Petromyzon marinus (sea lamprey): 116945112 Help Entry 116945112         CDS       T09614                                  Symbol PRPF6 Name (RefSeq) pre-mRNA-processing factor 6   KO K12855   pre-mRNA-processing factor 6 Organism pmrn  Petromyzon marinus (sea lamprey) Pathway pmrn03040   Spliceosome Brite KEGG Orthology (KO) [BR:pmrn00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     116945112 (PRPF6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:pmrn03041]     116945112 (PRPF6) Spliceosome [BR:pmrn03041]  Complex B   U4/U6.U5 tri-snRNP components    U5 snRNP specific factors     116945112 (PRPF6)  Complex C    U5 SnRNP specific factors     116945112 (PRPF6) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  PRP1_N TPR_14 TPR_19 HAT_PRP39_N HAT_PRP39_C Suf HAT_Syf1_CNRKL1_C TPR_16 HAT_Syf1_CNRKL1_N TPR_2 TPR_17 FAT TPR_CcmH_CycH T7SS_EccA1_N TPR_1 EAD1 NatA_aux_su Motif Other DBs NCBI-GeneID:  116945112 NCBI-ProteinID:  XP_032815124 UniProt:  A0AAJ7TC71 LinkDB All DBs Position 23:complement(296437..310506) Genome browser AA seq 944 aa AA seqDB search MATASGVSGGLRKKKHFLGMPAPLGYVPGLGRGATGFTTRSDIGPARDANDPVDDRHAPP GKRTVGDQMKKSQEDEEEDLNDSNYDEFNGYAGSLFSSGPYEKDDEEADAIYCMVDKRLD ERRKDRREQREREEIEKYRMERPKIQQQFSDLKRKLAEVSEDEWLSIPEVGDARNKRQRN PRHDKLTPVPDSFLSKHMQNASDQHNSVDPRQLLLPGGGLNTPYPGSMTPSGLMTPGAGE LDMRKIGQARNTLMDMRLSQVSDSVSGQTVVDPKGYLTDLNSMIPTYGGDINDIKKARLL LKSVRETNPHHPPAWIASARLEEVTGKVQVARNIIMKATEMCPKSEDVWLEAARLQPGDS AKAVVANAVRHLPQSVRTWIRAADLETDLKAKKRVLRKALEQVPNSVRLWKAAVELEEPD DARILLSRAVECCPTSVELWLALARLESYENARKVLNKARENIPTDRHIWITAAKLEEAN GNTAMVEKIVDRAITSLRANGVEINREHWIQDAEECDKAGSVTTCQAVIRAVIGIGVEEE DRKHTWMEDADSCVSHGACECARAIYAFALQVFPSKKSVWLRAAYFEKNHGTRESLEALL QRAVAHCPKAEVLWLMGAKSKWMAGDVPAARSILALAFQANPNSEEIWLAAVKLESENNE DERARRLLAKARSSAPTARVFMKSVKLEWVLGEIPRAKELSEEALRHYEDFPKLWMMKGQ IEEQLQLNDKARDAYSQGLKKCPHSVALWLLLSRLEEHVGQLTRARAILEKARLKNPQNP ELWLESVRLEYRAGLKNIASTLMAKAMQECPSSGILWAEAIFLEARPQRKTKSVDALKKC EHDPHVLLAVAKLFWSERKISKAREWFHRTVKIDPDLGDAWAVFYKFELQHGSKEQQEDV RKRCENAEPRHGELWCAVSKDILHWRKKTGEILAQVASSIKNTF NT seq 2835 nt NT seq  +upstreamnt  +downstreamnt atggcgaccgcaagcggtgtgagcggcgggctacgcaagaagaagcacttcctgggcatg ccagcgcccctgggatacgtgcccggtctgggtcgaggtgccacgggctttacgacgcgg tccgacatcggtccggctcgcgatgccaatgaccccgtggacgaccggcacgcgccgccc ggcaaacgcaccgtcggtgaccagatgaagaagagccaggaggacgaggaggaggatctc aatgactccaactatgacgagttcaacggctacgctgggagcctattctcgagcggtccc tacgagaaggacgatgaggaggcagatgccatctattgtatggtggacaagcgcctggat gagcggaggaaggaccgccgagagcagcgagagcgggaggagattgaaaaataccgtatg gagcgacccaagatccagcagcagttctctgatctaaagcgcaaactggcggaggtgtcc gaggacgagtggctgagcataccggaggtcggcgacgctcggaacaagcggcaacgcaac ccgcggcacgacaaactcacgcccgttcccgacagtttcctctccaaacacatgcagaac gcgtcagatcagcacaacagcgtggacccacgtcagctgctgctgcctggtggaggcctc aacacaccctaccccggatccatgacccccagcggcctaatgaccccaggagccggggag ctggacatgcgcaagatcggccaggccagaaacacgctcatggacatgcgtctcagccag gtgtcagactctgtgagtggacagacggttgtggaccccaagggttacctcaccgatctc aactccatgatccccacctacgggggcgacatcaatgatattaaaaaggcacgcctgctg ctcaagtcggtgcgtgagacaaacccccaccacccgccggcatggatcgcctcggcgcga ctcgaggaggtcacgggcaaggtgcaggtggcccgcaacatcatcatgaaggccaccgag atgtgtcctaagagcgaggacgtatggctggaggccgcgcgcctgcagcccggcgactcg gccaaggcggtggtggccaacgccgtgaggcaccttccgcagtcagtgcgcacttggatc cgtgccgccgacctcgagaccgatctcaaggccaagaagcgagtcctgcgcaaagcccta gagcaggtgcccaactcagtgcggctgtggaaggcggctgtggaactcgaggagccggac gatgcgcgaatcctgctgagccgtgccgtcgagtgctgccccaccagcgtggagctgtgg ctagcgctggcacggctcgagtcgtatgagaatgcacgtaaggtgttgaacaaggctcgt gagaacatccccaccgaccggcacatctggattacggccgccaagctggaggaggccaac ggcaacacggccatggtggagaagattgtggaccgcgcaatcacctcgctgcgtgccaat ggtgtcgagataaatcgcgagcactggatccaggatgcggaggagtgcgataaggccggc agcgtaaccacatgccaagcggtgatccgagccgtcatcggcattggagtggaggaggag gatcgcaaacacacgtggatggaggatgcggacagttgtgtgtcacacggggcgtgtgag tgcgcgcgggccatctacgcgttcgcgctgcaggtgttccccagcaagaaaagtgtgtgg ctgagagccgcgtacttcgagaagaaccacggcacccgggagtctttggaggccttactg cagcgcgccgtcgctcactgccccaaggccgaggtcctatggctcatgggcgccaaatcc aagtggatggccggagacgtccccgcagcccgcagcattctggcgcttgccttccaggca aaccccaacagcgaggagatctggctggctgccgtgaagcttgagtctgagaacaatgag gacgagcgagcgcgacgactgctcgccaaggctcggagtagcgctcctactgcccgggtg ttcatgaaatcggtgaagcttgagtgggttctgggtgagatcccacgagcgaaggagctg tctgaggaggcgttgcgccactatgaggatttccccaagctgtggatgatgaaggggcag attgaggagcagctgcagctcaacgacaaggctcgcgatgcctacagccaggggctcaag aagtgcccccactcggtagcgctgtggctgctgctgtcgaggctggaggagcacgtgggg cagctgacgcgagcgcgcgccatccttgagaaagcacggctcaagaacccacagaatccc gagctgtggctggagtctgtacggctcgagtaccgcgcgggactgaagaacattgccagc acactcatggccaaggccatgcaggagtgccccagctcgggaatcctctgggctgaagct attttcctggaggcacggccacagcgcaagacaaagagcgtggacgccctcaagaagtgc gagcacgacccccatgtgctgcttgcagtcgccaagctgttctggagtgagcggaagatc tccaaagctcgcgagtggttccatcggacggttaagatcgaccccgacctgggtgatgcc tgggcagtcttctacaagtttgagctgcagcacgggagcaaggagcaacaggaggatgtg cgcaagcggtgcgagaatgcagagccacggcatggcgagctgtggtgcgcagtatcgaag gacatcctgcactggcgcaagaaaaccggcgagatcttggcacaggttgcctccagcatc aagaacacgttctga

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