Petromyzon marinus (sea lamprey): 116945836
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Entry
116945836 CDS
T09614
Name
(RefSeq) RNA-binding protein 39-like isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmrn03041
]
116945836
Spliceosome [BR:
pmrn03041
]
Common components
Common spliceosomal components
General mRNP proteins
116945836
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RBD_DEAH11
RRM_7
RRM_5
Motif
Other DBs
NCBI-GeneID:
116945836
NCBI-ProteinID:
XP_032816302
UniProt:
A0AAJ7WZV3
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Position
25:complement(2922649..2936721)
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AA seq
578 aa
AA seq
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MISAHRCAHPCPLLHYCLSRQNVSAADKVAAVAASDVPFSYLGEEKKSSSAIHSSGEKSK
KKRSRSRSRERKRSRSRDKRRSRSRDRRDGKPGRSREGRSRSHGRRRSRSRSRGHRHGGG
SGDRGKFRSPSFYGRKPENPEETHANQERTYKLHTESRRSGRSKSKSPRRKSPIRSNTAA
VGHAATHEDRPPHPTRAPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSAVGKVRDVR
MISDRNSRRSKGIAYIEFVEVDSVSLAIGLTGQRLLGVPIIVQASQAEKNRAAAAAAAAA
TMQKSTAGPMRLYVGSLHFNITEDMLKGIFEPFGKIENCQLMMDSDTGRSRGYGFVTFAD
AECARKALEQLNGFELAGRPMKVGHVTERSDGSGASSFLDNDELERTGIDLGSTGRLHLM
AKLAEGTGLQIPLAAQQALQMTGGFGLGTTNPVMPVLNNAAPPSIATQCIQLSNMFSPES
EQSHTWDQDIRDDVITECMKHGGLVHIFVDKNSPQGNVYVKCSSVASAIATVNALHGRWF
AGKMITAAFVPVPTYHNLFPDSTMATQLLFPVRSSQGI
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgatttcggctcatcgttgtgcccacccgtgtccgctattgcattactgtttgtctcgg
cagaatgtaagcgcggcggacaaggttgcggctgtggcggctagcgatgtgcccttcagc
tacctcggcgaagagaaaaagagctcctctgccattcactcttctggagaaaaatccaaa
aaaaagcggagccgcagcagaagcagagagcgaaagaggagcaggagccgagacaagcgc
cgtagtcgcagtcgcgaccggcgcgatggtaaacccggccggagtcgcgaggggcgaagc
cggagtcacgggcggcggcgaagccgctcccggagccggggccaccggcacgggggcggc
agtggggaccgcggcaaattcaggagccccagtttctatgggaggaaaccagagaacccg
gaggaaacccatgcaaaccaagagagaacatacaaactccacacagaaagccgccgcagt
ggccgcagcaagagtaaaagcccacggaggaagagccccatcaggtctaacactgctgcc
gtgggccatgcagcgacccatgaggaccggcccccacaccctactagggcccccatcgat
aacctgactcccgaggaacgcgatgcacgcacagtgttctgcatgcagctggcagcacga
atccgaccccgcgaccttgaggagttcttctccgccgtgggcaaggtgcgcgacgtgcgc
atgatctcggatcggaattcccggcgctccaagggcatcgcctacatcgagtttgtggaa
gtggactcggtgtctctggccattgggctgacgggtcagcgtctccttggtgtgcccatc
atcgtccaggcctcccaggctgagaagaacagagctgctgcagcggcggctgctgcagca
acaatgcagaagagtaccgccgggccaatgcgtctctacgtgggctcactacacttcaac
atcaccgaggacatgctcaagggcatcttcgagcccttcggcaagatcgagaactgccag
ctgatgatggacagcgacacgggccggtctaggggctacggctttgtcacgtttgcggac
gcggagtgcgcacgcaaggccctggagcagctcaacggtttcgagctggcggggcgaccc
atgaaggttggccacgtcacggagcgttcagacggctcgggcgccagctcattcctcgat
aacgacgagctggagcgcacgggcatcgacctgggcagcacaggacgcctgcacctcatg
gccaaactggccgagggcacggggctgcagattccactggcggcccagcaagcgctgcag
atgactgggggctttggtctgggcaccacaaaccccgtgatgccagtgctgaataacgct
gcgccgccttccattgccacacagtgtatccagctgtcgaacatgttctctccagagagc
gaacagtcgcacacctgggatcaggacatccgcgatgacgtcatcacggagtgcatgaag
cacggtggcctagtgcacatcttcgttgataagaactccccccagggtaacgtgtacgtg
aagtgttcatcagtcgcgtccgccatcgccaccgtcaacgccctgcacggacggtggttc
gctgggaaaatgatcaccgcggcctttgtgccagtgccaacttaccacaacctcttcccg
gactcgaccatggcaactcagctgctgtttcccgtcaggagctctcaaggcatttga
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