Petromyzon marinus (sea lamprey): 116945945
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Entry
116945945 CDS
T09614
Symbol
KARS1
Name
(RefSeq) lysine--tRNA ligase isoform X1
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
116945945 (KARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pmrn01007
]
116945945 (KARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmrn03016
]
116945945 (KARS1)
Enzymes [BR:
pmrn01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
116945945 (KARS1)
Amino acid related enzymes [BR:
pmrn01007
]
Aminoacyl-tRNA synthetase
Class II (A)
116945945 (KARS1)
Transfer RNA biogenesis [BR:
pmrn03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
116945945 (KARS1)
Prokaryotic type
Other AARSs
116945945 (KARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
DUF374
Motif
Other DBs
NCBI-GeneID:
116945945
NCBI-ProteinID:
XP_032816540
UniProt:
A0AAJ7TGJ9
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Position
25:complement(9384640..9399232)
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AA seq
615 aa
AA seq
DB search
MLSRAVGGLFSGRSGEAAWAVWRVCAGQRLSCTMAPHTSGGISKTSELKRRQKAAQKAAE
KEAKAREVAEKQPAEGHGKADGAASCLQEDEEILDPNQYYKIRTQAVQNMQASGDDPYPH
KFQVDLSLTEFVERYSNLQPGDHLTDISLAVAGRLHAKRASGAKLLFYDLRGEGVKLQVM
ANATFYKTEKDFFLTNNKLRRGDVVGVRGNPGKTKKGELSIVPSEMVLLSPCLHMLPHLH
FGLKDKETRYRQRYLDLILNDYVRQKFIVRAKIINYVRHFLDSLGFLEVETPMMNIIAGG
AAARPFITHHNDLNMDLYMRIAPELYLKMLVVGGMDRVYEIGRQFRNEGIDLTHNPEFTT
CEFYMAYADYNDLMEITEKLLSGMVKHITGGFKIVLHPDGPEGEGVEVDFTPPFRRLSLI
GDLERVLDTKLPAADTLSTEEARLAVDKLCVEKGVECPAPRTMARLLDKLVGEFLEVTCV
NPTFICDHPQIMSPLAKWHRKVKGLTERFELFVMKKEVVNAYTELNDPLRQRQLFEEQAN
AKAAGDDEAMLIDETFCTALEYGLPPTAGWGMGIDRLTMFLTNSNNIKEVLLFPAMKPEE
HKKESPAAAEPALQQ
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcccgggcggtgggcggcctgtttagcgggcggtctggggaggccgcctgggcg
gtgtggcgagtgtgcgccggccagcggttgtcatgtacaatggccccacacacgtctgga
ggcattagtaaaacaagtgagctgaagaggcggcaaaaagcagcccagaaagcggccgag
aaggaagccaaggcccgcgaggtggccgaaaagcagccggcggaaggtcatggcaaggct
gatggggcggcctcttgtctgcaggaggatgaggagatcctggaccccaatcaatactac
aagatccgcacgcaggccgttcagaatatgcaggcatctggagatgacccgtacccacac
aagttccaggtggatctgtcgctcacggagtttgtggaacgctactccaacctgcagcct
ggcgatcaccttacagacatcagcctggcggtcgcaggaagactccatgccaagcgagcg
tcgggggccaagctgctgttctatgacctccgtggcgagggggtgaaacttcaggtcatg
gccaatgccacattctacaaaacggaaaaggacttcttcctcaccaacaacaagctacgg
cgcggcgacgtggtgggcgtgcgtggaaatccgggcaagaccaagaagggggagctgagc
atcgtgccgtccgagatggtgctgctgtcgccctgcctgcacatgctgccacacctgcac
tttggcctcaaggacaaggagacccgctaccgccagagataccttgatctgatcctcaac
gactacgtgcggcagaaattcatcgtccgtgccaagatcatcaactacgtccgtcacttt
ctggacagcctcggattcctggaggtggagacgcccatgatgaacatcattgctggagga
gcagcggcccggccattcatcacgcaccacaacgatctcaacatggacctgtacatgagg
attgctccggagctttacctcaagatgctggttgtgggtggcatggaccgcgtgtacgag
atcgggcggcagttccgcaacgaggggatcgaccttacgcacaaccctgagttcacaacg
tgcgagttttacatggcctacgccgactacaacgacctcatggagatcaccgagaagctt
ctgtccggcatggtgaagcacatcacgggaggtttcaagatcgtgctgcacccagatggt
ccggaaggcgagggcgtggaggtggatttcacgccgcccttccggcgactcagcttgatc
ggcgacctggagcgagtgctggacaccaagctgccggctgcagacacgctgagcacggag
gaggcacgcctggctgtggacaagctgtgtgtggagaagggggtggagtgcccagcccca
aggaccatggccagacttctcgataaactggtgggcgagtttctggaagtcacctgcgtc
aaccccaccttcatctgtgaccatccgcagatcatgagccccctggccaagtggcaccgc
aaggtcaaaggcctgacggagcgcttcgagttgttcgtgatgaagaaggaggtggtgaat
gcctacacggagctgaacgatccgctgaggcagaggcagctgttcgaggagcaggccaat
gcgaaggcagccggtgatgacgaggccatgcttatcgacgagacattctgcacggcgctg
gagtacgggctgccccccacggccggatggggcatgggcatcgaccgcctcaccatgttc
ctcaccaactccaacaacatcaaggaggtgctgctcttcccagccatgaaacccgaggaa
cacaagaaggagagcccagcagcagctgaaccggcactccagcagtga
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