Petromyzon marinus (sea lamprey): 116945222
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Entry
116945222 CDS
T09614
Symbol
VCPIP1
Name
(RefSeq) deubiquitinating protein VCIP135 isoform X1
KO
K11861
deubiquitinating protein VCIP135 [EC:
3.4.19.12
]
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pmrn01002
]
116945222 (VCPIP1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmrn04121
]
116945222 (VCPIP1)
Enzymes [BR:
pmrn01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
116945222 (VCPIP1)
Peptidases and inhibitors [BR:
pmrn01002
]
Cysteine peptidases
Family C64
116945222 (VCPIP1)
Ubiquitin system [BR:
pmrn04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
116945222 (VCPIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VCIP135_N
OTU
OTU1_UBXL
ubiquitin
Motif
Other DBs
NCBI-GeneID:
116945222
NCBI-ProteinID:
XP_032815416
UniProt:
A0AAJ7TEI8
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All DBs
Position
23:complement(5350233..5386768)
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AA seq
1378 aa
AA seq
DB search
MLPGSKKAKDGPRLLAASCPDERCGARLLLPAAGGPAQCSACGRSFEVEAARGPAGLSRE
QATLQNLLRNFLLTGGSGTGALGGRKPIAPLARVDGLCNYQCKLLSPILTAHGMDRATGR
ARLLSDMGQGSTFDCAVLGDRGFRIEPENLAVEGYGRDRSGSMVYLRETLRLIAVANGDE
ERLVPIHAEMDGHCLVHAVSRALVGWELFWHALRQNLKAHFRDNLERYKELFREFVDTCE
WQDIVSECDPAFVPPEGVPLGLRNIHIFGLANVLRRPILLLDSWEGMQSPGDYSATFLPG
LVEERLCRGHDGRLNEPLCVAWSSADRNHYIPLVGVLGRPPPRLPGLVVPKAWGVPQALL
RRYVDFDEDGSCTVGGSRPLRGRYVRRLVVAMEEVYAKRHGGLCPSLVADARHYVYRRPD
EADVAGATALALRERRLYRCLSCEALLEFDVPAEWLAPGGRLYELARRSHGLLRTDRSYS
FPHFGVVCSYVDGEAEGGGGGGGGGGGCLEADYGESELPRCAWCGASAVRKVVSGDGAVL
YKNGDRTRTASGGGTGSVGRCDCGFKHFWDGGEYDRLPEELPVTLEWGGSTVREIVYWFQ
HESDASLNSNAYAEATKLVAKHFPGEFGSELLVQKVVNAILRQTAKRTADGQQRQPVSLS
DGSGQRSCGALGDVGVERTEDGQPEEGSMAVSCESPRMQADAEQAPPSKIILTGPKGRTL
HREELTMSQAEQDVARRISDKAPSAQRKATDRIKQQQQQQNHQQQKGKETKEPLPTEVTT
TAVLDEVPHGGASSGKTAVRPEPEKKIRAATADGRQATLTLLPSTTFAELRASVEREFGI
PVTEQRIRFGFPPRELSAPAPGDEDRPLPLQHGERISVESLAPAGDSQAPRSGPVGQAER
RDVTAGGGPARPPSPAGRARPAGSADELDNRENIDLEMSSLHLLVTLTGQDMWSYVKKMP
YLFQQGGVFYKKVRNDIGLVDGKHVTLPELPGRTLVYNGDADRLELCLEPGGHFPVGPEL
DRDVAAALETRARHDRTPAWSRSREGSPSHHGGQGGGSSGSGGMKLGSGGAIVRRSEQQH
NVHAFHGKGHSLVSAPAHSPPTQQAPGALSSRATGSGGGSLSSSSSPARAPRESEGRAVR
VGPGFTTHHTDATSQADGSATTGSSISQAAIGEQRQRLLEMVSAIQASVEKHMMNRDEQI
PPGSRRSAAPRSPAQASATGAPFDNSGGGGGGGGGDTSVRQERTERKSGNLTQPEVLNKL
SEPLGKAATQVGEEEDDDDDDDHDHDDNDDEVAEVESDGKGCSDGRDGESSLAGVAVETP
MEVMDPHPAVAVAEEEEEEEVVTRPRQTERKMVADEEPEEMESQDAGSAAVPAHMEFT
NT seq
4137 nt
NT seq
+upstream
nt +downstream
nt
atgctgcccggcagcaagaaggcgaaggacgggcccaggctgctggccgcgagctgcccg
gacgagcgctgcggtgcccgcctgctgctgcccgcggcaggaggccccgcgcagtgctcg
gcgtgcggccgcagcttcgaggtggaggcggcccggggccccgcgggcctctcccgcgag
caggccaccctccagaacctcctccgcaacttcctgctgacgggtggcagcggcacgggc
gcgctgggcggcaggaagcccatcgccccgctcgcgcgcgtcgacgggctctgcaactac
cagtgcaagctgctgtcgcccatcctgacggcgcacggcatggaccgcgcgacggggcgc
gcccgcctgctcagcgacatgggccagggcagcacgttcgactgcgccgtgctgggcgac
cgcggcttccggatcgagccggagaacctggccgtggagggatacggcagggaccgctcc
ggcagcatggtgtacctgcgtgagactcttcgtttgatcgctgttgctaacggggacgag
gagcggctggtgcccatccacgcggagatggacggacactgcctggtgcacgcagtgtca
cgtgcactcgtcggctgggagctcttctggcacgcgctccggcagaacctcaaggcgcac
ttccgggacaacctggagcgctacaaggagctgttccgcgagtttgtggacacgtgcgag
tggcaggacatcgtgagcgagtgcgacccggcgtttgttccgcccgagggagtgcccctg
ggcctgcgcaatatccatatttttggactcgcaaacgtgctgcgacggccgatacttctg
ctcgactcctgggagggcatgcagagccccggggactactctgccaccttcctgcccggc
ctcgtcgaagagcggctgtgccgtggccacgacggccggctgaacgagccgctgtgcgtg
gcgtggagcagcgccgaccgcaaccactacatcccgctcgtgggcgtgctgggccgccca
ccgccccgcctgccgggcctcgtcgtgcccaaggcgtggggcgtgccgcaggccctgctg
cgccgctacgtcgacttcgacgaggacggctcgtgcaccgtgggcggcagccgccctctc
cggggtcgctacgtgcgtcgcctcgtcgtcgccatggaggaggtgtacgccaagcggcac
ggcggcctctgcccgtcgctcgtggccgacgcacgccactacgtgtaccggcggcccgac
gaggcggacgtggcaggagcgacagcgctggcgctgcgcgagcgccgcctctaccgttgc
ctgtcgtgcgaggcgctgctggagttcgacgtgcccgcggagtggctggcgcccggcgga
cggctgtacgagctggcgcgacgctcgcacgggctgctgcgcaccgaccgctcctacagc
tttccgcatttcggcgtcgtgtgctcgtacgtggacggggaggcggagggcggcggcggc
ggcggcggcggcggcggcggctgcctggaagccgactacggcgagagcgagctgccgcgc
tgcgcctggtgcggggccagtgccgtgcgtaaggtggtgtcgggcgacggtgcggtgctc
tacaagaacggcgaccgcacgcggacggcttccggcggcggcaccggcagcgtgggccgc
tgcgactgcggcttcaaacacttctgggacggcggcgagtacgacaggctgcccgaggag
ctgcccgtgacgctggagtggggcggaagcacggtgcgcgagatcgtctactggttccag
catgagagtgacgcgtcgctgaacagcaatgcctacgcggaggcgaccaagctcgtggcc
aagcactttcccggcgagttcggcagcgagctgctcgtgcagaaggttgtcaatgccatc
ctgcggcagaccgccaagaggaccgctgacgggcagcagcggcagcccgtgtcgctgagc
gatggcagtggtcaacggagctgcggggcgttgggcgatgtcggagtggaacggactgag
gatgggcagcccgaggagggcagcatggccgtcagctgcgagagccctagaatgcaagcg
gatgcggagcaagcaccgccatccaagatcatcctgacggggcctaaggggcggacgctg
caccgggaggagctgacgatgagccaagcggagcaggacgtggccaggagaatatcggac
aaggctccctctgctcagcgcaaagctactgaccgtatcaagcagcagcagcagcagcag
aatcatcagcagcaaaaaggcaaggagactaaggagccattgcccacggaggtcacgacc
acggcggtgctggacgaagttcctcatggcggtgcgagttccggaaaaacggcggtccgc
ccggaaccggagaagaaaatccgggcggccacggcggacgggagacaagcgacgctcacg
ctgcttcccagcaccacattcgccgagctgcgcgccagcgtggagcgggagttcggcatc
cccgtgacggagcagcgcatccgattcggtttcccgccccgcgagctgagcgcgccggct
ccgggcgacgaggacaggccgctgccactgcagcacggcgagcgcatctccgtggagtcc
ctcgcgccagcgggtgactcgcaggccccccggagcggccccgtcgggcaggccgagcgg
cgcgacgtcaccgcgggcgggggccccgctcgtccgccctcgccggccggcagggccagg
ccggctgggtcggccgatgagctcgacaatcgggaaaacatcgacctggaaatgtcgtcg
ttgcacctactcgtcaccctcaccggccaggacatgtggtcgtacgtgaagaagatgcct
tacctctttcagcaaggaggggttttctacaagaaagtgcggaatgacattgggctggtc
gatggcaagcacgtgacgctgccggagctgccggggcggaccctcgtgtacaacggcgac
gccgaccgcctggagctatgcctggagcccggcggccacttccccgtggggcccgagctg
gaccgtgacgtcgcggccgccctggagacgcgagcgcgccacgaccgcacgcccgcgtgg
agcaggagtcgcgagggtagcccttcgcaccacggaggacagggcggcgggagtagcggc
agcggcggcatgaagcttggcagcggcggagccattgttcgccgctcggagcagcagcac
aacgtgcacgccttccacggcaaggggcacagcctggtgtcggcaccggcgcattctccc
ccaacgcagcaagcgcccggcgcgttgtcgtccagagcgactggcagtggagggggctcc
ttatcctcgtcatcgtcgcccgcacgagccccaagggagtcggaggggcgcgcggtccgg
gtcggcccaggcttcacaacgcaccacaccgacgcgacctcacaggcggacggtagcgcc
acgaccggcagctccatctcccaggccgccatcggggagcagcggcagcgcctgctcgag
atggtctccgcgatccaggcgtcggtagagaagcacatgatgaacagggacgagcaaatt
ccaccgggctctcggcggtcagccgctcctcgttctccggctcaggctagcgcgaccggc
gctcccttcgacaacagcggcggcggcggcggcggcggcggcggcgacacgagcgtgcgg
caggagcgcacggagcgaaaatcgggaaacctcacccagccggaagttctcaacaaactg
tcggagcctttgggaaaagcagccactcaagttggtgaagaagaagacgacgacgacgac
gacgaccacgaccacgacgataacgacgacgaagtcgctgaagttgaaagcgatggtaaa
ggttgcagcgacgggcgagacggcgaaagttcgctcgccggcgtggcggtggagactccg
atggaggtgatggacccccacccggcggtggcggtggcagaggaggaggaggaggaggag
gtggtgacaagacccaggcagacggagcggaagatggtggcggatgaggaaccggaggag
atggagagccaggatgcaggcagtgccgctgtgccagcgcacatggaattcacgtaa
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