Petromyzon marinus (sea lamprey): 116946068
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Entry
116946068 CDS
T09614
Name
(RefSeq) xylosyltransferase 1-like
KO
K00771
protein xylosyltransferase [EC:
2.4.2.26
]
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
pmrn00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
pmrn01100
Metabolic pathways
Module
pmrn_M00057
Glycosaminoglycan biosynthesis, linkage tetrasaccharide
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
116946068
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
116946068
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pmrn01003
]
116946068
Enzymes [BR:
pmrn01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.26 protein xylosyltransferase
116946068
Glycosyltransferases [BR:
pmrn01003
]
O-Glycan biosynthesis
Glycosaminoglycan
116946068
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xylo_C
Branch
Motif
Other DBs
NCBI-GeneID:
116946068
NCBI-ProteinID:
XP_032816793
UniProt:
A0AAJ7TF47
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Position
26:3444682..3494488
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AA seq
1318 aa
AA seq
DB search
MVASSSAVPALRGLRHRRCLGYQLLWFSECGPIEFELHLEQWFSECGPIEFELHLEQWFS
ECGPIEFELHLEQWFSECGPIEFELHLEQWFSECGPIEFELHLEQWFSECRPIEFELHLE
KWLSECGPIEFELHLEQWFSECGPIEFELHLEQWFSECGPIEFELHLEQWFSECRPIEFE
LHLEQWFSECGPIEFELHLEQWFSECGPIEFELHLEQWFSECRPIEFELHLEQWLSECGP
IEFELHLEQWFSECGPIEFELHLEQWFSECGPIEFELHLEQWFSECRPIEFELHLEQWFS
ECRPIEFELHLEQWFSECGPIEFELHLEQWFSECGPIEFELHLEQWFSEWQWWRLWSERG
ERGGGGGGGDAAAAAAAAAASRTSGRGGRRRGEPRRRETWKRRAAGATRDVRGSSAMARK
CVRRHRPAVVAAVTALLLLQTLALWSFGGLDDRDAAAAAAADKAAARPARAAGDGGRDAR
FGGAEAEAVAPRGPRAPILQQQQQVRELGERRGREGKNRIKEFPKKIDSNNENSVPKDFD
SIDNSNLLHSKLYQTSKDAGKESSKSLKLFPLSWQSSEIASSRSATDVRATSNRVGDARA
EEASHRDDADYVPKCEIAGKEALSALSRARSAQCKQEIADVVCLHQEGKLMPESLPRFCP
IEGKPVQNIAWSDEVALGLVPPNPVRIVFVLVVHGRAIRQLSRMLKAIYHRDHYYYIHVD
KRSNYLQRQVLQVAERYPNVRVTPWRMATIWGGASLLTMYLRTMKDLLDMADWAWDFFIN
LSATDYPIRTNDQLVAFLTKYRDKNFLKSHGRDNNRFVKKQGLDRIFYECDTHMWRLGDR
KIPDGIVVDGGSDWFALNRPFVEYVMRSQGELVSELKRFYAYTLLPAESFYHTVLENSEH
CGSLVDNNLRITNWNRKLGCKCQYKHIVDWCGCSPNDFKPQDFHRFQQMARPTFFARKFE
SAVNQEVIEQLDSYLYGSYPSGTPSIKAYWENVFDEPDGVESLSDVTLTAYHSFMRLGLQ
RTAMSWHNHQDDACRYEPVGHPISVHVYFHADHFQGYLVQQKAQNLGTGRLETLEAWLMP
RKVFSALDIPSDPARLLNLEISTDWDPKERIFRNFGGLMGPFDEPIALQKWSRGANTTAT
VVWVDPTNVIAATYDILVETDADYTSYKPPLNLPLRPGVWTVKVLHQWAPVAETKFLVTP
LLFNNKQPIRRDEVLQAHSGPPNNMYLEQSFQGLMGLLSVPERTDLAEEARQHAGLTGAA
LREWTDALVSELWSAVDTCSLGAPGCPAIQACALSNWSSLYPDPKSDLGTVKPDGRLR
NT seq
3957 nt
NT seq
+upstream
nt +downstream
nt
atggtggcatcgtcgtcggcggtacccgcgctcagggggcttcgccaccggcgctgtctc
ggctaccaactgctgtggttctcagagtgtggtcccattgagttcgagttacatctggag
cagtggttctcagagtgtggtcccattgagttcgagttgcatctagagcagtggttctca
gagtgtggtcccattgagttcgagttgcatctagagcagtggttctcagagtgtggtccc
attgagttcgagttacatcttgagcagtggttctcagagtgtggtcccattgagttcgag
ttacatctggagcagtggttctcagagtgtcgtcccattgagttcgagttacatctggag
aagtggttatcagagtgtggtcccattgagttcgagttacatctggagcagtggttctca
gagtgtggtcccattgagtttgagttacatctggagcagtggttctcagagtgtggtccc
attgagttcgagttacatctggagcagtggttctcagagtgtcgtcccattgagttcgag
ttacatctggagcagtggttctcagagtgtggtcccattgagttcgagttgcatctagag
cagtggttctcagagtgtggtcccattgagttcgagttacatctggagcagtggttctca
gagtgtcgtcccattgagttcgagttacatctggagcagtggttatcagagtgtggtccc
attgagttcgagttacatctggagcagtggttctcagagtgtggtcccattgagttcgag
ttgcatctagagcagtggttctcagagtgtggtcccattgagttcgagttacacctggag
cagtggttctcagagtgtcgtcccattgagttcgagttacatctggagcagtggttctca
gagtgtcgtcccattgagttcgagttgcatctggagcagtggttctcagagtgtggtccc
attgagttcgagttacatctggagcagtggttctcagagtgtggtcccattgagttcgag
ttgcatctagagcagtggttctcagagtggcagtggtggcggctgtggagcgaacgcggt
gagcgcggaggaggaggcggaggaggagacgcggcggcggcggctgcggcggcggcggca
tcgaggacaagcggacgcggtggtcggcggcggggggaaccccggaggcgagagacgtgg
aagcgacgcgcggcgggcgcgacgagagacgtgcgcggctcgagcgccatggcgcgcaag
tgcgtgaggaggcacaggccggcggtggtggccgccgtgacggctctgctgctgctgcag
accctggcgctctggagcttcggcggcctcgacgacagagacgcggcggcggccgcagcg
gccgacaaggcggcggccaggccggcgcgggcggccggggacggcgggagggacgcgcgg
tttggcggcgccgaggctgaggcggtggcgccgcgcggaccccgcgcgcccatcctgcaa
cagcagcagcaggtccgggagctcggggagcggagaggccgcgagggaaaaaatagaata
aaggaattcccgaagaaaattgacagtaacaatgagaactctgttccaaaggactttgac
agtatagacaacagcaacctgttgcacagcaagctgtaccaaacatccaaagacgcaggc
aaggagagcagcaagtcactgaagctgttcccgctcagctggcagagctcggagatagcc
agcagccgcagcgccacggacgtccgagcgacgagcaacagagtgggtgacgcccgggcc
gaggaggcctcgcaccgtgacgacgccgactatgtgcccaagtgcgagatcgcgggcaag
gaggcgctgtcggcgctgtcgcgagcgcgcagcgcccagtgcaagcaggagatcgccgac
gtggtgtgcctacaccaggaggggaaactcatgcccgaatcgctgcctcgattctgcccc
atcgaaggcaaaccggtgcagaatatcgcgtggagcgacgaggtggcgctcggactggtt
ccgccgaatcctgtgcgcatcgtcttcgtgctggtggtgcacggccgtgcgatccgccag
ctctcgcgcatgctcaaggccatctaccaccgcgaccattactactacattcacgtcgac
aagcgttccaactacctgcagcgccaggtgctgcaggtagcggagcgctacccgaatgtg
cgcgtcaccccgtggcgcatggccaccatctggggtggcgccagcctgctcaccatgtat
ctgcgcaccatgaaggacctcctggacatggccgactgggcctgggatttcttcattaac
ctcagcgccaccgactacccaatccgaacaaatgatcagctggtggcattcctcacgaaa
tacagagacaaaaatttcctaaaatcccatggccgagacaacaacaggtttgtgaaaaaa
cagggtctcgacaggatattctacgagtgcgacacgcacatgtggcgcctgggcgatcgc
aagatacccgatggcatcgtggtagacggtggctcggactggttcgccctcaatcggccc
tttgtcgagtacgtaatgcgctcccagggagagctggtgtcggagctcaagcgtttctac
gcctacaccctcctgcctgccgagtcattctaccacacggtgctggagaacagtgagcac
tgtggcagccttgtggacaataatctgcgcatcaccaactggaaccgtaaactcggctgc
aagtgccagtacaagcacattgttgactggtgtggctgctcacccaacgacttcaagcct
caggatttccaccgtttccagcaaatggcccggccgacgttctttgcacggaagttcgag
tcggctgtgaaccaagaggtgatcgagcagctggactcgtatctgtacggcagctacccc
agcggcacgccgtccatcaaggcttactgggagaatgtgtttgacgagccagacggcgtg
gagagcctcagtgatgtgactctcaccgcgtaccactcgttcatgcgactgggtctgcag
cgaacggccatgagctggcacaatcaccaggacgacgcttgccgatacgagccagtgggc
caccccatctctgtgcacgtgtacttccatgcggatcacttccagggctaccttgtgcag
cagaaggctcagaacttgggcacgggccgcttggagacgctggaggcctggctgatgccg
cgcaaggtcttcagcgcgctcgacattccctcagaccccgcgaggctgctcaatcttgag
ataagcacagactgggaccccaaggagcgcatcttccgcaactttggcgggctgatgggt
ccgttcgacgaaccgatcgcccttcagaagtggagtcgcggtgccaacaccaccgccacc
gtggtgtgggtggacccgactaacgtcatcgccgccacctacgacatcctcgtcgagacg
gacgcggactacacgagctacaagccgccactcaacctgcccctgagacctggtgtgtgg
acggtgaaggtgctgcatcagtgggcgccggtggctgagaccaagtttctggtcactccg
ctcctgttcaacaacaagcagcccattcgcagagacgaggtgctgcaggcccacagcggg
cctccgaacaacatgtacctggagcagagcttccagggcctcatggggctgctcagcgtg
cccgagaggaccgacctggccgaggaggctcgccagcacgcgggcctcactggcgccgcg
ctgcgcgagtggacggacgcgctcgtctcggagctgtggtcggcggtggacacgtgctcg
ctgggcgccccggggtgcccggccatacaggcctgcgccctgtcaaactggagctcgctc
taccccgaccccaagtccgacctgggaaccgtgaagcccgatggcaggctgaggtag
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