Petromyzon marinus (sea lamprey): 116945580
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Entry
116945580 CDS
T09614
Name
(RefSeq) caprin-1-like isoform X1
KO
K18743
caprin-1
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmrn03019
]
116945580
Messenger RNA biogenesis [BR:
pmrn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
116945580
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caprin-1_C
Caprin-1_dimer
Motif
Other DBs
NCBI-GeneID:
116945580
NCBI-ProteinID:
XP_032815917
UniProt:
A0AAJ7WZW2
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All DBs
Position
24:complement(8992271..9016328)
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AA seq
774 aa
AA seq
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MEARRAVRMRGAMRRSTVAEAVAAPRGASQLPRQPPEDPALRAMWEQSVTIVQHKIRNLE
KKKSKLDDYKAKLNDGHALNQDQQEAVAKYMEVVSSLEFARDLLKTFASLNQDVQKVQKK
AARREHLLREEAEQKRLRLVLEVQYILDSLGDGEAARLDFLAGQNGAALLLTQEMAYLDD
LYKLVNPERVETTSFETQMEQASQHLWDLVEGKDKPVAGTTYKIIKEVIDRVRECSYFDN
IHTPQNGLQEAPSEEQDLASSPESEKEEKEIPLPPEPQPQPQLQQLQQQVPEIEPEPIEE
FENVCEVQPREFVNTHFLAAATKTDFIPKQTEEIPSWNSEPVEQRPMPVTEPSPVVEAQV
VPPAPAPAPQDPVLRQQHVQDLMARIQGTFDFMQDSLLDYEPPVDPAIVAAQPMAPVELL
EGSTMASAVDNRVNQSDIPQQSSNQMPLLSAAQLLPAPSSLLQSNPVPSLAVLATDAGAT
EQLGQIPMVCTAVSDAYVPAQPLYQSAPHIPDALPQQPTIDPTQCLPLASEQIPVAGKPL
SSGGINVNAAPFQSMQTVFNVNAPLPPETEVIKQQLPPSQPPYSTASYSTQPQTHQLSQP
GALAQLTLETDAFQTVVSSSYQAPQETLSTSAGQPQGGVGGGGGFSRQAQTFYNSRGMPR
GTARGMRSSTNGYRASNNYRGARGGPFNGANYEGFHVGYPGSANNYGQNSFAPRNYSMGF
HQQEGGYQTGYKRGGTGPAGPRGAPRGGGRGTSPLMKSRFKSPMTGSMTAQSVE
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgcggcgcgcagtgcgcatgcgcggggccatgaggaggagcacggtggccgag
gcggtggcggcgccgcgcggagcctcgcagctaccgcggcagccgcccgaggaccccgcg
ctcagggccatgtgggagcagagcgtcaccatcgtgcagcacaagatccgtaacttggag
aagaagaagtccaagttggatgattacaaagccaagcttaacgatggacatgctctcaac
caagaccagcaggaagccgttgctaagtatatggaggtcgtcagcagcctggaatttgcc
cgagacctactgaagacctttgcttcactcaaccaagatgtgcagaaggtgcagaagaag
gcggcgcggcgtgagcacctgctgcgcgaagaggccgagcagaagcgcttgcggctcgtg
ctggaggtgcagtacatcctcgacagcctaggcgacggggaggcagcacgcctcgacttc
ttggccggccagaacggtgccgctctgctcttgacccaggaaatggcctacctggacgac
ctctacaagctcgtcaaccctgagcgagtggagaccaccagctttgaaacccagatggag
caagcatcgcagcacttatgggatctggtggaagggaaggataaaccagttgcaggaact
acttacaaaatcataaaggaggtcatcgatcgggtccgtgaatgtagctacttcgataac
atccacacgccacagaatgggcttcaggaggcaccatcagaggaacaagaccttgcaagt
tctcccgaatcagaaaaagaggagaaagaaattccacttccacctgagcctcagccgcag
ccacagctgcagcagttgcagcagcaagtcccagaaattgaacctgaacccattgaggaa
tttgaaaatgtgtgtgaagtccagccacgtgagtttgtcaatacacatttcctggcagca
gcaaccaagacagacttcatccccaaacagacggaagagattccttcgtggaattccgag
cctgttgagcagcggcccatgcctgtgacggaaccctcaccggtcgtagaggcccaggtg
gtcccccccgctccagctcctgcccctcaagaccccgtgctccgccagcagcacgtccag
gaccttatggctcgcattcagggaacctttgatttcatgcaggattccctgctggattac
gagcctcctgtggaccctgcaattgtggcggctcagcccatggctcctgtggagctgctg
gaggggtctaccatggcatctgcagtcgataacagagtgaatcagtctgacattccccaa
cagtcttctaatcaaatgcccctcctatccgcagcacaactccttcctgccccctcttcc
cttctgcagtctaaccctgtccctagcttagctgtgctggccacagatgctggtgccact
gagcagctgggacagattcccatggtttgtacagcagtgagtgatgcgtacgttcccgca
cagccgctctaccagagcgcaccacacatccccgacgccctgccacagcagcccaccatc
gacccgacacagtgcttgcctctcgcttccgagcagatcccagtggctggaaagccgttg
agcagtggtggaattaacgtcaatgctgcacccttccaatcgatgcagacggtttttaat
gtgaacgccccactgccgcctgagacggaagtgatcaagcagcagctgccaccctcgcag
cccccatacagcaccgccagctacagcacgcagccccagacccaccagctgtcccagcca
ggagccctggcacagctgacattggagacagatgccttccaaactgtggtgagtagcagc
taccaggcgccccaggagaccctctcgacgtcggccggccagccccagggaggcgtgggt
ggggggggcggcttctcgaggcaggcgcagaccttctacaacagccgagggatgcccagg
ggcaccgcgcggggcatgcgcagcagcaccaacgggtaccgagcgtccaacaactatcgg
ggcgcccgcggaggccccttcaacggtgctaattacgaaggattccacgttggctatcca
ggatcggcaaacaattacggacaaaactccttcgcccctcgcaactacagcatgggcttc
caccagcaggagggaggctaccagacgggctacaagcgtggtggcacgggaccagcaggg
cctcgtggtgcgcctaggggcggaggccgtggcacttctcctctcatgaagtcgcgcttt
aagagtcccatgaccggctcgatgacagctcagtccgtcgagtag
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