Petromyzon marinus (sea lamprey): 116946091
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Entry
116946091 CDS
T09614
Symbol
SREBF1
Name
(RefSeq) sterol regulatory element-binding protein 1 isoform X1
KO
K07197
sterol regulatory element-binding transcription factor 1
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
116946091 (SREBF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmrn03000
]
116946091 (SREBF1)
04131 Membrane trafficking [BR:
pmrn04131
]
116946091 (SREBF1)
Transcription factors [BR:
pmrn03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
116946091 (SREBF1)
Membrane trafficking [BR:
pmrn04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
116946091 (SREBF1)
Autophagy
Mitophagy
Other mitophagy associated proteins
116946091 (SREBF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
Motif
Other DBs
NCBI-GeneID:
116946091
NCBI-ProteinID:
XP_032816830
UniProt:
A0AAJ7X0J2
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All DBs
Position
26:complement(290296..332650)
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AA seq
1280 aa
AA seq
DB search
MEAQPPAVAMAFEEHGLDSLDPSLASSNEFDNVLLSEIDEMLQYINTQDGDFPGLFDGQL
STNGGSDTKGSVQPRLTMESTFSQPMARQAQQQPVGLHHHSTQQAQPTGVVQPSPASTHT
APTSHKQLQLTNTQTQIISQLPQATQQRQQQAVVMTQSFAASPTQVHITQPTLLNYSPQG
TLTAVPAQQQIQTVVSTPSLQPVTLQHHLHSVTPTHQFLTTSASPTGISPHVQHVTMTPQ
HLTMTPQQVTMTPQHLTVTPHQVAMTPQQFTMTPHQVTMTPHHLTMTPQHVTMAPHVQQL
TVSPHMHQTIAPQWRCQISCSQMQQVTMAPQAMSVMVSPQQVQQVHNMQQVHNMQQVQRL
AVNAVSMSPQVQQVSSFTMFPQVLLQPQIIKADSVLLTTLKADPGTVVGTPKGPGSGGSA
TAHATPIQTLMSGNAILTTMPMVVDADKLPINRLSASSKPMGLPNKGEKRTAHNAIEKRY
RSSINDKIVELKDMIAGSEGKVTISAGQLNKSSVLRKAIEYIRYLQQSNQKLKQENLVLK
MAAQKGHTLKELVDVGITPMDTLEGTPLSSDLKAEPLGLPTPPNSDAGSSPNRSNSPFSS
DSEPDSPYYDDSKLQIKEEPGSPGGLTMVDRSRVLLCGFLFLCLSVNPLGFLLRATGLVS
NQMHYPGRSILSFNDGPESWWDWLMPTLLLWLVNGVLALAVLARILVYGEPVMRPHSPAA
LLFWRHRKQADMDLARGEFVAAAENLRVSLKAAGRPLPASPLDLACSLGWGLLRHLLQRA
GLGRWLACRAGSLRADPGTRADACKGMRDVALVYHKLHQLHMTGKLEEGHAWAVTVALSA
VNLAECAGETLPADTLAQVYVTAALRIKTSFPLRTHFLARYFLSGARQVCLNQSGTVPPA
MQWLCHPLGHRFFVDGGWCVRSQPLQSCYSTSANLVDPLAQVAQAFREHLLERALGTIFR
PGDGEQGPCEPGEFSEALQYLQLLTECANAAVVTKQTYAIGSNMTAVTGMDPVAKWWAAV
VMVAIHWVRGDDEAAERLYSVAECLPSELKLARSLLPQAVLLAMQACRALLIGRKDHCDA
CLAMCECAGGLLRDHLAVALHCTQGPIDKAMALLVCDMLLSTRTHAWQKTASAQAGAGTA
PPAEIRGFQQDLTSLRRIAQGFPPAHRKMFLHEATARLMAGACPTRTQRLLDNSLRRRVT
PATTAKESREWDSQPGQRERASALVMACRYLPPSFLSAPGEREAMLAEAARAMESAGDKR
GLRECQKLLLRLGSGSTLAN
NT seq
3843 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgcagcctcccgcggtggccatggcgttcgaggagcacgggttggacagtctg
gacccgagcctcgcttcgtcgaatgagttcgacaacgtcctgctcagcgaaatcgacgag
atgctgcaatacatcaacacccaggatggtgacttccctgggctgtttgatggacaatta
tccacaaatggtggctcggatactaaaggctccgtgcagccccgcttgaccatggagagc
accttctcacagcccatggcccgccaagcccagcagcaaccagtgggattgcatcaccac
agcacccagcaagcacagcccacgggagtggtgcagccttcacctgcttctacacacacg
gctcccacttcacataagcagctgcagcttaccaacacccagacccagatcatatcccag
ctgcctcaggccactcagcagaggcagcagcaagcggtggttatgacacagagcttcgcg
gccagccccacgcaagtgcacatcacgcagcccaccttactcaactactccccgcaaggc
acgcttacagctgtaccagcgcagcagcagatacagacggtcgtgagcacgccctccctc
cagcccgtcacccttcagcaccacctacacagcgtcacgcccactcaccagttcctcacc
acttccgctagccccaccggcatctcacctcatgtgcagcacgtcactatgacgccccaa
cacctcaccatgaccccgcagcaggtcaccatgaccccacagcacctcaccgtgacccca
caccaggtcgcaatgactccgcagcagttcaccatgaccccacaccaggtcaccatgacc
ccgcaccacctgaccatgacaccacagcacgtgacaatggcgccgcatgtgcagcagctg
accgtctcgccgcacatgcaccagaccatcgcgccgcagtggagatgtcaaatctcgtgt
tcgcagatgcagcaggtgacgatggcaccccaagcgatgtcggtgatggtatccccacag
caagtgcagcaggtccacaacatgcagcaggtccacaacatgcagcaagtgcagcgtctg
gctgtcaatgctgtcagcatgtctccacaggtgcagcaggtgtcctcttttactatgttt
ccacaggtgttactgcagccccagatcatcaaagcggactctgttctactgacgacgctc
aaggcagaccctggtacggtggtgggcaccccaaagggtcctggcagtggcggcagcgca
acagcgcacgccacacctattcagacgctgatgagtggaaacgcgatcctgaccacgatg
cccatggtggtggatgcggacaagctgccgatcaaccgcctgtcggcgagcagcaagccc
atggggctgcccaacaagggggagaagcgcacggcgcacaacgccatcgagaagcgctac
cgctcctccatcaatgacaagatcgtcgagctgaaggacatgatcgccggcagcgagggc
aaggtaactatctcggcggggcagctgaacaagtcatcggttctccgcaaggcgatcgag
tacatccgctacctgcagcagtccaaccagaagctcaagcaggagaaccttgtcctcaag
atggcagcgcagaaaggacacaccctgaaggagctggtggatgtgggaataactcccatg
gacaccctggaggggacgcccctgagcagcgatctcaaagcggagcccctggggctgccc
acaccacccaactcggacgccggaagctctcccaaccgcagcaacagtcccttttcgagt
gactcggagccagacagcccctactacgacgacagcaagctgcagatcaaggaggagcca
ggctcgcccggcgggctgaccatggtggaccgctcccgcgtgctactctgtggcttcctg
ttcctgtgcctctctgtcaacccactcggattcctgctccgtgccacagggctggtgtcc
aaccagatgcactacccaggccgcagcattctctcattcaacgatgggcccgagagctgg
tgggactggctgatgccaacattgctgctgtggctggtgaatggggtgctggctctggct
gtcctggcgcggattctcgtgtacggtgaaccggtgatgcggccacattcgcctgccgca
ctgctcttctggaggcatcggaaacaggccgacatggacctagccaggggggagtttgtc
gcggctgccgagaacctgcgtgtgagcttgaaagcggcgggccgtccactgccggcctcg
ccgctcgatctcgcgtgtagcctgggctggggcctgctgcggcacctgctgcagcgtgcg
ggactgggccgctggctggcttgccgtgccggctcgttacgcgccgaccctgggacccgt
gccgacgcgtgcaagggcatgcgcgacgtcgcactcgtctaccacaagctgcaccagctg
cacatgacgggcaagctggaggagggccacgcttgggcggtgaccgtggcgctgagcgct
gtcaaccttgcagaatgcgcgggcgagaccctcccagccgacacgctcgcccaagtctat
gtcacggccgccctacgcatcaagaccagctttccgctccgcacgcacttcctggcccga
tacttcctgagcggtgcacggcaggtgtgcctgaaccagtcaggcacagtgccacctgct
atgcagtggctgtgccaccctctgggccaccgcttctttgtggacggtgggtggtgcgtt
cgcagccagcccctgcaaagctgctactccacgtcggctaatctggtggaccccctggca
caagtggctcaggctttccgggaacacctgcttgagcgagcgttgggaaccattttccgg
ccaggcgatggcgagcagggtccatgcgagcctggggagttctcagaagcactgcagtac
ctgcagctgctcacggagtgcgccaatgccgccgtcgtgaccaagcaaacctacgccatc
ggctccaacatgaccgccgtcacgggcatggatccggtggccaaatggtgggcagccgtg
gtgatggtggccattcattgggtgcgtggtgacgacgaggcggccgagaggctctactcc
gttgctgaatgcctcccctccgagctgaagctggcgcggagcctgctgccgcaggcagtg
ctgctggccatgcaggcttgccgtgccctgctcataggccgcaaggaccactgtgacgcc
tgtctggccatgtgcgagtgcgctggcggcctcctgcgggatcacctggctgtggctctg
cactgcacgcaagggcccatcgacaaggccatggctctgcttgtgtgcgacatgctgctg
agtacacgtacgcacgcgtggcaaaagacggcgagcgcccaggccggtgcgggcaccgcg
ccgcccgcggagatccggggcttccagcaggacctgacaagcttgcgccgcatcgcgcag
ggcttcccgcccgcgcataggaagatgtttttgcacgaggccaccgcgagactgatggcg
ggcgcctgcccaactcgcacacagcgtcttctcgacaacagcttgcgccggcgcgtcact
cctgccaccaccgcgaaagaaagccgcgagtgggacagccagcccgggcaacgcgagcgc
gcctccgccctggtgatggcgtgccgctacctgccgccctctttcctatccgcgccgggc
gagcgcgaggccatgttggccgaggccgcgcgtgcaatggagagcgcgggggacaagcgc
ggtctgcgcgagtgccagaagctgctactgcggctgggcagcgggagcacgcttgccaac
tag
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