Petromyzon marinus (sea lamprey): 116946204
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Entry
116946204 CDS
T09614
Name
(RefSeq) rab11 family-interacting protein 4B-like isoform X1
KO
K12485
Rab11 family-interacting protein 3/4
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116946204
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmrn04131
]
116946204
Membrane trafficking [BR:
pmrn04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
116946204
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RBD-FIP
EF-hand_9
EF-hand_7
EF-hand_6
DUF5956
Motif
Other DBs
NCBI-GeneID:
116946204
NCBI-ProteinID:
XP_032817073
UniProt:
A0AAJ7TFT7
LinkDB
All DBs
Position
26:complement(5148838..5210169)
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AA seq
923 aa
AA seq
DB search
MEVGPRGGLWDVFSACDEDGDGWVDVGHFVRLAASHLPSEQEAVALGRLLDPKGLGLIDF
DAFCRGVSAFGGAGGTAHLADKEHHDGDDEDCDHGDDDDDGRRDGYNGGLGPDWDEVGEV
TDSAYLGSESAPSETETLPDEETSVTTREQHQQWQQWEVAPSPEEHPKDHDRRPRHSRKA
ASAESGAPADLGDAFESRAPADLGDAFESRAPADLGDAFESRAPADLGDAFGYLQMGGES
ASPSHAELGLPGAEEEEGGAGPVCGDRPRHGGTPGPDATASTPPGSGSQPGVGARVGRGD
LPGRHAPDAGYLSRASSAAAVDGSRDVPGGRGVGGEAPLPSDASQSTEPTGSSDRRRRDA
TGDLGEGEDSPRAVGRGDLPEAWFESGSRQGLRNSPRIGDGGQPRTSGRGRDPDGAQDGG
ASAGDFSEVGAGAAPSETRGLNHASDHRRHYHHAVPGHREEDQEWGRSDGTGPEPNPAVN
GVEEFEESGDGEEATAAAVRAPRRHDLSASDTWSLRAPSYGSRFSTSSPASAGEPGGRQG
ARGEDGDEGEGSYCLCCRQRIARLKELDRRLTQLHLTGPRQRISTKAFARRLQPGGHRKS
ASCSNQEDFFGESPDTGSEVNQRMSLLESKVLELESDSVITCDLQTQIKQENTTLIHRIN
ELEDRLRETEVRSELRSHEVSLRHQEVLARVERHKLSELEALRARLLQVEEEGSALKATV
AHLKTLAHRLTEEKEALAERLEESVCRLSEEVTLGRTLADKLRQDEQRFQHEHVATHELI
EELRRELEGLQLLRLEAERGTALGGARRRLGSSTGLQEYQARTREVELEHEVRRLRQERQ
RLQEQNEDLSGQIISTSLQGAKSLLSVPTRSQALASNPDGATHEEVVAALHEVEEINDQL
RQYMDRVILAILETNPSILEVKP
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atggaggtggggccgcggggcggcctctgggacgtgttctccgcgtgcgacgaagacgga
gatggctgggtggacgtggggcacttcgtgagactcgcggcgtctcacctgcccagcgag
caggaggcggttgccctggggaggctgctggaccccaaggggctgggcttgatcgacttc
gacgccttctgccgcggggtctccgcgttcggaggagcaggtggaaccgcacatctggca
gataaggagcatcatgatggggatgacgaggattgtgatcatggcgatgatgatgatgat
ggtcgacgtgatggctacaacgggggccttggcccggactgggatgaggtgggggaagtc
acggacagcgcgtacctgggctcggagagtgcgcccagcgagacggagacgctacccgac
gaggagacgagcgtcacaactcgggagcagcaccagcagtggcagcagtgggaggtcgct
ccctctcctgaggagcatccgaaggatcacgaccgccgtccgcggcacagccgcaaggcg
gcgagcgccgagtccggagcccccgccgacctgggagacgccttcgagtccagagccccc
gccgacctgggagacgccttcgagtccagagcccccgccgacctgggagacgccttcgag
tccagagcccccgccgacctgggagacgccttcggctacctgcagatgggtggcgaatcc
gcctcgccctcgcacgcggagcttggactcccgggggcggaggaggaggaggggggcgcg
ggccccgtctgcggggaccggccccgacacggtggaacgccggggcccgacgcgaccgcc
tccaccccgccggggtcggggagccaacccggcgttggcgctcgcgtcggtcgcggcgac
ctcccaggccgccacgcgccggacgcaggttacttgtcgagggcttcgtccgccgccgcg
gtcgatggcagccgcgatgtgccgggcgggcgcggcgtggggggcgaggcgccgctcccc
tctgatgcaagtcaatcgaccgaacccacgggcagcagcgatcgccgccggcgagacgcg
acgggagatttgggcgaaggagaggattctccgagagccgtcggtcgcggtgacctccca
gaggcctggttcgagtctggttcccgccagggtcttcggaactcgccccgcattggcgat
ggaggtcagccgcggacgtccggcagaggacgggacccggacggtgcccaggacggaggc
gccagcgccggcgacttttctgaagttggcgcgggggctgcgccctctgaaacgcgcggt
ctcaatcacgcaagcgaccaccgccgccattaccaccacgcagtgccggggcatcgcgag
gaggaccaagagtgggggagatccgacgggaccggtccagagccgaacccagcggtgaac
ggagtggaggagtttgaggaaagcggcgacggtgaggaggcgacggcggcggcggtgagg
gcacctcggagacacgacctctccgccagcgacacctggtcgctccgggcgccgtcctac
ggctcgcggttctccacctccagtccggccagcgcgggggagccgggcgggaggcagggg
gcgaggggcgaggatggcgacgagggcgagggctcctactgcctctgctgccgacagagg
atcgctcggctcaaggagctcgacaggagactcactcagctgcacctcaccggaccgagg
cagaggatatccacgaaagcgtttgcgaggcgtctgcagcccgggggacacaggaagtcg
gcgagctgcagcaatcaggaggacttctttggggaaagcccagacacggggagtgaggtc
aaccaaaggatgagcttgctggagagcaaggtgctggagctggagagtgactcggtcatc
acgtgcgacctgcagacgcagattaagcaagagaacacgactctcatccacaggataaac
gagctggaggatcgtctgcgggagacggaggtgcgctcggagctgcgctcgcacgaggtg
tcactccgccaccaggaggtgctcgccagggtggagcgccacaagctgtcggagctggag
gcactgcgggcgcggctactgcaggtggaagaagagggttctgctctgaaagcgaccgtc
gcgcatctgaaaacactggcacacagactgacggaggagaaggaggcactggcggagcgg
ctggaggagtccgtgtgccgtctgtccgaggaggtgacgctcggccgcacgctcgccgac
aaactgcggcaggacgagcagcgcttccagcacgagcacgtggccacacacgagctgatc
gaggagctgcggcgggagctggaggggctgcagctgctgcggctggaggcagagcggggc
acggcgctgggaggagcgcgcaggaggctcggatccagcacgggcctgcaggagtaccag
gcgcgtacccgcgaggtggagctggagcacgaagtgcggcgccttcggcaggaacgccag
cgtctgcaggagcagaacgaggacctgagcggacaaatcatcagcacgagtctgcaggga
gccaagagcctcttgtcagtgcccacgcgctcacaggcgctggcgagcaaccctgacggt
gctactcacgaagaggtggtggcggcactgcacgaagtcgaggagatcaacgaccagctg
cggcagtacatggaccgcgtcatcctcgccatcctcgagaccaacccctccatcctggag
gtcaagccctga
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