Petromyzon marinus (sea lamprey): 116945729
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Entry
116945729 CDS
T09614
Name
(RefSeq) cadherin-15-like
KO
K06809
cadherin 15, M-cadherin
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
116945729
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pmrn04515
]
116945729
Cell adhesion molecules [BR:
pmrn04515
]
Cadherins
Major cadherins
116945729
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_FAT4_N
Motif
Other DBs
NCBI-GeneID:
116945729
NCBI-ProteinID:
XP_032816124
UniProt:
A0AAJ7WZP3
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All DBs
Position
25:complement(1481256..1520625)
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AA seq
818 aa
AA seq
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MLPSVCVLLAFVAGQGFALKAGASDEWLQSGVDGWWLRYSQDVVVAATSVNGGGRVKRAW
VIPPISVGENLPQRSLPKFLVQIKSDKQANTTIIYSVKGVGVDLPPTGVFRIDKVSGNIY
LEKPLDREERPQFRIKAYALDAAGKSVEEAVDLDIIVVDMNDNRPVFNSSVFVGHVKENS
EPGALVMRVGALDADDPNTDNGDLRFSILDQSPEQPEASMFSIDPHTGDIRTVTVGLDRE
AVASYNLTLQVSDMAGGPAGLVTTATAVVHVDDVNDNGPRFTQSSFMAVVGEGDVGRAAV
LTVRDEDVPGTPAWLALYRITAGDPGGLFTVDTDPETNAGILTITQPLDYETSTRYVLTV
TAENQAPLETAGAVGDQEEGAAGGASAATVTVYVQDRNEAPAFPESPRRVALGEHTRRGD
AVARYAVTDPDHIANQKITYTVAWDPAGWLDVDVDTGDITAKRDLDKMSGFLEGGVYSAV
IMAEDDGIPPHTATGTLHVTLLEQNDFAPALSPLAGALCHERGKGEGLLLQGWDADLAPQ
AAPFHFGFHPDFPEFADNFTITPVNGTHALLQLRVEQVREGDYELPLVLSDSGSPALANS
PTLNLTVCTCDAFGDCVVKAFIVGGPAMGLSTPAILAIIFSIIALLLLVLCIFIVDGLRD
RLPLGKSRLFGASDDDIRDNILNYNEQGGGEEDQDAFDVDQLRNPDAVAPDAPMPGKPRQ
RKDTPTTAPQPQYPRRAPSDPSDMEDFINQSLDTADRDPTAPPYDSYLLYDYEGEGSTAG
SLSSLQSSSTNGDQDYDHLSDWGPRFNKLADMYSGGQD
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atgctgcccagcgtttgtgtccttctcgccttcgtggcggggcagggcttcgcgctgaag
gccggagcctccgatgagtggctgcagtccggtgtagatgggtggtggctgcgctactcc
caagatgttgtggtggcggccacgtcggtgaacggtgggggtcgcgtgaagagagcctgg
gtcatcccgcccatcagcgtcggcgagaacctgccccagcgcagcctccccaagttcctg
gtgcagatcaagtcggacaaacaggcgaacaccaccatcatctacagcgtcaagggcgtg
ggcgtcgacctgccgcccacgggcgtgttccgcatcgacaaggtgtctggcaacatctac
ctggagaagccgctggaccgggaggagaggccccaattccgcatcaaagcgtacgcgctg
gacgcggccggcaagtccgtggaggaagccgtggacctggacatcatcgtggtggacatg
aacgacaaccgtcccgtcttcaacagcagcgtcttcgtggggcatgtcaaggaaaattcg
gaacccggggcactcgtgatgcgcgtcggcgcgttggacgcggacgaccccaacacggac
aacggcgacctgcgcttctccatcttggaccagtctccggagcagcccgaagcctccatg
ttcagcatcgacccccacacgggcgacatccgcaccgtgaccgtcggcctcgaccgagag
gcggtggcgagctacaacctgaccctccaggtgtcggacatggctgggggtcccgcgggc
ctggtgaccacggcgacggccgtcgtccacgtggacgacgtcaacgacaacggccctcgg
ttcacacagagctcgttcatggcggtggtgggcgagggggacgtggggcgcgccgcggtg
ctcaccgtgcgcgacgaggacgtccccggcacgccggcgtggctcgccctctaccgcatc
acggccggggacccgggcggcctcttcaccgtggacaccgaccccgagaccaacgccgga
attctcaccatcactcagccgctggactacgagacgagcacgcgctacgtgctcacggtg
acggccgagaaccaagcgccgctggagacggccggtgccgtcggggaccaggaagagggg
gcggccgggggggcgtcggcggcgacggtcaccgtctacgtgcaggaccgcaacgaggcg
cctgccttccccgagagcccgcgccgcgtggcgctcggggagcacacgcggcgcggcgac
gccgtcgcgcgctacgcggtcaccgaccccgatcacatcgccaaccagaagatcacctac
acggtggcgtgggacccggcgggctggctggacgtggacgtggacacgggcgacatcacc
gccaagcgggacctcgacaagatgtcgggattcctggagggaggagtgtactctgctgtg
atcatggcagaggacgatggcatcccgccgcacacggccacgggcacgctgcacgtgacg
ctgctggagcagaacgacttcgcgccggctctgtcgccgctcgccggcgccctctgccac
gagcggggcaagggcgaggggctgctgctgcagggctgggacgccgacctggcgccccag
gccgctcctttccactttggctttcacccggacttccccgagttcgccgacaacttcacc
atcacgcccgtcaacggcacccacgcgctgctgcagctgcgggtggagcaggtgagggag
ggcgactacgagctgccgctcgtcctctccgactcgggctcgcccgccctggccaactcg
ccgacactcaacctcaccgtgtgcacctgcgacgcgtttggcgactgcgtggtcaaggcc
ttcatcgtggggggcccggccatgggcctcagcacccccgcgatcctcgccataattttc
tccatcatcgccctgctgctgctcgtgctctgcatattcattgtggacggcctccgggac
cggctgcccctgggcaagagccgtctcttcggagcgtcggacgatgacatccgtgacaac
atcctcaattacaacgagcagggcggaggcgaggaggaccaggacgcgtttgacgtggac
cagctgcgcaacccggacgcggtggcccccgacgctcccatgccgggaaaaccgcggcag
cgcaaggacaccccgaccacggcgcctcagccgcagtacccacgccgggcgccctccgac
ccctcggacatggaggacttcatcaaccagagcctggacacggcagacagggacccgacg
gcgcccccctacgactcgtacctcctctacgactacgagggagagggctccacggccggc
tcgctcagctcgctgcagtcgtcctccaccaacggggaccaggactacgaccacctgtcc
gactgggggcctcgcttcaacaagctcgccgacatgtactccggcggccaggactga
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