Petromyzon marinus (sea lamprey): 116946000
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Entry
116946000 CDS
T09614
Symbol
VPS35
Name
(RefSeq) vacuolar protein sorting-associated protein 35
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116946000 (VPS35)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmrn04131
]
116946000 (VPS35)
Membrane trafficking [BR:
pmrn04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
116946000 (VPS35)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
FerA
Motif
Other DBs
NCBI-GeneID:
116946000
NCBI-ProteinID:
XP_032816656
UniProt:
A0AAJ7TEV2
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All DBs
Position
25:12292886..12308094
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AA seq
792 aa
AA seq
DB search
MGSAQEEQEKLLDEALQVVKVQSFQMKRCLDKNKLMDGLKHASNMLGELRTSMLSPKCYY
ELYMAVTDELHHLEVFLIDEFTKGRKVADLYELVQYAGNIIPRLYLLVTVGVVYIKTFAQ
SRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNVLPDEGEVTDDKATGEIGDSLDFVL
LNFAEMNKLWVRMQHQGHSREKEKRERERQELRILVGTNLVRLSQLEGVNVDRFKQVVLP
GILEQVVNCRDAIAQEYLMECIIQVFPDEFHLQTLNLFLRACAELHQNVNVKNIIIALID
RLALFAHREDGPGIPQEVKLFDIFSQQVATVIQSRQDMPTEDVVSLQVSLINLAMKCYPD
RVDYVDKVLQTTADIFGKLNLEHVATSSAVSKELTRLLKIPVDSYNNVLTILQLKHFRPL
FEYFDYQSRKNMSCYVLGNALEHDTNVPMQDQVDSLLTLVSSLVQDQPDQPTEEPDPEDF
AEEQGLVGRFIHLLKAESPDQQYLILNTARKHFGAGGNQRIRHTLPPLVFAAYRLAFWYK
ECAQMDDKWEKKCQKIFTFCHQTIGALIKAELAELPLRLYLQGALAAGEIAFENHETVAY
EFMSQAFSLYEDEISDSKAQLAAITLILGTLERCHCFSEENHEPLRTQCALAASKLLKKP
DQCRAVTVCSHLFWSGRTTESGGNELRDGKRVMECLKKAVKIANQCMDTSLQVQLFTEIL
NRYIFFYEKGNEAVSIQVLNQLIQKIREELPNLESNEETEHLSKHFQNTLEHLRLRQESP
ESDGPSYDGLVL
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgggatctgcccaggaagaacaagagaagctgctggatgaggccctgcaggtggtgaag
gtgcagtccttccagatgaaacggtgcctggacaagaacaagcttatggatggactgaaa
catgcatctaacatgctgggggagctccgtacatcaatgctgtctccaaagtgctactat
gagctgtatatggctgtgacagatgagcttcatcacctggaggtgttccttattgacgag
ttcacgaagggtcggaaagtagccgatctctatgaactggtgcaatatgccggaaacatc
atcccccgtctgtacttgctggtgactgttggggtggtctacatcaagacatttgcgcag
tcacgcaaagatatattaaaggacctggtggagatgtgcaggggagttcaacatccactg
cgcggactctttttgagaaactacctgctgcagtgtacacgcaacgtgctgccggatgag
ggagaggtcaccgatgacaaggcgacgggtgagatcggagactcgctggacttcgtgctg
ctcaactttgcggagatgaacaagctgtgggtgcgaatgcagcaccaggggcacagccgt
gagaaggagaagcgcgagcgcgagcggcaggagttgcgcatccttgtcggtaccaacctg
gtgcggctcagccagctggagggcgtcaatgtggacaggttcaagcaggtggtgctgccc
ggaattctggagcaagtagtgaattgtagggacgccatcgcacaggagtacctgatggaa
tgcatcatacaggtgttccctgatgagttccacctccagaccttgaatctcttcctccga
gcatgtgccgagcttcaccagaatgtcaatgtcaagaacattattatcgccctgattgac
agactcgctctttttgcacaccgtgaggatgggcctggcattccacaagaagtcaagttg
tttgacatcttctcgcagcaggtcgcaactgtcattcagtctaggcaagatatgcccacg
gaggatgtggtgtcactacaagtgtctctgatcaacctggcgatgaagtgctacccagac
cgtgtggattacgtggacaaggtcctgcagactacagctgacatttttggcaagctcaac
ctggagcatgttgcgacgagcagtgccgtgtccaaggagctgacgcgtctactaaagatc
ccggtggactcgtacaacaacgtgctcaccatcctgcagctgaagcacttccgcccgctg
ttcgagtactttgactaccagtcgcgcaagaacatgagctgctatgtgctgggcaatgcc
cttgagcatgacaccaatgtccccatgcaggatcaggtggactcgctgctgaccctcgtc
tcatcgctggtgcaagaccagccagaccagccaactgaggagccggaccccgaggacttt
gccgaggagcagggcctggtggggcgcttcatccacctgctcaaagctgagagccctgac
cagcagtacctgattctcaacacggcgagaaaacactttggagccggaggaaaccaaaga
atacggcatactctgccacccctggtttttgctgcttacagactggccttctggtacaag
gaatgtgctcagatggatgacaagtgggaaaagaaatgccagaagatcttcacattctgt
caccaaaccatcggtgcactgatcaaggcagagcttgcggagcttcctctgcgcctttac
ctccagggggctcttgcagctggagagattgccttcgagaaccacgagacggtcgcttac
gagttcatgtcacaggcgttctcgttgtacgaggatgagatcagcgactcgaaagctcag
ctggcagcaatcacactcatcctgggcactctcgagcgctgccactgcttctcagaggag
aaccacgaacccctgcgcacgcagtgcgccctcgcggcctccaagctgctcaagaagccc
gaccagtgccgtgcagtcaccgtgtgctctcacctcttttggtctggccgcaccactgag
tcaggtggcaatgagctccgtgatggcaaacgggtgatggagtgcctgaagaaagctgtg
aagatcgccaaccagtgcatggacacctccttgcaggtccagctcttcacagagatcctc
aacagatacatattcttctatgagaagggaaatgaagctgttagcatccaggtgctgaac
caactcatccaaaagatccgggaagagcttcccaacctggagtccaacgaggagacagaa
cacctgagcaagcactttcagaacacgctggagcacctgcggctgcgacaggagtctcct
gaatctgacgggccctcctacgacggccttgtcctgtaa
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