Petromyzon marinus (sea lamprey): 116945627
Help
Entry
116945627 CDS
T09614
Symbol
SAMM50
Name
(RefSeq) sorting and assembly machinery component 50 homolog
KO
K07277
outer membrane protein insertion porin family
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
116945627 (SAMM50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
pmrn03029
]
116945627 (SAMM50)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pmrn02000
]
116945627 (SAMM50)
Mitochondrial biogenesis [BR:
pmrn03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
116945627 (SAMM50)
Transporters [BR:
pmrn02000
]
Other transporters
Pores ion channels [TC:
1
]
116945627 (SAMM50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Omp85
FLQE3_permease
POTRA
Motif
Other DBs
NCBI-GeneID:
116945627
NCBI-ProteinID:
XP_032816018
UniProt:
A0AAJ7TG42
LinkDB
All DBs
Position
24:complement(11342802..11395226)
Genome browser
AA seq
470 aa
AA seq
DB search
MGSVHAKALEPIPMDGPEHHSAFHEGSMLDDPGVETKQEVLDNKQVLVQNVSIQGLERTK
DDYIMHEISDVFNATSLVEVMQKSHEAREKMLRLGIFRHVEVLIDTAKGPGAQPDGLDIN
FEVVEMRRLTGSYNTMVGNNEGSMVLGLRLPNLFGRAEKLTFQFSYGTKETSYGLSFFKP
QTGCFERNLSASVYKITGQFPWSSLRQTDRGVSLDLNFPLWKTRHCVRWEGAWRELGCLA
RTASFAVRQESGHSLKSSVSHTMVFDTRNASILPTQGLLLKVNQELAGYTGGDVKFLKED
FELQLNKKLLWDSVLSASLWGGMLMPIGDRPSSIADRYFLGGATTVRGFSMYSIGPQSEG
DYLGGEAYWAAGLHLYTPLPFRPGHGGFGDLFHAHFFLNAGNLCNLNYEEGPRSQLARLA
DGLRWSYGAGILLRLGNIARLELNYCIPACVQPGDRICDGIQFGAGIRFL
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgggctctgtgcatgccaaggcgctggagccgatcccgatggatgggccggagcatcat
agtgccttccatgagggctccatgctggacgaccctggggtggaaaccaagcaggaggtc
ttggataataagcaggtccttgtgcaaaacgtgagcattcagggtctggagagaaccaag
gatgactacatcatgcatgagatctccgatgtcttcaacgccaccagcctcgttgaagtc
atgcagaagtcgcacgaggctcgggagaagatgctgcgcctggggattttccgtcacgtg
gaggtgctgatcgacaccgccaagggtcccggggctcaacccgatggactggatattaac
ttcgaggtggtggagatgcgtcgcctcactggtagttacaacaccatggtggggaacaat
gagggcagcatggtgctaggcctgaggctgcccaacttgtttggccgagcggagaagctg
accttccagttttcctatggcaccaaggagacatcttatggcctgtcgttcttcaagccg
cagaccggctgctttgagcgcaacctctcggccagcgtgtacaagatcacggggcagttc
ccctggagctcactgcgccagacggacaggggcgtctcccttgacctcaacttcccgctg
tggaagacgcggcactgcgtgcggtgggagggcgcgtggcgtgagctgggctgcttggcg
cgcaccgcttcctttgccgtgcgccaggagagcggccactccctcaagtcgtccgtctcg
cacacgatggtgtttgacacccgcaacgcgtccatccttcccacgcaagggttgctgctc
aaagtcaaccaggagctggccgggtacacaggcggcgatgtgaaattcctgaaagaggac
ttcgagctgcagctcaacaagaagctgctgtgggattcggtgctgtctgcgtcgctgtgg
ggtgggatgctcatgccgattggagatcggccgtcttccatcgctgacaggtatttcctg
ggaggcgccaccaccgttcgaggattcagcatgtacagcattggcccccagagtgaaggg
gactacctgggcggtgaggcctactgggcggccggcctgcacctgtacacgccgctgccc
ttccggcccggccacggaggcttcggggacctcttccacgcgcacttcttcctcaacgcc
ggcaacctgtgcaacctcaactacgaagagggaccccgctcgcagctggcgcgcctggcg
gatggcctgcgctggtcgtacggcgccggcatactgttgcggctgggaaacatcgcgcgt
cttgaactcaactactgcatccctgcctgcgtgcagccgggagacaggatttgcgacggg
attcagtttggcgcaggaatccgcttcctctaa
DBGET
integrated database retrieval system
