Petromyzon marinus (sea lamprey): 116945234
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Entry
116945234 CDS
T09614
Symbol
WASHC5
Name
(RefSeq) WASH complex subunit 5
KO
K18464
WASH complex subunit strumpellin
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116945234 (WASHC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmrn04131
]
116945234 (WASHC5)
Membrane trafficking [BR:
pmrn04131
]
Protein recycling
Others
WASH complex
116945234 (WASHC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Strumpellin
DUF3106
Motif
Other DBs
NCBI-GeneID:
116945234
NCBI-ProteinID:
XP_032815444
UniProt:
A0AAJ7TDJ9
LinkDB
All DBs
Position
23:complement(6281692..6320717)
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AA seq
1161 aa
AA seq
DB search
MVDFLAENNLCGQAILRVVSRGNAIIAELLRLAEFVPPVFRLRERAEIAKYGELVCDFSY
FKTSELLDSRIDAKPELQDLDEEIRENYIEILTRFYLAFESVHKYIVDLNRYLEDLFEGV
YIQQTLESVLLNEDGKQLMCEALYLYGVMLLVIDQRIEGEVRERMLVSYYRYSGARSSAD
SNIDDVCKLLRSTGFSSAPGSRRPVGYPESYFQRVPVSETFISMLIGRLRSDDIYNQVSA
YPLPEHRSTALATQAAMLYVLLYLQPSTLHTQQAKMREIVDKYFPDNWVISVYMGMTVNL
MEAWEPYKAAKTALNNTLEPGNIREQACRHARKLDGVMKEVRQYLTEGVLMQEFVLDSIP
KLLHCLRDCNVSLRWAMLHAAESAYDSSNKRSRQVREQVMADCKYRPDTMFQLLLNTAQL
EFQLKEMFRLMLAEKQLKWESFRSEAAERMIEMAEVFSGTKPLTRVEKNENLQAWFREMA
KQISSLGSEDATAAGRKTVQLIQALEEVQVFHQLDTNMQVCQFLADTRRFLHQMIRTINI
KEEVLISMQIIGDLSYAWEIIDSYTRIMQEGIKKDPFMVTRLRATFLKLASALDLPLLRI
NQANSPDLMSVSQYYSGELVSYVRKVLQIIPETMFGLLAQVIQLQTHNILEVPTRLDKDK
LRECAQLEARYQVAKSTHAISVFTEGILMMKTTLVGIIKVDPKQLLEDGIRKEMVKQVAA
ALHTGLTFNPKAKSSELMPKLHDLAARMDGFRRSFEYIQDYVSVYGLKIWQEEVSRIINY
NVEQECNSFLRTKVQDWQSIYQSTHIPIPKFQPTDESATFIGRLCREILRITDPKTTSYV
DQLSIWYDGRTKQELTNSRLFSEVQKSLGTFGLTGLDRLLSFMIVRELQNAVEYLQKNVL
KDKVLMDSFTAFMKTANPIKGILANASKVYSSATSKSQKIWPGYMDIILKVGQLQLLRRQ
MAHELSYSCKLDSKTLFGALMTLNKALLADVQAHYAEPSRPYPREDNPLLFELTSYLEAA
GINNPLNKIYITTKRLPHFPLINFLCVIAHLPKLQYSKAVGMVSRRAGDGLDWPPMVVGM
LTLLKQFHSRNTEQFLALLGQLVRSLLEQCTTSQKSPEMPSDVVGTLVFLEDFVHYTQLT
RQVIEAHVPSYILDEFRHVAQ
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atggtggacttcctcgccgagaataacctgtgcgggcaggcgatcctacgggttgtgtct
cgcgggaacgccatcatcgccgagctgctgaggctcgccgagttcgtgccacccgtgttc
cgcctgcgggagcgcgcggagatcgccaaatacggggagctcgtgtgcgacttctcctac
ttcaagaccagcgagctgttggatagccgaatagatgccaaacctgagctgcaagacctg
gacgaggagatccgagagaattacatcgaaatcctcacacgcttctacttggcctttgag
agtgtgcacaagtacattgtggatctcaacagatacctggaggatttgtttgaaggggtg
tacattcagcaaaccctggagagtgtgcttctcaatgaggatggaaagcaactcatgtgt
gaagcactctacttgtacggagtgatgttgctggtgattgatcaacggatcgagggtgag
gtgcgggaaagaatgctcgtctcctactacagatacagcggggctcgctcctcggccgac
tcgaacatcgacgatgtctgcaagctgctgcgcagcacgggattttcgtcggcgcccggc
tcgcgccgcccggtcgggtaccccgagagctacttccagcgcgtgcccgtgagcgagacg
ttcatcagcatgctcattggacgcctgcgctctgacgacatctacaaccaggtgtcggcg
tatcccttgccagagcatcggagcacggcgcttgccacgcaggccgccatgctctatgtg
ctgctgtacctgcagccctcgacgctgcacacgcaacaggccaagatgcgcgagatcgtc
gacaagtacttccccgacaactgggtgatcagcgtgtacatgggcatgactgtgaacctc
atggaggcctgggagccatacaaagcggccaagactgcgctcaacaacaccctggagccg
gggaacattcgcgagcaggcatgccgccacgcgcgcaagctggacggcgtgatgaaggag
gtgaggcagtacctgacggagggcgtgctcatgcaggagttcgtcctcgactccatcccc
aagctgctgcactgcctgcgcgactgcaacgtcagcttgcgctgggccatgctgcacgcg
gcggagtcagcttatgattccagcaataagaggtcccggcaggtgcgagagcaggtgatg
gctgactgcaagtaccgaccggacaccatgttccagctgctgctcaacacggctcagctg
gagtttcagctcaaggagatgttccggctgatgctggcggagaaacagctcaagtgggag
agcttccggagcgaggcagcggagaggatgattgagatggccgaggtgttctccggcacc
aagccgctcacgcgcgtcgagaagaacgaaaacctccaggcgtggttccgggagatggcc
aagcagatctcgtctctgggatcggaggatgcgactgcggcggggcgcaagactgtgcag
ctgattcaggcgctggaggaggtccaggtgttccaccagctggacaccaacatgcaggtg
tgccaattcctggcggacacgcgtcgcttcctgcaccagatgattcgcaccatcaacatc
aaggaggaggtgcttatcagcatgcagatcatcggcgacctctcctatgcctgggaaatc
attgacagctatactcgcattatgcaggagggcatcaagaaggacccctttatggtcacg
aggcttcgagccaccttcctcaagctggcatctgcactggacctgcccctgctgaggatc
aaccaggccaacagcccagatctcatgagtgtgtcccagtactactcgggcgagcttgtc
tcctacgtacgcaaggtgttgcagataatcccggagacaatgtttggcctcctggcccag
gtgatccagctgcagacgcacaacattttggaggttccgacgcgtctcgacaaggacaaa
ctgcgcgagtgcgcacagctggaggctcgctaccaggtggccaagtcgacacatgccatt
tccgtgttcaccgaagggatcctgatgatgaaaaccacattggtgggcatcataaaggtg
gatcccaagcagctgctggaggacggcatcaggaaggagatggtgaagcaggtggcggcc
gcactgcacactggcctcacgttcaaccccaaggccaagtcgagcgagctgatgcccaaa
ctacacgacttggccgcccgcatggatggcttccgccgctcgtttgagtacatccaggat
tacgtgagcgtgtacggcctcaagatctggcaggaggaggtgtcgcgcatcatcaactac
aacgtggagcaggagtgcaacagcttcctgcgcaccaaggtacaggattggcagagcatc
taccagtcgactcacatccccatccccaagtttcagcccacggatgaatcggccaccttc
atcggacgcctgtgccgtgaaatccttcgcatcacagaccccaaaacgacgtcctacgtg
gatcagttgagcatctggtacgatggtcgcacaaagcaggagctcacaaacagccgcctc
ttctccgaggtccagaagagccttggaaccttcggtctcactgggctcgaccgtctgctg
agctttatgattgttcgggagctgcagaatgcggtcgagtacctgcagaagaatgtgctg
aaggataaggtgctcatggactcgtttactgcgttcatgaagactgccaaccccatcaag
ggcatacttgccaacgcaagcaaagtgtattcatccgccacatcaaagtcacagaaaatc
tggcctggctacatggacatcatcctcaaggttgggcagcttcagctgctaaggcgacag
atggctcatgagctcagctactcctgcaaactcgactccaagactctatttggagcactt
atgacacttaacaaggccctgctggcagacgtgcaggcccactacgccgagccgagccgc
ccgtacccacgagaggacaaccccctgctcttcgagctcacctcttacctggaggcggcg
gggataaacaaccctctaaacaagatttacatcacaaccaagcggctgccgcatttccca
ctcattaacttcctgtgcgtcattgcgcatctacccaagctacagtacagcaaggcagtg
ggcatggtgagcaggcgggcgggtgatgggctggactggccgcccatggtggtgggaatg
ctcacattgctcaagcagttccactcgcgcaacaccgagcagttcctggcactgctgggc
cagttagtgcgctccttactggagcagtgcacgaccagccaaaaatctccagagatgcct
tcggatgtggttggaaccctcgtgttcctagaagattttgtgcactacacacagctcacg
agacaggtgatcgaagcccacgtcccgagctacatcctggacgagttcaggcatgttgct
cagtag
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integrated database retrieval system
