KEGG   Petromyzon marinus (sea lamprey): 116945130
Entry
116945130         CDS       T09614                                 
Symbol
WDR18
Name
(RefSeq) WD repeat-containing protein 18
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
pmrn  Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:pmrn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pmrn03009]
    116945130 (WDR18)
Ribosome biogenesis [BR:pmrn03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    116945130 (WDR18)
SSDB
Motif
Pfam: WD40 WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_TEP1_2nd WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd EIF3I NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st WD40_MABP1-WDR62_2nd Beta-prop_SCAP Beta-prop_WDR75_1st Beta-prop_IFT140_1st WDR90_beta-prop_4th ANAPC4_WD40 Beta-prop_SPT8 Beta-prop_RIG_2nd Beta-prop_VPS8 WD40_alt Beta-prop_Nup120_160 Beta-prop_IP5PC_F
Other DBs
NCBI-GeneID: 116945130
NCBI-ProteinID: XP_032815222
UniProt: A0AAJ7TEP9
LinkDB
Position
1:complement(14032887..14042085)
AA seq 435 aa
MAGTVVPAEVLVCAGADESAPGGGGCGAWDARSGASLASYRGGGAAARTLCLAGGRHLLG
AQRGKSYVNAWDAGRKQEQLQQKLVCPGPVSCLAASPDGLHLVAGIAQTLYLWEMGGGSL
LAVLSRHYQDVSCVCFSDDGSHFVSGGRDNLALVWNVGSVVQTGSAEPRHVWSQHTLPIT
DLQCGAGGPLARIATASLDQTVKLWELASGRLLLSVLLSVGLTALALDPAEYHVFCGGVD
GAIYRISLYNTNHERTLRVNEDDEEAVFRGHTGEVRCLCVTMDGSLLVSGSQDHKVCVWD
VASRQCLRTITMKGPVTNALLVPPLPGLVDSEPRPALTLPRLARHLAGAGDDGAGEGGAV
TVRSARSRHMGAQERTLLQELTQLRDAMQHGIETDGLADPEGQRLLASELQEEVHRLRTA
NTDLYKFASTQLHPV
NT seq 1308 nt   +upstreamnt  +downstreamnt
atggcggggacggtcgtgccggcagaggtgctcgtgtgcgccggggcggacgagtcggcg
cccggcggcggaggctgcggggcgtgggacgcgcgatcgggcgcctcgctcgcctcgtac
cgcggcggcggggcggcggcgcggactctgtgcctcgcgggaggacgccacttgctgggc
gcgcagcgcggcaagagctacgtgaacgcgtgggacgcggggcgcaagcaggagcagctg
cagcagaagcttgtgtgcccgggccccgtgtcgtgcctcgccgcctccccggacgggctg
cacctggtggccggcattgcgcagacgctctacctgtgggagatgggcgggggctccctt
ctcgccgtgctgtcgcgccactaccaggacgtgtcgtgcgtctgcttctctgacgacgga
agccacttcgtgtcggggggcagagacaatctggcgctcgtgtggaacgtgggcagtgtg
gtgcagacaggcagtgcggagccgcgccacgtgtggtcccagcacacgctgcccatcaca
gacttacagtgtggcgccggggggccgctggcccgcattgccaccgcctctctcgaccag
accgtcaagctgtgggagctggcatcaggccgcctgctgctgtcggtgctgctttccgtg
gggctcacggcgctggcgcttgacccggctgagtaccatgtgttctgcggtggcgtggac
ggtgcaatctaccgcatcagcctctacaacacgaaccacgagcggactctgcgggtgaac
gaggacgacgaggaggcggtgtttcgaggacacaccggtgaggtgcgctgtctgtgcgtc
accatggacgggtccctgctggtgtcaggctcccaggaccacaaggtgtgcgtgtgggac
gtggcgagccggcagtgcctccgcactattaccatgaagggcccagttaccaatgcgctg
ctcgtgccgccgctgccgggcctcgtggacagcgagccgaggccggcgctcactctgcct
cggctggcgcggcatctggcgggtgccggcgatgacggtgctggggagggcggcgccgta
accgtgaggtcggcgaggtcgcggcacatgggagcgcaggaacgcacgctcctgcaggaa
ctgacgcagctgcgcgatgccatgcaacatggaatcgagacggatgggctggcagacccc
gagggtcagcgccttctcgcctcggagctccaggaggaggtgcaccgcctgcgcacagcc
aacaccgacctctacaaattcgccagcacccaactccacccagtctga

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