Petromyzon marinus (sea lamprey): 116945605
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Entry
116945605 CDS
T09614
Name
(RefSeq) indian hedgehog protein-like
KO
K11988
sonic hedgehog
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
116945605
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pmrn01002
]
116945605
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pmrn00536
]
116945605
Peptidases and inhibitors [BR:
pmrn01002
]
Cysteine peptidases
Family C46: hedgehog family
116945605
Glycosaminoglycan binding proteins [BR:
pmrn00536
]
Heparan sulfate / Heparin
Morphogens
116945605
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Gene cluster
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
Motif
Other DBs
NCBI-GeneID:
116945605
NCBI-ProteinID:
XP_032815971
UniProt:
A0AAJ7TFL7
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Position
2:7577310..7594248
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AA seq
450 aa
AA seq
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MAVGWMRRARQRVTVLALLVLLVALLVLVSCPAPARGCGPGRGYGSRRRLPRKLTPLAYK
QFVPNVAEKTLGASGRYEGKIARGSERFKDLTPNYNPDIIFKDEENTGADRLMTQRCKDR
LNALAISVMNQWPGVKLRVTEGWDEDGHHSEESLHFEGRALDITTSDRDRAKYGMLARLA
AEAGFDWVYYESKAHVHCSVKAENSVAAKSGGCFPGEASVWLEGGVAAPLRDVQPGQRVL
SADGTGALLYSPVLLFLDRQPRVRQLYYVIETGENPRRRLKLTPAHLLFVAPNGTDFSRG
DGAGAIFASSVRPGHFVFVRETAATPGHPGRVRPERVAAVYTEEALGAYAPLVSSGTVLV
DGVLASCYAAVSSHELAHAALGPVRLLHGLAAGLGPGRPANGTCSSGEPADERSSEEEEE
EGVHWYSRLLYRIGSLVLDKAMFHPLGMPD
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggccgtggggtggatgcggcgagcgaggcagcgcgtcacggtgctcgccctgctcgtg
ctgctcgtggcgctgctggtgctcgtgagctgcccggcgccggcgcgcggctgcggcccg
ggccggggctacggcagccggcggaggctgccgcgcaagctgaccccgctcgcctacaag
cagtttgtgcccaacgtggccgagaagaccctgggagccagcggtcgctacgaggggaag
atcgcgcgcggctccgagaggttcaaggacctgacgcccaactacaaccccgacatcatc
ttcaaggacgaggagaacacgggcgcggaccgcctcatgacgcagcgctgcaaggaccgg
ctgaacgcgctcgccatctccgtgatgaaccagtggcccggtgtgaagctgcgcgtcacc
gagggctgggacgaggacggccaccactcggaggagtcgctgcacttcgaggggcgcgcg
ctcgacatcaccacgtcggaccgcgaccgcgccaagtacggcatgctggcgcgcctggcg
gccgaggcgggcttcgactgggtctactacgagtccaaggcgcacgtgcactgctccgtc
aaagccgagaactctgtggccgccaagtcaggcggctgcttcccgggcgaggcgagcgtc
tggctggagggcggcgtcgccgctccgctgcgagacgtgcagcccggccagcgtgtgctc
agcgccgacggcaccggcgcgctgctctacagccccgtactgctcttcctcgaccgccag
ccacgcgtccgccagctctactacgtcatcgagaccggggaaaaccctcgccgccgcctc
aagctcacgccggcgcacctcttgttcgtcgcgcccaacggcacggacttttcccgcggc
gacggagccggcgctattttcgcgagcagcgtgcgcccgggccacttcgtgttcgtgcgg
gaaacggcggcgacgccgggccacccggggcgcgtgcggccggagcgcgtcgctgccgtc
tacacggaggaggcgctcggggcatacgctccgctcgtgtcgagcggcacggtgctcgtg
gacggcgtgctcgcatcctgctacgccgccgtcagctcgcacgagctggcccacgcggcc
ctggggcccgtgcgtctcctgcatggcctggcggcggggctgggcccaggccggcccgcc
aacggcacgtgcagcagcggcgagccggcagacgagcgctcgtcggaggaggaggaggag
gagggcgtccattggtactcgcgtctgctgtaccgcatcggctcactcgtactggacaaa
gccatgttccatccgctggggatgccggactga
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