Petromyzon marinus (sea lamprey): 116945661
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Entry
116945661 CDS
T09614
Name
(RefSeq) interferon regulatory factor 6-like
KO
K10154
interferon regulatory factor 6
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmrn03000
]
116945661
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmrn04147
]
116945661
Transcription factors [BR:
pmrn03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
116945661
Exosome [BR:
pmrn04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
116945661
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Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
116945661
NCBI-ProteinID:
XP_032816081
UniProt:
A0AAJ7WZT2
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Position
24:complement(13552812..13568023)
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AA seq
534 aa
AA seq
DB search
MSGGRHKPRLGPWLVAQVDGGRYPGLLWLDDSKTQFRVPWPQVCRGDAANEPCALYRAWA
VTSRKFQEDRDAPDPPKWKTNLRCALNKSRDFRCVLDASKETPPYKVYEWCAHVPHGGAQ
APGIKEPKEEEEEEDEDENGVSSTEPTTSPESLPPYTPSIDYGIPSENPELNKNIEMLTL
VDDQGPPPPPHWERGPSSFGLSPERPTEATRMIGAPLGEPPALSATHLDPEVCVPPVDVP
MPDEGGGFRALPQICLPPETDLELQMEYRGACVMAPVTVRGGRGCRLYSGDLDLQRDIAP
QYNGLLGPMEYEQIAFPSPACITDGRQRELTERVLRFTERGLVLEARGGRLLATRLGQSR
VFWSRGRVAPGGPTPPPCLLERETPTELLDFQAYITELLACLQNGGGAEFPDPRVLLCFG
EEWPDPQRPRHKKLIMVQVVPTAMRMLRELAEGAPLCSISLNSDQLQISEQNENDNIVAY
LRFRLQQHQQQQQQQQEQQQLMQQQQQHQQRLELQQQLEELQQNQMQQLHLQLI
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgagtggggggaggcacaagccccgcctgggtccctggctcgtggcccaggtggatgga
ggccgctacccgggcctgctgtggctcgacgactccaagacgcagttccgggtgccctgg
ccgcaggtgtgcagaggggacgcggccaatgagccgtgtgctctgtacagggcgtgggcg
gtgacctcgcgtaagttccaggaggatcgcgacgcgcccgacccccccaagtggaagacg
aacctccgctgtgccctcaacaagagccgcgacttccgctgcgtgctcgacgcctccaag
gagacgccgccctacaaggtgtacgagtggtgcgcgcacgtgccgcacggcggggcacag
gcgccgggcatcaaggagccaaaagaggaggaggaggaggaggacgaggatgagaacggg
gtgagctccaccgagcccacgacgagtccggagtcgctccccccctacactccgagcatc
gactacggcatccccagcgagaatccggagctgaacaagaacattgaaatgctgacgctg
gtggacgatcaaggcccgccgccccccccccactgggagcgaggcccctcttcgttcggc
ctgagccccgagcgccccacagaggcgacgaggatgattggggcccccctcggggagccc
cccgccctctcggcgacccacctcgacccggaagtgtgcgtgccccccgtggacgtgccc
atgccggatgagggggggggcttccgagcgctcccccagatctgcctgcctccagagaca
gacctggagctgcagatggagtaccgcggggcgtgcgtcatggcccccgtcacggtgcga
ggcggcagaggctgccgcctctacagcggcgacctcgacctgcagagggacatcgccccc
cagtacaacggcctcctgggccccatggagtacgagcagatcgcgttcccgtcgcccgcg
tgcatcacggatgggaggcagcgggagctcacggagcgcgtgctgcgcttcaccgagcgg
ggcctggtgctggaggcacgggggggccgcctgctggccacgcggctgggccagagccgc
gtgttctggtcgcggggccgcgtggcgcctggggggcccacgccccctccgtgcctcctg
gagagagagacccccacggagctgctcgacttccaggcctacatcacggagctgctggcg
tgcctgcagaatggagggggcgcggagttccctgacccccgcgtgctgctctgcttcggg
gaggagtggccggacccacagcggcctcggcacaagaagctcatcatggtgcaggtggtg
cccacagccatgcgcatgctgcgcgagttggcagagggagctccactctgctccatatcg
ctcaactcggaccagcttcagatctcagagcagaacgagaacgacaacatcgtggcctat
ctcaggttccgcctgcaacaacatcagcagcaacagcagcaacagcaggagcagcaacag
ctgatgcagcaacagcagcagcaccagcagcggctggagctacagcaacagctggaggaa
ctacagcagaatcaaatgcagcagctgcacctacagctgatttag
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