Petromyzon marinus (sea lamprey): 116945670
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Entry
116945670 CDS
T09614
Symbol
RBM28
Name
(RefSeq) RNA-binding protein 28 isoform X1
KO
K14573
nucleolar protein 4
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
116945670 (RBM28)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pmrn03009
]
116945670 (RBM28)
Ribosome biogenesis [BR:
pmrn03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
116945670 (RBM28)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Extensin_1
RRM_MARF1
Motif
Other DBs
NCBI-GeneID:
116945670
NCBI-ProteinID:
XP_032816091
UniProt:
A0AAJ7TFV0
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All DBs
Position
24:complement(13853785..13866028)
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AA seq
943 aa
AA seq
DB search
MMSSPGEPIERANWGSEDADMAAPVRATGASLFVRGLPRDASAAGLEEALGEFGPIRQCF
VVTEKGSPHCKGFGYVTFALPADAAQALKGKVEYHGHKLITTVAKKKPPVKKTKPSKTEA
EEAATTEEPAWESQPRQRPTLELSGLPPALEPEMLESLCRQRAGVLDVARVPDHPTKVHV
SFSTVREATTAMTFWQQNLIQGKRVSVVLLYRPGIMKKSRLRARLIVRNLSFKCSQGDLK
RAFSPFGIVLEVNIPKKPDGKMKGFGFVQFTSMPDATRALKEMNSKEIKGRAVSVDWALA
KDKYELANASKAPGKKAEGKQGAINGGSKGPAGDEDKDDEDDEDKEKEEDTECVAQAAPP
GRETRAGPRSGDGDPESESGSDEGSTAASNDDDDDAHGDDGSDDESDDEDGSDDEDDDEE
SDGEKKRAVNRNLPSDVGEGKTVFIRNLSFDSEEGPLGEVLTKFGKLRYVRVVLHPDTEH
SKGCAFAQFHTAEAAQACIAATQGPEEAGGLALDGRRLVVCLAVSRDEARTLADKRDAKP
TDRRNLYLAREGLIRAGTAAAEGLGSADLAKRERFEQLKRQKLRRVTVFVSRTRLCVHNI
PKSADDKKLRSIFLCAGGPGARITECRIMRDMQVVNSRGLGQSKGFGFVEFVEHEHALTA
LRSTNNNPAIFGPAKRLIVEFSLEDRVKLNAKEARLLKSRQKQAAVKGKGNVAIDVAGGG
AGGVWKGKASGNAKGQKGMSAVAQESRGSEPHKTGAREPGRAKVGAGGAVGKGGGGTGRW
AGFQTRVEEQRQEEGDGPRRKLLPLPSHSGPKIRKRDKGKPLAMKRDQKPKNKKSRAERR
SGGAGGEGLPQQALSRVPAGVAPAHRTPVQRTLVQRTLVQRTPVQRTPAQSTPAQRTPRA
EKRAHQADHEERRFGDLVKRYKQRIFGSEQAAMRPMASKWFQE
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcatcgcctggcgagccaattgagcgcgcgaactggggtagtgaagacgcggac
atggcggcccccgtgcgtgccacaggcgcctcgctgtttgtgcgcgggttgcctcgcgac
gcgagcgccgccgggctcgaggaggcgctcggggagttcggccccatcaggcagtgcttc
gtggtcacggagaagggctcccctcactgcaagggctttggctacgtgacgtttgcgctg
cccgctgacgccgcgcaggcgctaaaggggaaggtcgagtaccatggacacaagctcatc
accaccgtcgccaagaagaagccaccggtcaagaagaccaagccctctaagaccgaagca
gaggaggctgcgacgacggaggagccggcgtgggagagccagccgaggcagcggccgacc
ctggagctcagcggcctgcccccagcgctggaacccgaaatgctggagtcgctatgcagg
cagcgtgctggggtgctggacgtggcccgtgtgcccgaccacccgaccaaggtccacgtc
agcttctccaccgtgcgggaggccaccaccgcgatgactttctggcagcagaacctaatc
caaggcaaacgcgtctcggtagtgttgctgtaccggccgggcatcatgaagaagtctcgc
cttcgtgcccgtctcattgtgcgcaacctcagctttaagtgttcacagggcgatctgaaa
cgagcgttctctccttttggaatcgtgctggaggtgaacatcccaaaaaaaccagatggg
aagatgaaggggtttggcttcgttcagttcaccagcatgccagacgccaccagggctctg
aaggagatgaacagcaaggagattaaaggacgggccgtgtccgtggactgggccctggcc
aaggacaagtacgagttggccaatgcatccaaagcaccgggaaagaaggcagagggcaag
caaggtgcaataaatggagggagcaaggggcccgctggagatgaggacaaggatgatgag
gatgacgaggataaggagaaggaggaggacacggagtgtgtggcccaggcggcgccaccc
gggcgggagacgcgagcagggccgcggagtggagacggcgacccggagagtgaatccggc
tcggacgagggcagcactgcagcctccaacgatgacgatgacgacgcgcatggggacgac
ggctcggacgacgagtcggacgatgaagacggctcggacgatgaggacgacgacgaggag
agtgacggtgaaaagaagcgtgcggtgaatcgcaacctccccagtgacgtgggcgagggc
aagacggttttcatcaggaatctctcctttgactctgaggagggccccctgggcgaggtg
ctcaccaagtttgggaagctgcgctacgttcgcgtggtcctgcaccctgacacggagcac
tcgaagggttgcgcgttcgctcagttccacacggcggaggcggcgcaggcgtgcatcgcc
gcgacccagggtcccgaggaggctggtggcctggctctagacgggcgccgtctggtcgtg
tgtttggccgtgagccgcgacgaggcccgcacgctggccgacaagagggacgcaaagccg
accgaccggcgcaacctttacctggcgcgcgagggcctgatccgagctggaacggcagca
gctgaaggtctcggctcagctgacctggccaagcgagagaggtttgagcagctaaagcgg
cagaagctgcggcgcgtcaccgtgttcgtgtcgagaacgcgcctctgcgtgcacaacatc
cccaagtcggcggacgacaaaaagctgcgctccatcttcctgtgcgctggcggaccaggt
gcccgtatcaccgagtgtcgtatcatgcgcgacatgcaagttgtgaacagccgcgggctg
ggccagtcgaaaggctttggctttgtggagtttgtggagcacgagcacgcattgacggcg
ctgcgcagcaccaacaacaacccggccatctttggtccagccaagcgcctgatcgtagag
ttctcccttgaagaccgggtgaagctaaatgcaaaggaggcccgattgctcaagagtcgg
cagaagcaggcggccgtgaaggggaaagggaatgtggcgatagatgtagcaggaggggga
gcaggaggagtatggaagggcaaggcttctgggaatgccaagggacagaaagggatgagc
gccgtggcgcaggagagccgaggatcggagccgcacaagacaggggcacgggagcccggg
agggcgaaggtcggcgccgggggagccgtggggaagggggggggcggcactggccggtgg
gccgggttccaaacacgtgtggaggagcagcgccaggaggagggagacggtccgcgccgg
aagctgctgccactgccttcacactctggacccaaaatccggaaacgcgacaaggggaag
ccattggccatgaagagagaccagaaacctaagaacaagaagagcagagccgagaggaga
agtggaggggcagggggggaggggctgccacagcaggcattgtcacgcgtcccagctgga
gtggcaccggcgcatcgaactccggtgcagcgaactctggtgcagcgaactctggtgcag
cgaactccggtgcagcgaactccggcgcagagcactccggcgcagcgaactccgcgagct
gagaagcgagcacaccaggcggaccacgaggaacgccgttttggggatcttgtcaagcgc
tacaagcagcgaatattcggctcagagcaagcggccatgcgacctatggccagcaagtgg
ttccaggagtga
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