Petromyzon marinus (sea lamprey): 116945848
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Entry
116945848 CDS
T09614
Name
(RefSeq) cadherin-4-like
KO
K06797
cadherin 4, type 1, R-cadherin
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
116945848
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pmrn04515
]
116945848
Cell adhesion molecules [BR:
pmrn04515
]
Cadherins
Major cadherins
116945848
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
116945848
NCBI-ProteinID:
XP_032816346
UniProt:
A0AAJ7TGB9
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Position
25:3380258..3408840
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AA seq
921 aa
AA seq
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MARDAALLRRMVMLAVLAAMAVTVSSHELLAHLGQARARREWNAPPIAVTEGPTGPYPKY
LTSVITDNEKLMKVTYRISGEGTDLEPRNCFSIDEVTGKIFQNKELDREERWSYKLNVQA
YDDKGQALEQPLEFVIVVKDINDNAPEFSSSNIKGSVQEGVPVGAFVMQISGTDRDQAGT
DASAIAYRIVSQSPANAFTVDRKTGVVRTTSLLDRETVTSYSLVVEASDNNGDGSGLSST
TAVTIAVGDINDNPPIFSENMFTGKVEENKKDVVIGRVKVTDADLVNTPAWRARYFIVSG
NEAGNFAIETDPVTNEGIVKLIKPLDYEMTSSQSLSIRVENEIALVSGSSSSSSMSISGG
GGGGGGGGGGGGGGGGGGGGSSSSHNSMSMFLVDVLDVDERPVFAPNMIRVDRLEGQATG
QSLAKFKASAPTSVPGGASHVMRYGKLNDPANWLEIDPVTGDIRTRAPLDRESPHVVNNT
YTATFSVVDETSPSGTNTGTIVIKLDDNNDNAPDVVTRNVSVCETGPDYVTVTASDPDTD
INGKPFTFELPADSAWTVSETDGTSAVLKYRSQRIPRGVHAVPLMVRDRLGLGEVRNVTV
SSCPCEPGSSEPSCEAVGVAGSRAGGLSDGALAGILAGILGFLMLGILLLLCCCKFGKKQ
TLIGKLMGELPKSSLSTSTRGEEQDKALGGMQGHSESVPLVTKSSGSANFSSSKVTKEKF
VNQSVTESKFGLNQGRSFAKGAGAAGAAAGAAAGAAAGAALGAGLGAGMGAGAGGGAGAM
RGGAYVESSAAGNMTNGHMGASHSSVSDTEMDGSGYMGNAGGGGGRPITTLARRSCVNGG
IDMQQQGGFADYFGETMQHSDMNLMESGGQMGQGGGDTAYFMTESLKILDQDVAAPDTLL
IFNQEGTMGGSQFSLVCQDML
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atggccagagacgcggcgctcctgcggaggatggtgatgttagcggtgttggcggcgatg
gctgtgacggtgtcttctcacgagctcctcgcacacctgggccaggcccgggcccgcagg
gagtggaacgcgccgcccatcgccgtaaccgaggggcccacgggcccctaccccaaatac
ctcacctcggtgatcacggacaatgagaagctgatgaaggtgacgtaccgcatctcgggc
gagggcaccgacctcgagccgcgcaactgcttctccatcgacgaggtcacggggaagatc
ttccagaacaaggagctggaccgcgaggagcggtggtcctataagctcaatgtgcaggcg
tacgacgacaaaggccaggcgctggagcagcccctcgagttcgtcatcgtggtgaaggac
atcaacgataacgcgcccgagttctcgtcgtccaacatcaaggggtcggtgcaggaaggc
gttcccgtcggcgccttcgtcatgcagatatccggcaccgacagggaccaggccggcacg
gacgcgagcgccatcgcctaccgcatcgtgtctcagagccccgccaacgccttcaccgtt
gaccgcaagaccggagtggtgcgcaccaccagcttgctggaccgcgagacggtgacctcg
tacagcttggtggtggaggcgtccgacaataacggcgacggctcggggttgtccagcacg
acggccgtcacgatcgccgtgggggacatcaacgacaacccgcccatcttctccgagaac
atgttcaccggcaaggtggaggaaaacaagaaggatgtggtgatcggccgcgtgaaggtg
acggatgccgacctggtgaacacgccagcgtggcgcgcgcgctacttcatcgtcagcggc
aacgaggccggcaacttcgccattgagacagaccccgtcaccaacgagggcatcgtcaag
ctcatcaagcccttggactacgagatgacgtcatcgcagtcgctgtcgatccgcgtagag
aacgagattgcgctcgttagcggcagcagctcctccagctccatgagcatctcggggggt
ggcggcggtggtggcggcggtggtggcggcggtggtggcggcggaggtggtggcggcggc
agcagcagcagccacaactccatgtccatgttcttggtggacgtgctggacgtggacgag
cggcccgtgttcgcgcccaacatgatccgcgtggaccggctcgagggccaggccacaggg
cagagcctcgccaagttcaaggcatcggcaccgacctccgtgcccgggggtgcctcccac
gtcatgcggtacggcaagctgaacgacccggctaattggctggagatcgacccggtgacg
ggagacatccgcacgcgggcgccgctcgaccgcgaatcaccccacgtggtgaacaacacc
tacacggcgaccttctccgtcgtggacgagacgtctccgtcgggcacgaacacggggacg
atcgtcatcaaactcgacgacaacaacgacaacgcaccggacgtggtgacgcgcaacgtg
agcgtgtgcgagacggggcccgactacgtcacggtgacggccagcgaccccgacacggat
atcaacggcaagcccttcaccttcgagctgcccgccgactccgcgtggaccgtctccgag
accgacggcacctccgccgtcctcaaataccgctcccagcgcatcccccgcggcgtgcac
gccgtgccgctcatggtacgcgaccggctgggcctgggcgaggtgcgcaacgtcaccgtg
tcgtcgtgcccctgcgagccggggtcctccgagccctcctgcgaggccgtcggggtcgcg
gggtcgcgcgcgggggggctctccgacggggccctggcagggatcctcgcggggatcctg
ggcttcctcatgctcggaatcctgctgctgctctgctgctgcaagtttggcaagaagcag
accctcatcgggaaactcatgggggagcttcccaagagctccctgtcgacctccacgcgc
ggggaggagcaggacaaggcactgggcgggatgcaaggacacagcgagagcgttccgctc
gtcacaaaaagctccggcagtgccaacttctcctccagcaaggtcaccaaggaaaagttc
gtgaaccagtccgtgacggagagcaagttcgggctcaaccagggccggtcgttcgccaaa
ggcgccggagcggcaggggcagccgcaggggcagccgcaggggcagccgcaggggcagcc
ctcggggcgggcttgggggcaggcatgggggccggagcgggcggaggggccggagcgatg
agaggcggtgcttacgtggagagcagtgcggctggaaacatgaccaatggacacatgggc
gcctcccacagctccgtatcagacactgagatggacggctcgggctacatgggcaatgcg
ggcggcggtggcgggaggccaatcaccacgctcgcacgtagatcttgcgtcaacggcggt
atagacatgcagcagcagggtggctttgcagattactttggggaaaccatgcaacactcg
gacatgaacttaatggagagtgggggacagatgggccagggcggaggagacacagcctac
ttcatgacagagagcctcaagatcctggaccaggatgttgctgctccggacacactgctc
atcttcaaccaggagggcaccatgggcggctcccagttctcccttgtgtgccaagacatg
ctgtaa
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