYDPAACGRISYLDMYEMLRHMSPPLGLGKRCPARVAYKRLVRM
NMPIADDKTVHFTSTLMALIRTALDIKISSAGGMIQQLEDLELRKEILTVWPNLSAKTLD
LLVPTHPPNALTVGKVYASLMIFDFYKTSKARRAQGAASPTHAGRNSSLFHRMVGAVTSP
QGPAPHVPIPAVRFQEPDSDDTGAPQSSLCPGESGLRASPSWVTQRAQEMCQRTRPHTPD
WGRGSEAAGGPGEPPTQLEAMVPLIARTACSEVLGVSEVDGSSDQESEYCLALEHQGLAS
SMPRLHHAHAQLLGDLSPMKRSMSAFDPTRLRLRDLDPARPRSTLDPADLEPRREGVGGG
GGGGNAWLAERTSRQTRRSRSRHRLSDSATDRGAPSGLREGASPCVCGAPGPQPPSREVC
VTMGDEEEAVEVNEMESCVDVSPGRAGRSGTGRRERLS
NT seq
6777 nt
NT seq
+upstream
nt +downstream
nt
atgagccgctacggggacgagatgggggggggatctgggcgagggggccgcgggccccac
gcaggaggcgcagcgccggggggtcgccgccagatctacaagcagtcgatggcccagagg
gcgcgcaccatggccatctacaaccccatccccgtgcggcaaagcttcctcaccctcaac
cgctccctcttcctcttcagcgaggacaacgcggtccgcaagtacgccaagcgcatcacc
gagtggccgcccttcgagtacctgatccttgcgaccatcatcgccaactgcctggtgctc
gcgctggagcagcacctccccgcgggggacaagacccccctctcggaccagctggatgtg
accgagccgtactttatcggcatcttctgcttcgagtgcggcatcaagatcgtggcgctg
gggttggcgctgcaccgcggctcttacctccgcaacggctggaacgtcatggacttcgtg
gtcgtcatcacggggatcctctccatgttggggggaagcttcgacctgaggacgctccgt
gccgtgcgcgtcctgaggccgctcaagctcgtgtccggcatccccagcctgcaggtggtg
ctgaagtccatcatgaaggccatggtgccgctcctgcagatcggaatgctcctgttcttc
gccatcctcatgttcgccatcgtgggcctcgagttctacaagggggacaacctccacatg
acgtgcttcaacaacgccacaggggagcagctcgggcagcagccgtgcggcacggacagc
acggcgcggatctgccacgagaacgtcacggaatgccgcctctactgggccggccccaac
gacggcatcacgcagttcgacaacatcttcttcgccgtgctcaccgtcttccagtgcatc
accatggagggctggaccgacgtgctgtacgccactaatgacgcgtacggcacggcgtgg
aactggctctactttgtccctctcatcatcatcggctccttcttcatgctcaacctcgtg
ctgggagtcctctcaggggagtttgcgaaggagcgcgagcgcgtggagaatcgccgcgag
ttcctgcgtctgcgccggcagcagcagatcgagcgcgagttaaacggatacctggagtgg
atctgcaaggctgaggaggtcctcttggccgaagaggaccgcagtgcggacgacaagtcg
gccatcgaggccatgcgacgggcagcggtgatcaacagccgggacgacttgatgcaggcc
gaggagggggacgaccacttcacggacatctcctctgtgggctcccccttcacccgcgcg
gccaccttcaagagcggggggggctcggggggccccggcggcgtcggcggggggggcggg
gggggcggggggggctccggggggggcgtggcgagggaggggctctcctacgtgcggcgc
agggagaggcgggtgcggttctgcgtgcgccgcctcgtcaagtcgcagccattcttctgg
ctcgtgctgtgcctggtggcactcaacgcgctgtgcgtgggcgccgtgcactacgaccag
cccgcctggctctccctcttcctctactacgcagagtttgtgttcctgggcctcttcctg
ctcgagctctgcctcaagatgtacggactcggcccgcgcgcctacttccactcctccttc
aactgcttcgactgcctggtgatcatgggcagtgtgtttgacgtgctgctcacggccatc
gaacccaagacgtcgattgggatctcggttctgcgcacgttgcggctcctgcgcatcttc
aaggtcaccaaatactggatctcgctgaagaacctcgtggtgtctctgctcaactcgatg
aagtcgatcgtctcgctcctcttcctgctcttcctcttcatcgtcgtcttcgccctcctc
ggcatgcagctttttgggggctcgtttaactttgaagagaagacgcccttcaccaacttc
aacaccttccccaatgccatcctcaccgtcttccagatcctgacgggcgaggactggaac
acggtgatgtatgacggcatcctctcgcagaagggcgcggggtacagcatgtgctactcc
atctacttcatcatcctcacgctcttcggcaactacacgctgctcaacgtgttcctcgcc
atcgccgtcgacaacctcgccaatgcacaggagctcaccaaggacgaggaggaagaagag
gaagcggccaatcagaagctggcgttccagaaggccatggaggtggcggaagtgagcccc
atgtcggcgatgaacatctccctcgcagtgctcgagcagtccaagccgcacaagcccatg
acggtgtgggagcggcgcaccagcgcgctgcgccactcgcgctcccacctcagccaggag
gcgctggcgaacagccggggcgacagcgccggcggagcaggcgacgccggcacgggcggc
gccggcacgccgcgcgcgccgctgcgccactcggcctcgctgcacgtccgcccgccgagc
ctggcgaccggggtcgcggcggcgccggcgcgcggcgccacgacgcgcgtgagcggcgcc
ggcgccgccgccgcggcgtccgccgccgccacctaccgggaccgaccgctgctcgcgcgc
gagcccggcgcgcgcccctcggcggggcccggcgcggaggacgacggcgcggccgcggtg
ccgccgtcggcgccgccgccgccgccgcccgccgaccgccacctggaggcggtgacggag
cggccgctggtgctcgagccgggcgggaggagccagggagaggaggagcggcgctcgctc
gaggacgtgtgcgaggtggacgaggagcgccagctggaggcgctggagcggcctctcatc
gtcgtcggcggctgctgcaagagccgcgtgacgccgggctccggcggagccgacggcgcg
agccccgaggaggaggcggcggcggcgccggcggcgtcggcgtcgtgcgcgcggaaccgg
cgctgccgcaagcaccgcagccgcagcaaggaggacgagcgccgctgccaccaccaccgc
agcagcgggagcaacaacaactgcggcggcaacaaccacgggcagcggcaggaggaggtg
gacgaggagtcgggggcccagccggaagcccggcaacgcgccggtgccgcttctccgccg
ggagagccgtgcgggcgccgactgcaccggcggcacggacggcgcgggaacgacggcacg
gagccggcaccggcgacggcggcggcggcgggggaccacgtgtgcccggcgggctcggtg
cgcacgggcgcgtcgcccgcggctccgctcgccgagggcgacgccgacggggacgcgggg
gccgccgccccggcgggggaggcggagagggagagcgaggggagcggccggagccacacc
gacccctcccctggggaccccggggatcaaggggaggagcagggggagcaggaggcggcc
cggagcgtcaccgtcaacatcatccccccgcccgaggagcagagaggggcggcaggcccc
gatggcggtgggtcgcggggccccggtgccgccaggaggccgagcgatggcgcgcaagac
ggggccaggccagcgatggcgtacagatccatgttcctgttcagcgtcagaaatccgctg
cggcgtgcgtgccactacgtggtgaccctgcggcactttgagatgagcatcctcaccgtc
atcggcctgagcagtgtggccctcgccgccgaggaccccgtgtggccggactcgcagcag
aacaacgtgctcaagtactttgactacatattcacgggcgtgttcaccttcgagatggtg
gtgaagatgatcgaccaggggctcgtgctgcatgccgggtcgtatttccgggacctgtgg
aacatcctggacttcatcgtcgtcgccggagccatcatcgccttccccctgcagggcaaa
caggggaacaccatcaagtccctgcgcgtgctgcgagtgctgcgccccctcaagacgatc
aagaggctccccaagctcaaggcggtgttcgactgcgtggtgagctcgctgaagaatgta
tggaacatcctcgtcgtctacatgctcttcatgttcatcttcgccgtggtcgccgtgcag
ctcttcaagggaaagttcttctactgcactgacgagtccaaggagttcgagaaggactgc
aggggtcagttcctggtgtacgacaagaagagcgtgcgcgtggagcagcgcgagtggcgc
cgctacgagttcaactacgacaacgtgttccaggcgctcatgacgctgttcaccgtctcc
acgggggagggctggcccctggtgctgaagaactcgatggacatcacggaggaggagcag
ggcccacgtcccggcgcgcacatggagatgtccgtcttctacgtcgtctacttcatcgtc
ttccccttcttcttcgtcaacatcttcgtggcgctcatcatcatcacgttccaggagcag
ggcgacaaggtcatgtccgactgcagcctcgagaagaacgagcgtgcgtgcatcgacttt
gcgatctcggcgcggccgctgtcgcgccacatgccggcgcggcgagccgccttgcagcac
cgtctgtggacgctggtcgtgtccccgcccttcgagtggctcgtcatggcgctcatcgcc
ctcaacacgctcgtgctcatgatgaagttctacggcgcctctaacgagtacgagctggtc
ctcaaatacctcaacgtcatcttcaccatcctcttctcgctcgagtgcctgctcaagctg
cttgcgttcggcctgctgaactacttccgcgacgcgtggaacgtgttcgactgcgtcacg
gtgctgggcagcatcaccgacatcctcgtcgacgagttctggggagactttgtgagtctc
gggttcctgcgcctgttccgagcggcgcgactcatcaagttactgcggcgtggatacacg
atccgcatcctcctctggacgttcatacagtccttcaaggcactgccgtatgtgtgtctc
ctcatcacgatgctcttcttcatctacgccatcgtgggcatgcaggtgtttggtaacatc
aagctggtggaggataacgccgtcagccgccacaacaactttcagacgttcctgcaggcg
ctcatgctgctcttcaggagtgcgacgggcgaggcctggcaggagatcatggtggcctgc
aagtcggggcagccgtgtgagggctacccggggnnggggccgccccctgaccccacgggg
tgcggcagcgacttctcctacttctacttcgtctccttcatattcctctgctcgtttctg
atgctgaatctgtttgtggccgtcatcatggacaactttgagtacctgacccgggactcg
gcgatcctgggcccgcaccacctggacgagtacatccgcgtgtgggccgagtacgacccg
gccgcctgcggccgtatctcatatctagacatgtatgagatgcttaggcacatgtcacct
cctctgggtctcggcaagagatgtcccgcgcgcgtggcctataagcggctggtgcgcatg
aacatgccgatcgcggacgacaagacggtccacttcacctccacgctcatggcgctcatc
cgcacggcgctcgacatcaagatctcctctgctggagggatgatccagcagctggaggat
ctggagctgcgcaaagagatcttgaccgtgtggcccaacctctccgccaagaccttggac
ctgctcgtgcccactcacccgccgaacgccctcacggtgggcaaggtgtacgcgtcgctc
atgatcttcgacttctacaagacgagcaaggcgcgacgagcacagggcgcggcctccccg
actcacgccggccgcaactcgtccctgttccaccgcatggtgggggccgtcacgtccccc
cagggccccgcccctcacgtccccatccccgccgtgcgcttccaggagccagactcggac
gacacgggggccccccaatccagcctgtgcccgggcgagtctggcctgcgtgcctcgccc
tcctgggtgacccagcgagcccaggagatgtgccagcgcacgcgacctcacaccccggac
tgggggcgcgggagcgaggcggccggggggcccggggagccccccacgcagctggaagcc
atggtgcccctgattgctcgcaccgcatgctccgaggtgctgggtgtgagcgaggtggat
gggagcagtgaccaggagagcgagtactgcctggcgctggagcaccagggcctcgcctcc
tccatgccgcgcctgcaccacgcgcatgcgcagctcctaggggacctgagccccatgaag
aggtcgatgtcagcgttcgaccccacgaggctccgcctgcgcgacctggaccccgcgaga
ccccgctccaccctggaccccgcggacttggagccccggagagagggagtggggggcgga
ggaggaggaggcaacgcgtggttggcggagcgaacgtcgaggcagacgcggcgctctcgg
agccggcacaggctcagcgacagcgccacagaccgaggggcaccgagcgggctcagggaa
ggggcgagcccctgcgtgtgcggggccccggggccccagcccccctcgagggaggtgtgt
gtgacgatgggcgacgaggaggaggcggtggaggtgaacgagatggagagctgcgtggac
gtgagccccggccgggcaggacggagcggcacgggaaggcgtgagcgcttgagctga
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