Petromyzon marinus (sea lamprey): 116945287
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Entry
116945287 CDS
T09614
Symbol
TRAPPC12
Name
(RefSeq) trafficking protein particle complex subunit 12
KO
K20309
trafficking protein particle complex subunit 12
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmrn04131
]
116945287 (TRAPPC12)
Membrane trafficking [BR:
pmrn04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
116945287 (TRAPPC12)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_12
TPR_19
TPR_8
TPR_17
TPR_16
TPR_9
Coatomer_E
ARM_TT21_N
TPR_10
RPN7
Iml2-TPR_39
ANAPC3
TPR_MalT
TPR_11
ARM_TT21_2nd
SIX1_SD
Motif
Other DBs
NCBI-GeneID:
116945287
NCBI-ProteinID:
XP_032815581
UniProt:
A0AAJ7TEW0
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Position
23:13634117..13654474
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AA seq
770 aa
AA seq
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MDDLEHKKEDAMMASNQDTGKEESEQDGESLPPATDTIDLGPEENDDEDVAEMSALLGDT
MMESVLISDSPSNSEDDGTAESATLQTSDKLENGAETELRVGFQPDPKRDTVVELACVAS
EMHAATGTSPPRTPIDSIEGTNNDVEIGEADIAQSSQSAATVAALDQLSPEEEDSLPVCT
IFSKAPATKVHAREQQAVKEDGFQSQMVKSASFTACVEPSNPKAAGADVIHPSPSLSKFF
AEEPSTTGAEFFDSFTSASVITSNNPNVDSQAPPSGLTSLSLSPSESQKPFAESEVSSHT
STEAPPSQAAGGLESPQPFSVFAAGEDAFVSALSVSESDRRHDAWLPSEETRRTLIAVAT
QQYGNMFVERERLTMPGLKADAPQEDPVKDLLHKCVGEQEAAKRKVLTVDSVEPSLAGLK
QLINSWNWRAAVELTGRLLTAHGQGHGKCGQPSSHTTDSIQLWFVRLALLVKLRLFGGCD
AELEPFGNLDHPDLYYEYYPHVYPARRGSMVPFSLRILHAELPQYLGRPQETLDRLHQVG
VICAKILSNLENGLAEDGSMINLSTENRQASVQLWRSRVARVHYSTANCLLLMKDYCLAV
NTYEAIIPIQPEQELQLLNNIGKILLQVGDLAAAQKYFQRVESICENKEGVQHKTMVLMN
RAFALLAENNFPDAYRCFQEVSKLDPTNAVANNNAAVCLLYMGKLKESLRQLEELIQKEP
QRYLHESVLFNLSTMYELESSRSTAKKQGLLATVAPHSGDSFGVQCLKML
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atggacgaccttgagcataaaaaggaagatgcgatgatggcttcaaatcaagatacagga
aaagaggagtctgagcaggatggggaaagtcttcctccagcaacagacaccattgacctg
gggccagaggagaatgatgatgaggacgtggctgagatgagcgctctcctcggtgacacg
atgatggagagtgttctcatctccgactcccccagtaacagtgaggatgacggcacagcc
gagagtgccactttgcagactagcgacaaactagaaaacggcgcagagacggagcttcga
gtgggcttccaaccggaccccaaaagggacacggtggtcgagctggcatgcgtcgcctcc
gagatgcacgcggcaacagggacgtcgccaccacgcaccccgatcgactctatcgagggc
acgaacaacgacgtcgaaatcggagaagcggacattgcgcaatcgtcgcaaagcgccgct
acagtggcagcgctggaccagttgagccccgaggaggaggactctctgcctgtgtgcacc
atattcagcaaggcgccggcaaccaaggtgcacgcacgagagcagcaagccgtgaaggag
gacggtttccagagccagatggttaagtcggccagcttcacggcctgtgtcgagccgagc
aatcctaaagcagctggtgcagatgtcattcatccgagtccgagtctcagcaaattcttt
gcagaggaaccctctactaccggggcagagtttttcgattcctttacgtctgcgtcggtc
atcacttcgaacaacccgaacgttgattctcaggcaccaccttcgggcttgacgtccctc
tctttgtctccgtctgagagccagaagccgtttgctgaaagcgaagtttcaagtcacaca
tcaaccgaagcacccccttcacaagcagcaggtggcttggagtctcctcagccgttctcg
gtgttcgctgcaggagaggacgcgtttgtgtcggccctgagcgtgagcgagtcggaccgg
aggcacgacgcatggcttccctcggaggagacgcgccgcacactgattgcagtggccacc
caacagtacgggaacatgtttgttgaacgagagcgcctcaccatgccgggactcaaagca
gacgcgccacaggaggaccctgtgaaagacctgctccacaagtgcgtgggggagcaggag
gcagccaagaggaaagtgctcacggtggactctgtggagccgtctttggctggactcaag
cagctgattaattcgtggaactggcgtgcggcggtggagctcacgggcaggctgctcacc
gcccatgggcagggccacggcaagtgtggccagccgagcagccataccaccgactccatc
cagctctggttcgtgcgtctcgccctcctggtgaaactgcggctcttcggcggctgtgac
gcggagcttgagccgttcggcaacttggaccaccctgacctgtactacgagtactacccc
catgtgtacccagcacgcagagggtccatggtaccgttctccttgaggatccttcatgcc
gagctgcctcagtatctcggtcggccccaggaaaccctggatcgtctgcatcaggttgga
gtcatttgtgcaaagattctaagcaacctagagaatggactcgcagaggacgggagcatg
atcaacctctccacagaaaatcggcaagcctccgtgcagctgtggcggtcgcgcgtggct
cgcgtgcactactccaccgctaactgcctgctgctcatgaaggattactgcttggctgtg
aacacgtatgaagccatcatccccatccagccagagcaggagcttcagctcctcaataac
attggaaagatcctgctgcaggtgggagatctcgcggcggcacaaaagtactttcagaga
gtggagtccatttgcgagaataaggaaggcgtgcagcataagaccatggtgcttatgaac
agagcattcgcactcctggcagaaaataatttcccagatgcttaccgctgcttccaggag
gtctccaagttggatcccacgaatgcggtggccaacaacaacgcggccgtatgcctgctc
tacatggggaagctgaaggagtcgctgcgacagctggaggagctcattcagaaggagcct
cagcgctacctccacgagagcgtgctcttcaacctgtccaccatgtacgagctcgaatcg
tcacgcagcacggccaagaagcaaggcctgctcgcgactgtggccccacacagcggggac
agctttggtgtgcagtgcctcaaaatgctgtga
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