Petromyzon marinus (sea lamprey): 116945130
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Entry
116945130 CDS
T09614
Symbol
WDR18
Name
(RefSeq) WD repeat-containing protein 18
KO
K14829
pre-rRNA-processing protein IPI3
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pmrn03009
]
116945130 (WDR18)
Ribosome biogenesis [BR:
pmrn03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
116945130 (WDR18)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
EIF3I
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_SPT8
Beta-prop_RIG_2nd
Beta-prop_VPS8
WD40_alt
Beta-prop_Nup120_160
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
116945130
NCBI-ProteinID:
XP_032815222
UniProt:
A0AAJ7TEP9
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Position
1:complement(14032887..14042085)
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AA seq
435 aa
AA seq
DB search
MAGTVVPAEVLVCAGADESAPGGGGCGAWDARSGASLASYRGGGAAARTLCLAGGRHLLG
AQRGKSYVNAWDAGRKQEQLQQKLVCPGPVSCLAASPDGLHLVAGIAQTLYLWEMGGGSL
LAVLSRHYQDVSCVCFSDDGSHFVSGGRDNLALVWNVGSVVQTGSAEPRHVWSQHTLPIT
DLQCGAGGPLARIATASLDQTVKLWELASGRLLLSVLLSVGLTALALDPAEYHVFCGGVD
GAIYRISLYNTNHERTLRVNEDDEEAVFRGHTGEVRCLCVTMDGSLLVSGSQDHKVCVWD
VASRQCLRTITMKGPVTNALLVPPLPGLVDSEPRPALTLPRLARHLAGAGDDGAGEGGAV
TVRSARSRHMGAQERTLLQELTQLRDAMQHGIETDGLADPEGQRLLASELQEEVHRLRTA
NTDLYKFASTQLHPV
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atggcggggacggtcgtgccggcagaggtgctcgtgtgcgccggggcggacgagtcggcg
cccggcggcggaggctgcggggcgtgggacgcgcgatcgggcgcctcgctcgcctcgtac
cgcggcggcggggcggcggcgcggactctgtgcctcgcgggaggacgccacttgctgggc
gcgcagcgcggcaagagctacgtgaacgcgtgggacgcggggcgcaagcaggagcagctg
cagcagaagcttgtgtgcccgggccccgtgtcgtgcctcgccgcctccccggacgggctg
cacctggtggccggcattgcgcagacgctctacctgtgggagatgggcgggggctccctt
ctcgccgtgctgtcgcgccactaccaggacgtgtcgtgcgtctgcttctctgacgacgga
agccacttcgtgtcggggggcagagacaatctggcgctcgtgtggaacgtgggcagtgtg
gtgcagacaggcagtgcggagccgcgccacgtgtggtcccagcacacgctgcccatcaca
gacttacagtgtggcgccggggggccgctggcccgcattgccaccgcctctctcgaccag
accgtcaagctgtgggagctggcatcaggccgcctgctgctgtcggtgctgctttccgtg
gggctcacggcgctggcgcttgacccggctgagtaccatgtgttctgcggtggcgtggac
ggtgcaatctaccgcatcagcctctacaacacgaaccacgagcggactctgcgggtgaac
gaggacgacgaggaggcggtgtttcgaggacacaccggtgaggtgcgctgtctgtgcgtc
accatggacgggtccctgctggtgtcaggctcccaggaccacaaggtgtgcgtgtgggac
gtggcgagccggcagtgcctccgcactattaccatgaagggcccagttaccaatgcgctg
ctcgtgccgccgctgccgggcctcgtggacagcgagccgaggccggcgctcactctgcct
cggctggcgcggcatctggcgggtgccggcgatgacggtgctggggagggcggcgccgta
accgtgaggtcggcgaggtcgcggcacatgggagcgcaggaacgcacgctcctgcaggaa
ctgacgcagctgcgcgatgccatgcaacatggaatcgagacggatgggctggcagacccc
gagggtcagcgccttctcgcctcggagctccaggaggaggtgcaccgcctgcgcacagcc
aacaccgacctctacaaattcgccagcacccaactccacccagtctga
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