Petromyzon marinus (sea lamprey): 116945673
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Entry
116945673 CDS
T09614
Symbol
ATG13
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04136
Autophagy - other
pmrn04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
116945673 (ATG13)
04136 Autophagy - other
116945673 (ATG13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmrn04131
]
116945673 (ATG13)
03029 Mitochondrial biogenesis [BR:
pmrn03029
]
116945673 (ATG13)
Membrane trafficking [BR:
pmrn04131
]
Autophagy
Autophagosome formation proteins
ULK complex
116945673 (ATG13)
Atg1 complex
116945673 (ATG13)
Mitochondrial biogenesis [BR:
pmrn03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
116945673 (ATG13)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
116945673
NCBI-ProteinID:
XP_032816096
UniProt:
A0AAJ7X020
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All DBs
Position
24:complement(13890487..13903823)
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AA seq
460 aa
AA seq
DB search
MLDIMDSPKELSLQDKKDLDKFLKFFALKSVQVIVQARLGERIITKSSASSSGSDWFNLV
IRDIPEVSQEAKRAMGNQLPGVGMPMCVEVSLKTCEGDSMGLEVWSLEMNEKCDHEVKVS
YTVYNRLSLLLKSLLAVTRVTPAYKLSRKQGHDYVILYRIYFDEVQLGCLGEGFQTLRVG
MVGTPEGTITLGCAYRTNLTFIANRQLEQNKPLMGIIIDHFSDNPRHSSSAAQPCMHRRA
GGGEETCGSTDDFQDMCASSFSTSPPSQVHCGYHDEGDGGGSSSLPSTCTHTPPRPSGAG
RSGVQDLLLFPVCRKPGAFVSKPPAQVSPALDLPFASFVRDATAEEGVSEGPPSSPLPGS
PEHSGPLESLHGSLGSPHGSQILHDDFIIVDLKPAFSKDDLLPMDLGSFYREFQNPPPLS
SFCIESITQSMAEDFDSLPEKLAEYERSMEEFDSFVETLQ
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgctcgacatcatggattcgccgaaggagttgagccttcaagacaaaaaggatttggac
aagtttttaaaattcttcgcactcaagtctgtacaggtgattgtccaggcccggctaggc
gagcgcatcatcaccaagtccagcgcctcgtcatctggctccgactggtttaacttggtg
atcagagacattccggaagtgagtcaggaagcgaagagagccatggggaaccagctacct
ggagttggcatgcccatgtgcgtggaggtctccctgaaaacatgcgagggtgattccatg
ggactagaagtttggagcttggaaatgaatgagaagtgtgatcacgaggtgaaggtctcc
tacactgtgtataaccgtctctctctgcttctcaagtcactgctggccgtcacacgcgtc
acgccggcctacaagctctcgcgcaagcagggccatgactacgtcatcttgtacagaatc
tatttcgatgaagttcagttggggtgcctaggtgaaggttttcagactctgcgtgtgggc
atggtgggaacaccagagggcaccattaccctgggctgtgcctaccgcaccaacctcact
ttcattgccaacaggcagttggaacagaacaagcccttgatgggtatcattattgatcac
ttctccgacaacccccggcacagctcctctgccgcccagccctgcatgcacaggcgagca
ggcggtggggaagagacatgtggctctaccgatgacttccaggacatgtgcgcatcctcc
ttctccacatcgcctccgtcgcaggtgcattgtggataccatgatgagggagatggaggt
ggctcatcatcactaccgtccacgtgtacgcacacgccgcctaggccaagtggagcgggg
aggagtggggtgcaggacctgctgctcttccctgtgtgtcgcaagccaggggcttttgtc
agtaaaccacctgcgcaggtgtccccggcacttgacctcccgtttgcgtcatttgtgcga
gatgccacggcagaagagggggtcagcgagggtccccccagctctccgctccccgggtcc
cctgagcacagtggtcccctggagtccctgcacggctccttggggtccccccacggatcc
caaatcctgcatgacgacttcatcattgttgacctgaagccggcgttctccaaagacgac
ctcctgccgatggaccttgggtccttctatcgcgaatttcagaacccccctcccctcagc
agcttctgcattgagagcatcacccagtcaatggcggaggattttgactctctaccggag
aagttggctgaatatgagcgcagcatggaggagtttgattcatttgtagagacgctacaa
tga
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